prot_S-ischiensis_contig8.19641.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19641.1
Unique Nameprot_S-ischiensis_contig8.19641.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length176
Homology
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BLAST of mRNA_S-ischiensis_contig8.19641.1 vs. uniprot
Match: L1K179_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1K179_GUITC)

HSP 1 Score: 65.5 bits (158), Expect = 1.080e-9
Identity = 34/90 (37.78%), Postives = 57/90 (63.33%), Query Frame = 0 
Query:   41 QVVDAAERVLRQDRDARRLLGKDIVCGQPFSQGYSSATVNGRKTTSVSLQLPTRGSLREGTLSVQASTSGEADGEVNLERLVLRAAGGQV 130
            +VV+ AER +R +  A R+LG +I  G P SQ +SS+++NG  T  ++L+LP RG+   GTL V  S +  + G ++L+R +++   G +
Sbjct:  134 RVVEVAERRVRMNAGATRILGSEISVGAPVSQSFSSSSINGVSTKQIALRLPVRGTSSSGTLIVDGSIN--SSGSISLKRCLVQTPTGSL 221
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BLAST of mRNA_S-ischiensis_contig8.19641.1 vs. uniprot
Match: A0A7S0QEA7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QEA7_9CRYP)

HSP 1 Score: 63.2 bits (152), Expect = 9.950e-9
Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 0 
Query:   41 QVVDAAERVLRQDRDARRLLGKDIVCGQPFSQGYSSATVNGRKTTSVSLQLPTRGSLREGTLSVQASTSGEADGEVNLERLVLRAAGGQVLSVPTTGRGTGSGGR 145
            ++ D   R + ++       GKDI    PFSQ YSS+++NG+   S+SL++P RG    G ++V AS  G+    V L R +++  G +++ + T G G G  GR
Sbjct:  160 RIRDLTTRTVSRNSQVIAEFGKDIEIDSPFSQAYSSSSINGKTNKSISLRMPIRGGSTSGIVAVDASIDGQDI--VQLSRCIVQVRG-KIIDIETRGGGGGGDGR 261
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
L1K179_GUITC1.080e-937.78Uncharacterized protein n=3 Tax=Guillardia theta T... [more]
A0A7S0QEA7_9CRYP9.950e-934.29Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2750780..2752124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19641.1mRNA_S-ischiensis_contig8.19641.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2750698..2752993 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19641.1 ID=prot_S-ischiensis_contig8.19641.1|Name=mRNA_S-ischiensis_contig8.19641.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=176bp
MFCSCFVVTVSWTPACLFSPARLFTSLLARKNCFFVPAAGQVVDAAERVL
RQDRDARRLLGKDIVCGQPFSQGYSSATVNGRKTTSVSLQLPTRGSLREG
TLSVQASTSGEADGEVNLERLVLRAAGGQVLSVPTTGRGTGSGGRTRGGR
GGRGGGGAAPDPDDETIIDVEYRDK*
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