prot_S-ischiensis_contig8.19668.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19668.1
Unique Nameprot_S-ischiensis_contig8.19668.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length175
Homology
BLAST of mRNA_S-ischiensis_contig8.19668.1 vs. uniprot
Match: A0A835Z7T9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T9_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.090e-32
Identity = 86/174 (49.43%), Postives = 104/174 (59.77%), Query Frame = 0
Query:    2 APALLHVALHHNGCKLLLRLLAPDRAKYLDPEEHKLLEPVMVPSKPTAAASTAEGGEGKKADATSSSAEKDGEGD-MVPSSRKDLAVRRRELLAYLRQPLQDMCVAHTEALMRSPYAGSLVLLEVARALPSQELMAAMATAAAAPGRPGGSAKGEAVLPMMEDPTGHIVMKQLL 174
            APALL V+LH NGCKLLL L APD  KYLDPEE  LLEP MVP                        A+ +GE   +V +S+KD  VRR+ELLA+L+ PLQ +C  HT  LMRS +AG+ VLLEV + L + +L+AA+A AA A          E  L M EDP GH+ MKQLL
Sbjct:  613 APALLPVSLHRNGCKLLLYLAAPDATKYLDPEERHLLEPAMVPV-----------------------AQGEGEAPVLVCASKKDPEVRRQELLAFLKAPLQSLCQEHTAELMRSKFAGANVLLEVTKNLRTPDLVAAIAAAAVA-------VPEEGHLAMQEDPAGHLFMKQLL 756          
BLAST of mRNA_S-ischiensis_contig8.19668.1 vs. uniprot
Match: D7FHP3_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP3_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 8.360e-31
Identity = 89/192 (46.35%), Postives = 111/192 (57.81%), Query Frame = 0
Query:    1 PAPALLHVALHHNGCKLLLRLLAPDRA-----KYLDPEEHKLLEPVMVPSKPTAAAS-------------TAEGGEGKKADATSSSAEKDGEGDMVPSSRKDLAVRRRELLAYLRQPLQDMCVAHTEALMRSPYAGSLVLLEVARALPSQELMAAMATAAAAPGRPGGSAKGEAVLPMMEDPTGHIVMKQLL 174
            P   L++V  H NGCKLLLRLLAPDR      +YL PEE +LL+P MVPS P AA               T  GG+G +               +VPSSRK+ +VRRRELLAYLR+PL++ C  +   LMRS  AGS+VLLE  RA+ + E++AA+  AA A    G        LPM EDP+ H+ MKQLL
Sbjct:  519 PGLPLVYVMGHTNGCKLLLRLLAPDRTGYAFFRYLHPEELELLKPTMVPS-PAAAXXXXXXXXXXXXXXXTKAGGQGTEVP-------------LVPSSRKEASVRRRELLAYLREPLREACATYAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKSHVG-------KLPMHEDPSAHLFMKQLL 689          
BLAST of mRNA_S-ischiensis_contig8.19668.1 vs. uniprot
Match: A0A6H5K7W3_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W3_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.930e-30
Identity = 86/186 (46.24%), Postives = 106/186 (56.99%), Query Frame = 0
Query:    1 PAPALLHVALHHNGCKLLLRLLAPDRAKYLDPEEHKLLEPVMVPSKPTAAASTAE------------GGEGKKADATSSSAEKDGEGDMVPSSRKDLAVRRRELLAYLRQPLQDMCVAHTEALMRSPYAGSLVLLEVARALPSQELMAAMATAAAAPGRPGGSAKGEAVLPMMEDPTGHIVMKQLL 174
            P   L+ V  H NGCKLLLRLLAPD   YL PEE +LL+P MVPS P A                  GGEG +               +VPSSRK+ +VRRRELLA+LR+PL++ C  H   LMRS  AGS+VLLE  RA+ + +++AA+  AA    R G        LPM EDP+ H+ MKQLL
Sbjct:  562 PRLPLVGVMCHKNGCKLLLRLLAPDHTGYLHPEELELLKPTMVPS-PAAXXXXXXXXXXXXXXXPKAGGEGTEVP-------------LVPSSRKEASVRRRELLAFLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPQVVAAVVKAACGKPRVG-------KLPMHEDPSAHLFMKQLL 726          
BLAST of mRNA_S-ischiensis_contig8.19668.1 vs. uniprot
Match: A0A7S1CXQ3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXQ3_CYCTE)

HSP 1 Score: 62.0 bits (149), Expect = 3.860e-8
Identity = 51/134 (38.06%), Postives = 66/134 (49.25%), Query Frame = 0
Query:    5 LLHVALHHNGCKLLLRLLAP---DRAKYLDPEEHKLLEPVMVPSKPTAAASTAEGGEGKKADATSSSAEKDGEGDMVPSSRKDLAVRRRELLAYLRQPLQDMCVAHTEALMRSPYAGSLVLLEVARALPSQELM 135
            LL +AL+ N  KL L LL P   +R KYLDP E  +L   + P+   A                         G  VP+SRK+   RR+EL+ YLRQPL  MCV H+E L+ S   G+ V  EV  A   +EL+
Sbjct:  148 LLELALNENASKLFLLLLVPQQENRQKYLDPFERAVL--TLNPTITEA-------------------------GQEVPTSRKNPETRRKELMVYLRQPLIQMCVDHSEELLGS-LPGARVFKEVYAAYRPRELV 253          
BLAST of mRNA_S-ischiensis_contig8.19668.1 vs. uniprot
Match: A0A7S1C698_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C698_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 7.800e-5
Identity = 41/100 (41.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   76 DMVPSSRKDLAVRRRELLAYLRQPLQDMCVAHTEALMRSPYAGSLVLLEVARALPSQELMAAMATAAAAPGRPGGSAKGEAV-LPMMEDPTGHIVMKQLL 174
            ++VP+SRKD A RR ELL  L  PLQ+MC+  T  L R  Y G+ VLLE  R        AA   A A        A  EA    + E P  H+++K+LL
Sbjct:   47 ELVPTSRKDDAQRRAELLEALAAPLQEMCLTETSLLCRDKY-GADVLLEAVRVFSPMPTQAAHNLAGAV-----ADAFAEADDYELYEVPCAHLLLKRLL 140          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835Z7T9_9STRA2.090e-3249.43Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
D7FHP3_ECTSI8.360e-3146.35PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5K7W3_9PHAE2.930e-3046.24PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S1CXQ3_CYCTE3.860e-838.06Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1C698_9STRA7.800e-541.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012959CPL domainPFAMPF08144CPLcoord: 78..174
e-value: 4.1E-7
score: 30.4
NoneNo IPR availablePANTHERPTHR13389:SF0PUMILIO HOMOLOG 3coord: 7..174
IPR040059Pumilio homologue 3PANTHERPTHR13389UNCHARACTERIZEDcoord: 7..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3124602..3126681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19668.1mRNA_S-ischiensis_contig8.19668.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3124601..3126681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19668.1 ID=prot_S-ischiensis_contig8.19668.1|Name=mRNA_S-ischiensis_contig8.19668.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=175bp
PAPALLHVALHHNGCKLLLRLLAPDRAKYLDPEEHKLLEPVMVPSKPTAA
ASTAEGGEGKKADATSSSAEKDGEGDMVPSSRKDLAVRRRELLAYLRQPL
QDMCVAHTEALMRSPYAGSLVLLEVARALPSQELMAAMATAAAAPGRPGG
SAKGEAVLPMMEDPTGHIVMKQLLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012959CPL_dom
IPR040059PUM3