prot_S-ischiensis_contig8.19614.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19614.1
Unique Nameprot_S-ischiensis_contig8.19614.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length321
Homology
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: A0A6H5JG98_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG98_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.370e-32
Identity = 85/247 (34.41%), Postives = 136/247 (55.06%), Query Frame = 0
Query:    1 ETLDEVQTRTKIFFMVGGILELVTACLSLAAALAGSSLRKHVI--------RHTRGGGGSAADRVPLSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLS-DGDDTS-WVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIISSMLVLLQALSFAAEAHDGFVHTPSPSKDVAAFWLGFVLLGLLRVGASAAVLAYNVRGVHRRVVAAEIQYRRLVAEHEML 237
            ++L  VQT+     +V G+L +VT  L + AA+A  + R  ++        RH R G         LSR E+  +AWALA+ A + ++  ++ + + WL+ DG+    W+L+ W   GR D RY   D++ V+T +++A +VGP A++ AWAV+ RK +R ++GI++ +  +  Q L +   A          SK  A F    V+L LL+V  + AVL +NV  + +RV AAE+ YR L+ EH  L
Sbjct:  663 DSLYSVQTKVGTMLIVSGVLSVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQG--------KLSRGERLAVAWALALAATSTFIDGSFAVISAWLARDGEQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRYVTSADSSESSAEPGSK--AFFIAASVVLALLQVAGALAVLIFNVGRMTKRVHAAEVHYRALLLEHGRL 899          
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: D8LG14_ECTSI (CRAL/TRIO, N-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG14_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 3.760e-29
Identity = 81/234 (34.62%), Postives = 129/234 (55.13%), Query Frame = 0
Query:    1 ETLDEVQTRTKIFFMVGGILELVTACLSLAAALAGSSLRKHVI--------RHTRGGGGSAADRVPLSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLS-DGDDTS-WVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIISSMLVLLQALSFAAEAHDGFVHTPSPSKDVAAFWLGFVLLGLLRVGASAAVLAYNVRGVHRRVVAAE 224
            E+L  VQT+     +V G+L +VT  L + AA+A  + R  ++        RH R G         LSR E+  +AWALA+ A + ++  ++ +F+ WL+ DG+    W+L+ W   GR D RY   D++ V+T +++A +VGP A++ AWAV+ RK +R ++GI++ +  +  Q L +   A          SK  A F    V+L LL+V  + AVL +NV  + +RV AAE
Sbjct:  802 ESLYSVQTKVGTMLIVSGVLSVVTFALVVCAAVASRAARNALLHLPESSPHRHRRQG--------KLSRGERLAVAWALALAATSTFIDGSFAVFSAWLARDGEQAGVWLLAIWEGMGRGDGRYVDGDTFIVSTAIIVATIVGPGAMLYAWAVYCRKGYRFSVGILVCAASLHTQLLRYVTSADSSESSAEPGSK--AFFIAASVVLALLQVAGALAVLIFNVGRMTKRVHAAE 1025          
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: F0YG95_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG95_AURAN)

HSP 1 Score: 116 bits (291), Expect = 3.250e-25
Identity = 68/187 (36.36%), Postives = 103/187 (55.08%), Query Frame = 0
Query:   55 DRVPLSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLSDGDDTS-----WVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIISSMLVLLQALSFAAEAHDGFVHTPSPSKDVAAFWLGFVLLGLLRVGASAAVLAYNVRGV------HRRVVAAEIQYRRL 230
            ++VPL+  E+  + WAL  G  + ++  T+ +F+  +   +D       W +  W + G+VDARY+ SDS+ V     +AL+ GPA LV AWA F RK +RH LGI+I++  V    L  A EAH GF    +P  D   FW+ F+L  ++R      VLA +++G+      HRR     +QYR+L
Sbjct:  758 EQVPLTDYERGAICWALFTGLVHIFMDGTFAIFSHLVRFTNDRGRLQRPWFVELWHLWGKVDARYRRSDSFIVVQVGAMALVAGPACLVFAWATFERKVYRHALGILIATAQVWTLVLYVATEAHAGFQDC-APRDDFLFFWVLFILTSIIRFLLPLPVLAGSIKGMLRDAEFHRRW---HLQYRKL 940          
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: A0A2U1L1I0_ARTAN (Emopamil-binding n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1L1I0_ARTAN)

HSP 1 Score: 61.2 bits (147), Expect = 2.450e-7
Identity = 43/131 (32.82%), Postives = 64/131 (48.85%), Query Frame = 0
Query:   54 ADRVP-LSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLSDGDDTSWVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIISSMLVLLQALSFAAEAHDGFVHTPSP 183
            A R P +S+ +K ++ W +  G  +  + S Y LF          S++   W    + D+RY   DS  VA EV+  LL GPA L+ A+A+ +RK + H L I +S   +   AL F     DG   + SP
Sbjct:   52 AGRFPKISKVDKVIICWWVFTGLTHLILES-YYLFTPEFYKQKTPSYLAEVWKEYSKGDSRYIGRDSTVVAIEVITILLEGPACLLAAYAIATRKVYSHLLQIAVSLGQLYGTALYFITSYLDGDNFSASP 181          
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: A0A2U1L1N5_ARTAN (Emopamil-binding n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1L1N5_ARTAN)

HSP 1 Score: 58.9 bits (141), Expect = 1.410e-6
Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 0
Query:   59 LSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLSDGDDTSWVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIISSMLVLLQALSFAAEAHDGFVHTPSP 183
            +S+A+K ++ W +  G  + ++   Y +F          +++   W    + D+RY   DS  VA EV+  LL GPA L+ A+A+ +RK + H L I +S   +   AL F     DG   + SP
Sbjct:   52 ISKADKVLMCWWVFTGFTHMFLEG-YFVFTPEFYKQKSPTYLAEVWKEYSKGDSRYIGRDSTVVAIEVITILLEGPACLLAAYAIATRKVYSHLLQIAVSLGQLYGTALYFITSYLDGDNFSASP 175          
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: A0A118K7F0_CYNCS (Emopamil-binding (Fragment) n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118K7F0_CYNCS)

HSP 1 Score: 55.1 bits (131), Expect = 4.190e-5
Identity = 38/131 (29.01%), Postives = 63/131 (48.09%), Query Frame = 0
Query:   54 ADRVP-LSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLSDGDDTSWVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIISSMLVLLQALSFAAEAHDGFVHTPSP 183
            A R P +S+ +K ++ W +  G  +  +   Y +F        + +++   W    + D+RY   DS  VA E + A+L GPA L+ A+A+ +RK++ H L I IS   +    + F     DG     SP
Sbjct:   84 AGRFPKISKLDKTLMCWWVFTGLTHI-ILEGYFVFTPEFFKQKNPTYLAEVWKEYSKGDSRYVGRDSAVVAVEGITAVLEGPACLLAAYAIATRKSYSHLLQIAISLGQLYGTVVYFVTSLLDGDDFAASP 213          
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: A0A2U1L1I9_ARTAN (Emopamil-binding n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1L1I9_ARTAN)

HSP 1 Score: 54.3 bits (129), Expect = 5.350e-5
Identity = 34/125 (27.20%), Postives = 62/125 (49.60%), Query Frame = 0
Query:   59 LSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLSDGDDTSWVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIISSMLVLLQALSFAAEAHDGFVHTPSP 183
            +S+A+K ++ W +  G  + ++   Y +F          +++   W    + D+RY   DS  +A E + A+L GPA ++ A+A+ +RK++ H L I IS   +   A+ F     +G     SP
Sbjct:   52 ISKADKVLMCWWVFTGFTHMFLEG-YFVFTPEFYKQKSPTYLAEVWKEYSKGDSRYVGRDSAVIAVEGITAVLEGPACILAAYAIATRKSYSHLLQIAISIGQLYGTAVYFITSYLEGDNFAASP 175          
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: UPI001CB95D97 (probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB95D97)

HSP 1 Score: 54.3 bits (129), Expect = 5.350e-5
Identity = 33/106 (31.13%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   54 ADRVP-LSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLSDGDDTSWVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIIS 158
            A R P +S+ +K ++ W +  G  +  V   Y +F        D +++   W    + D+RY   DS  VA E + A+L GPA ++ A+A+ +RK++ H L I I+
Sbjct:   46 AGRFPKISKTDKLLMCWWVFTGLTHM-VLEGYFVFTPEFYKQKDPTYLAEVWKEYSKGDSRYAGRDSAIVAVEGITAVLEGPACILAAYAIATRKSYSHLLQIAIA 150          
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Match: A0A1B6Q2I5_SORBI (EXPERA domain-containing protein n=3 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1B6Q2I5_SORBI)

HSP 1 Score: 54.3 bits (129), Expect = 5.410e-5
Identity = 39/137 (28.47%), Postives = 67/137 (48.91%), Query Frame = 0
Query:   59 LSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLSDGDDTSWVLSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFRHTLGIIISSMLVLLQALSFAAEAHDGFVHTPSPSKDVAAFWLGFV 195
            LSR ++ ++ W L        + S ++    +LS  ++ ++    +    + D+R+   +S  +A EVV  +L GPAAL+ A+A+ SRK++ H L   +S   +  + L F     DGF    SP      FW  F+
Sbjct:   56 LSRTDRLLMGWWLFAALTYIVLESPFLFTPDFLSK-ENPNYFDELFKEYSKGDSRFAARNSTVLALEVVTIVLEGPAALLAAYAIASRKSYSHILQFAVSLAQLYGRLLYFITAYLDGFNFWVSPYY----FWAYFI 187          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JG98_9PHAE3.370e-3234.41CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
D8LG14_ECTSI3.760e-2934.62CRAL/TRIO, N-terminus family protein n=1 Tax=Ectoc... [more]
F0YG95_AURAN3.250e-2536.36Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2U1L1I0_ARTAN2.450e-732.82Emopamil-binding n=1 Tax=Artemisia annua TaxID=356... [more]
A0A2U1L1N5_ARTAN1.410e-630.40Emopamil-binding n=1 Tax=Artemisia annua TaxID=356... [more]
A0A118K7F0_CYNCS4.190e-529.01Emopamil-binding (Fragment) n=2 Tax=Cynara cardunc... [more]
A0A2U1L1I9_ARTAN5.350e-527.20Emopamil-binding n=1 Tax=Artemisia annua TaxID=356... [more]
UPI001CB95D975.350e-531.13probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-i... [more]
A0A1B6Q2I5_SORBI5.410e-528.47EXPERA domain-containing protein n=3 Tax=Sorghum b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007905Emopamil-binding proteinPFAMPF05241EBPcoord: 61..198
e-value: 1.6E-12
score: 47.2
IPR007905Emopamil-binding proteinPANTHERPTHR14207STEROL ISOMERASEcoord: 10..199
NoneNo IPR availablePANTHERPTHR14207:SF03-BETA-HYDROXYSTEROID-DELTA(8),DELTA(7)-ISOMERASEcoord: 10..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 212..320
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..189
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 188..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2541076..2543190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19614.1mRNA_S-ischiensis_contig8.19614.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2541076..2543190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19614.1 ID=prot_S-ischiensis_contig8.19614.1|Name=mRNA_S-ischiensis_contig8.19614.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=321bp
ETLDEVQTRTKIFFMVGGILELVTACLSLAAALAGSSLRKHVIRHTRGGG
GSAADRVPLSRAEKWVLAWALAVGAWNCYVTSTYVLFNTWLSDGDDTSWV
LSFWTVAGRVDARYKLSDSYFVATEVVLALLVGPAALVLAWAVFSRKTFR
HTLGIIISSMLVLLQALSFAAEAHDGFVHTPSPSKDVAAFWLGFVLLGLL
RVGASAAVLAYNVRGVHRRVVAAEIQYRRLVAEHEMLKKSAAAAAAAAAA
ATNDTFHLVAEVPHPRGRGGDEEEGRWRAAAAATTTMRRPICRRGGHGGG
ACTPSVAGGGTTPAKESLRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007905EBP