prot_S-ischiensis_contig8.19562.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19562.1
Unique Nameprot_S-ischiensis_contig8.19562.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length236
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..139
NoneNo IPR availableGENE3D1.10.238.10coord: 112..202
e-value: 2.8E-6
score: 28.8
NoneNo IPR availableGENE3D1.10.238.10coord: 6..104
e-value: 1.8E-14
score: 56.0
NoneNo IPR availablePANTHERPTHR20875FAMILY NOT NAMEDcoord: 14..192
IPR002048EF-hand domainSMARTSM00054efh_1coord: 66..94
e-value: 12.0
score: 9.2
coord: 146..174
e-value: 3.4
score: 13.5
coord: 30..58
e-value: 5.8
score: 11.6
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 34..88
e-value: 1.3E-9
score: 38.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 26..61
score: 10.664
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 142..177
score: 7.456
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 70..97
score: 8.432
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 31..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2209984..2212471 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19562.1mRNA_S-ischiensis_contig8.19562.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2209984..2212473 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19562.1 ID=prot_S-ischiensis_contig8.19562.1|Name=mRNA_S-ischiensis_contig8.19562.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=236bp
VKQPRPERVLRRIQREVARLARHGRMGKHPLLGLFDAMDRDGSGSLTRQQ
LHRGLEELGFHIRPGEARPVLDRFDRRGDGRITYENFARTLEEQTQEQAD
YSGGDDSHGGFGGQGQEDEEEEEEEEEDLRGRLREVVERAVTRGVDYRRV
FEEADGDFSGTVDAAGLREAMRALRSPLSDADLRQLQQRFPATASDGGGG
GSREGSRGRGSRSRSPGAGGGVRYLEMIHWALPHRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair