prot_S-ischiensis_contig8.19646.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19646.1
Unique Nameprot_S-ischiensis_contig8.19646.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length112
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 3..73
e-value: 9.5E-11
score: 41.8
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.684
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..111
e-value: 3.4E-16
score: 61.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2833758..2834826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19646.1mRNA_S-ischiensis_contig8.19646.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2833758..2834828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19646.1 ID=prot_S-ischiensis_contig8.19646.1|Name=mRNA_S-ischiensis_contig8.19646.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=112bp
LAVASTLHVLALVLVSQGEMAEAEQELTRSLAIREAHLEGTQHVDLAKTL
RDLAGVVRHSDPPRAEHLYRSALVAFEGSFGKNCLASATTMAALGALLGD
LAAAPRMRARER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf