prot_S-ischiensis_contig8.19496.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19496.1
Unique Nameprot_S-ischiensis_contig8.19496.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length120
Homology
BLAST of mRNA_S-ischiensis_contig8.19496.1 vs. uniprot
Match: A0A6H5KAN0_9PHAE (PRP3 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN0_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 9.280e-42
Identity = 74/109 (67.89%), Postives = 93/109 (85.32%), Query Frame = 0
Query:   12 KKAKDFTLRLDAQGRQVDAEGKLVRLAPVMTLKANKLSSAAHNPYLQHTKVDEEDGAQQVDPRVRAGGRDRTRAKKAFSFVEEGTYVKIGESLRHREHRKLLSGMISGR 120
            KKA+D TLRLDA+GRQVDA+GK+V++ PV+T+KAN+L S AHNPYLQH  V++ D AQ VDPRV+ G RD+ RAK+AF+FVEEGTY+K G++LR REHRK LSG +SGR
Sbjct:  211 KKAQDHTLRLDAKGRQVDADGKVVKMGPVLTIKANRLGSKAHNPYLQHRTVEDTDAAQAVDPRVQTGNRDK-RAKRAFNFVEEGTYIKQGDNLRFREHRKFLSGRMSGR 318          
BLAST of mRNA_S-ischiensis_contig8.19496.1 vs. uniprot
Match: A0A836CLY2_9STRA (Pre-mRNA processing factor 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLY2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 5.640e-10
Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   12 KKAKDFTLRLDAQGRQVDAEGKLVR--LAPVMTLKAN-KLSSAAHNPYLQHTKVDEEDGA-QQVDPRVRAGGRDRTRAKKA-FSFVEEGTYVKIGESLRHRE----HRKLLSG 115
            KKA+DFTLRLD QGRQ+D  GK+++    PV+TLKAN      A+NPYL H       GA +++D R++A      R K++ FSFV+EGT+               HR+LL G
Sbjct:   85 KKARDFTLRLDEQGRQIDETGKVIQSEFKPVVTLKANVDAQRRANNPYLAHKL-----GADKEIDARLQAKV---ARPKRSTFSFVKEGTFXXXXXXXXXXXXXXXHRQLLRG 189          
BLAST of mRNA_S-ischiensis_contig8.19496.1 vs. uniprot
Match: A0A8J2SIG5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIG5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 5.180e-7
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 0
Query:   16 DFTLRLDAQGRQVDAEGKLV----RLAPVMTLKANKLSSAAH--NPYLQHTKVDEEDGAQQVDPRV----RAGGRDRTRAKKAFSFVEEGTYVKIGESLRHREHRKLL 113
            D  LRLD +G+ VDA G++V    R+A ++  +  +  +     NPY ++  V + DG    D RV    RA  +DR     AF+FV+EG YVK+GE+ R RE +K L
Sbjct:  115 DLALRLDEKGQHVDASGRVVDDERRVASLLVHERQEDQNKPKKVNPYTKY--VPDHDGCDVNDDRVVTKKRASKKDR-----AFAFVQEGHYVKLGEATRAREQQKHL 215          
BLAST of mRNA_S-ischiensis_contig8.19496.1 vs. uniprot
Match: A0A6S8E5X6_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8E5X6_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.540e-6
Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 0
Query:   19 LRLDAQGRQVDAEGKLVRLAPVMTLKAN-----------KLSSAAHNPYLQHTKVDEEDGAQQ----------VDPRVRA-----GGRD---RTRAKKAFSFVEEGTYVKIGESLRHREHRK 111
            LRL+ +G+ VDA+G ++ L PV TL+ N              + + NPYLQ   +DEE+   +          VD  V A     GG D   R + K+ F FVE+G Y +I + +R +E +K
Sbjct:   78 LRLNEKGQAVDAQGNVIELKPVSTLRMNAKDKDGKQDQASTRTKSVNPYLQ--LMDEEENKLELEKKSNREGDVDIEVSAEPDEVGGPDLAGRKKKKRMFKFVEQGKYTRIADHIREKEAKK 197          
BLAST of mRNA_S-ischiensis_contig8.19496.1 vs. uniprot
Match: L8H264_ACACA (PremRNA processing factor 3 (PRP3) protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H264_ACACA)

HSP 1 Score: 52.4 bits (124), Expect = 2.160e-5
Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 0
Query:   19 LRLDAQGRQVDAEGKLV---RLAPVMTLKANKLSSAAHNPYLQHTKVDEEDGAQQV-DPRVRAGGRDRTRAKKAFSFVEEGTYVKIGESLRHREHRKLLSGMI 117
            LRLDA+GR++D +G+++   R   V TL  NK         L+   V+ +       DPR+RA     TR ++AF+FVE GTYV+  + +R +  ++LL   +
Sbjct:   95 LRLDAEGREIDDQGRVISSGRAPVVATLAINKRVQREELFKLESPVVETDPSKNPYFDPRMRAPK--VTRPRRAFNFVEAGTYVRKAQRMRTKLAKELLESSM 195          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KAN0_9PHAE9.280e-4267.89PRP3 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A836CLY2_9STRA5.640e-1043.36Pre-mRNA processing factor 3-domain-containing pro... [more]
A0A8J2SIG5_9STRA5.180e-738.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6S8E5X6_9STRA8.540e-633.61Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
L8H264_ACACA2.160e-534.95PremRNA processing factor 3 (PRP3) protein n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1797933..1801285 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19496.1mRNA_S-ischiensis_contig8.19496.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1797933..1801285 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19496.1 ID=prot_S-ischiensis_contig8.19496.1|Name=mRNA_S-ischiensis_contig8.19496.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=120bp
GVAEGGLDNKDKKAKDFTLRLDAQGRQVDAEGKLVRLAPVMTLKANKLSS
AAHNPYLQHTKVDEEDGAQQVDPRVRAGGRDRTRAKKAFSFVEEGTYVKI
GESLRHREHRKLLSGMISGR
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