prot_S-ischiensis_contig8.19572.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19572.1
Unique Nameprot_S-ischiensis_contig8.19572.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length576
Homology
BLAST of mRNA_S-ischiensis_contig8.19572.1 vs. uniprot
Match: A0A6H5KVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS6_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 1.350e-41
Identity = 182/631 (28.84%), Postives = 240/631 (38.03%), Query Frame = 0
Query:   11 LSTNDLPYVDGRALVKVFLLEGPFPWNAPDEVTAAAGPMWMSYALAHAGIGFLVEESNEHHVVEYHAQNYLGAFLPVLPPAXXXXXXXXXXXXXXXXXXXXXXXG-----------------------------------------------------------------NGTDPGNDTSPSWIGGVDVPVPLFDVPG----------------GGDGTGXXXXXXXXXXXXV-----------GSDNSTMWWDNTAALHYSTGFDPGRWTSASYVAKITGVLYNDVAGWAPTFLESNGVYKPMSACQGKGDT-----LAAHNSSSSYDFAWAVFARLASNGLDFSEEVVLPPRRTAFCLFADDTDNDAFHTNHVNVAAXXXXXXXXXXXXXXXXXXXXXXXQTRWGSRVREWGRGPGDGHNRHFQAPGPSGQWAEMDVASVGASVVPASAEVESFFRNASACITQKAAAAAAGNGT-----------------GEGAEDVLNGVAACLGDEAFGYLYLNDSAYYRLPLAST---------------------------------GTKAGMVRVAQAMPQRPVSPAKSSDT--VVSWVIGSLVAVAIVAGAAVAYFKVRRSMGSTTGAVGG 492
            + +N +  V+  A+VKVFLLEGPFPWN P  +   AG  W S+AL HA +GFLVEES   HVVE +  +Y+G+FLP +PP  XXXXXXXXXXXX                                                                            NGT    D      GG++    ++D  G                GG G G       XXXXX            G+  + + W+N A +  S+GFD  RW SA+Y+AKITG+LYND+AGW+  + E N  ++P+SAC G  D       A   S+ SYDF WA F RLA NG+ F +EVV+ P+RT  CLF +    DA    H                                            DG+                              E+  ++R+   C+   AAAAA+GN +                 GEG   ++ G+  CL  +   +LY N SAY RLPL  T                                 G  A +VR + A+P RP  P    D   +V   +G       VAG    Y   RR   +  G+ GG
Sbjct:    1 MDSNKIDVVENGAIVKVFLLEGPFPWNTPTAILDGAGNFWESFALTHAALGFLVEESETRHVVELYGSDYIGSFLPDVPPPPXXXXXXXXXXXXHVTPAPALTHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQATASPASXXXXXXXXXXXXXXNGTAAPADGG----GGLEEGWAVYDKGGYAEEARRGGGXXXXXXGGGGVGWVEHIGEXXXXXXXXXXRRGLENGGNGTTPVAWNNDAVVRVSSGFDEKRWISANYIAKITGLLYNDIAGWSSIYREKNPSFQPLSACGGSSDRGGDGDFAHRGSADSYDFVWAAFDRLAKNGVIFDQEVVIKPKRTVMCLFPEG-GVDAAELVHA-------------------------------------------DGNE-----------------------------EIAEYYRDTGDCVRSLAAAAASGNSSYLGPACPSNGGGGDGWAGEGGVSLMLGLGDCLAGQENAFLYHNSSAYLRLPLNVTSVAEXXXXXXXXXXXXXXXXXXMRKEHGSGHVGGMTARLVRYSPALPPRPEQPPGGPDRAYIVYLAVGLAALGLAVAGLRALYRWRRREKLAAYGSEGG 554          
BLAST of mRNA_S-ischiensis_contig8.19572.1 vs. uniprot
Match: D8LSH7_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH7_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 3.790e-33
Identity = 144/534 (26.97%), Postives = 198/534 (37.08%), Query Frame = 0
Query:   11 LSTNDLPYVDGRALVKVFLLEGPFPWNAPDEVTAAAGPMWMSYALAHAGIGFLVEESNEHHVVEYHAQNYLGAFLPVLPPAXXXXXXXXXXXXXXXXXXXXXXXGNGTDPGNDTSPSWIGGVDVPVPLFDVP-----GGGDGTGXXXXXXXXXXXXVGSDNSTMWWDNTAALHYSTGFDPGRWTSASYVAKITGVLYNDVAGWAPTFLESNGVYKPMSACQGKGDT-----LAAHNSSSSYDFAWAVFARLASNGLDFSEEVVLPPRRTAFCLFADDTDNDAFHTNHVNVAAXXXXXXXXXXXXXXXXXXXXXXXQTRWGSRVREWGRGPGDGHNRHFQAPGPSGQWAEMDVASVGASVVPASAEVESFFRNASACITQKAAAAAAGNG-TGEGAEDVLNGVAACLGDEAFGYLYLNDSAYYRLPLAST----------------------------------GTKAGMVRVAQAMPQRPVSPAKSSDTV-VSWVIGSLVAVAIVAGAAVAYFKVRR-----SMGSTTGAVGGG 493
            + +N +  V+  A+VKVFLLEGPFPWN P  +   AG  W S+AL HA +GFLVEES                                                            W+ G+               G GDG               G+  + + W+N A +  S+GFD  RW SA+Y+AKITG+LYND+ GW+ T+ E    ++P+SAC G  D       A   S+ SYDF WA F RL        EEVV+ P+RT  CLF +    DA    H +                                 + E+ R                      D      S+  A+A   S + +  AC +        G+G  GEG   ++ G+  CL  +   +LY N SAY RLPL  T                                  G  A +VR + A+P RP  P    D   + ++   L AV +      A ++ RR     + GS  G+V GG
Sbjct:    1 MDSNQIDVVENGAIVKVFLLEGPFPWNTPTAILDGAGNFWESFALTHAALGFLVEESETR---------------------------------------------------------WVEGIGEEXXXXXXXXXXRRGLGDG---------------GNGTTPVTWNNDAVVRVSSGFDEKRWISANYIAKITGLLYNDITGWSSTYREKKPSFQPLSACGGSNDRGGDGDFAHRGSADSYDFVWAAFDRLG-------EEVVIKPKRTVMCLFPEG-GVDAAELVHADG-----------------------------NEEIAEYYR----------------------DTGECVRSLAAAAASGNSSY-SGPACPSN----GGGGDGWAGEGGVSLMLGLGDCLAGQENAFLYHNSSAYLRLPLNVTSVAEEAEXXXXXXXXXXXXXXXXXXXQHGSGHVGGMTARLVRYSPALPPRPEQPPGGPDRAYIVYLAVGLAAVGLAVAGLRALYRWRRREKLAAYGSEGGSVHGG 398          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVS6_9PHAE1.350e-4128.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSH7_ECTSI3.790e-3326.97Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026138Ceroid-lipofuscinosis neuronal protein 5PANTHERPTHR15380CEROID-LIPOFUSCINOSIS, NEURONAL 5coord: 166..431
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 478..576
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..454
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 455..477
NoneNo IPR availableTMHMMTMhelixcoord: 455..477

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2267328..2275831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19572.1mRNA_S-ischiensis_contig8.19572.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2267328..2275941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19572.1 ID=prot_S-ischiensis_contig8.19572.1|Name=mRNA_S-ischiensis_contig8.19572.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=576bp
MQEPRVEPLPLSTNDLPYVDGRALVKVFLLEGPFPWNAPDEVTAAAGPMW
MSYALAHAGIGFLVEESNEHHVVEYHAQNYLGAFLPVLPPAPAPAPPTPA
PTPSPGPDPTPAPTGNGTDPGNDTSPSWIGGVDVPVPLFDVPGGGDGTGA
GEDGGSGDRGGVGSDNSTMWWDNTAALHYSTGFDPGRWTSASYVAKITGV
LYNDVAGWAPTFLESNGVYKPMSACQGKGDTLAAHNSSSSYDFAWAVFAR
LASNGLDFSEEVVLPPRRTAFCLFADDTDNDAFHTNHVNVAAAAVAEEEE
DQDQDQDQDQDQDQGQTRWGSRVREWGRGPGDGHNRHFQAPGPSGQWAEM
DVASVGASVVPASAEVESFFRNASACITQKAAAAAAGNGTGEGAEDVLNG
VAACLGDEAFGYLYLNDSAYYRLPLASTGTKAGMVRVAQAMPQRPVSPAK
SSDTVVSWVIGSLVAVAIVAGAAVAYFKVRRSMGSTTGAVGGGWPSDGST
IGMGSMSMGMSRPSPPRRRGRRGSDSVELGQPLLSSSILAMEGGAADVLG
FGAPMPPGAFPHGGEELELLGRSEGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026138CLN5