prot_S-ischiensis_contig8.19536.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19536.1
Unique Nameprot_S-ischiensis_contig8.19536.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length172
Homology
BLAST of mRNA_S-ischiensis_contig8.19536.1 vs. uniprot
Match: K3WJQ3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJQ3_GLOUD)

HSP 1 Score: 58.5 bits (140), Expect = 6.380e-7
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    2 CGCVLGTAPVNPLDGGTRKHSFRCFHCRWTSEHVGLVEDDPASLAMAALVREREDPSQPVFAKLVAGVKQREASARSKRAGMFPAS 87
            CG VL TA  + L    +++ F C HCRW S  +GL+E+DP +L M+A+ RERE   + +F  L++      A+  S     FP +
Sbjct:   79 CGSVLSTAFHDAL----QRYFFVCSHCRWDSIGLGLLEEDPDTLVMSAVARERESAQEDIFHTLLSHYSTVTATRSSCSNSSFPTA 160          
BLAST of mRNA_S-ischiensis_contig8.19536.1 vs. uniprot
Match: A0A5D6YBU6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBU6_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 6.390e-7
Identity = 36/84 (42.86%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    2 CGCVLGTAPVNPLDGGTRKHSFRCFHCRWTSEHVGLVEDDPASLAMAALVREREDPSQPVFAKLVAGVKQREASA---RSKRAG 82
            CG  L TA    L    RK+ F C HCRW S  +GLV+DDP +L M+A+ RERE   +  F  L++      A+A   RS R G
Sbjct:   87 CGNALSTAFHETL----RKYFFVCAHCRWDSLALGLVDDDPDTLVMSAVARERESAQEDAFHALLSFHSAAAAAATPARSSRTG 166          
BLAST of mRNA_S-ischiensis_contig8.19536.1 vs. uniprot
Match: A0A2D4BH68_PYTIN (Dynactin light chain p62 subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH68_PYTIN)

HSP 1 Score: 52.8 bits (125), Expect = 6.150e-5
Identity = 28/61 (45.90%), Postives = 32/61 (52.46%), Query Frame = 0
Query:    2 CGCVLGTAPVNPLDGGTRKHSFRCFHCRWTSEHVGLVEDDPASLAMAALVREREDPSQPVF 62
            CG VL T          RK  F C H  W S  +GLVEDDP +L M A+ RERE   + VF
Sbjct:   78 CGSVLSTV----FHESQRKFFFACPHXHWDSLALGLVEDDPDTLLMTAVARERESHHEDVF 134          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
K3WJQ3_GLOUD6.380e-737.21Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6YBU6_9STRA6.390e-742.86Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4BH68_PYTIN6.150e-545.90Dynactin light chain p62 subunit n=1 Tax=Pythium i... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2024425..2026030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19536.1mRNA_S-ischiensis_contig8.19536.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2024425..2026032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19536.1 ID=prot_S-ischiensis_contig8.19536.1|Name=mRNA_S-ischiensis_contig8.19536.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=172bp
SCGCVLGTAPVNPLDGGTRKHSFRCFHCRWTSEHVGLVEDDPASLAMAAL
VREREDPSQPVFAKLVAGVKQREASARSKRAGMFPASRGGSTPPVPHGGP
WKVADIEERLAKHAREAATASQGIPRPDGSSGPPPIIPPCEGGPDPELWA
VGAAQMVRGVNERVMQPSPAGR
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