prot_S-ischiensis_contig8.19470.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19470.1
Unique Nameprot_S-ischiensis_contig8.19470.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length99
Homology
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: A0A6H5K5W5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W5_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.720e-15
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMETTPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGKITRLSLT 72
            M+HR+ +EAL  T+ DL  T  D  FGGK +LFSGDWRQ GP++K G A + V A+ +SS LW  + R+ LT
Sbjct:   41 MTHRYCIEALDRTMKDL--TKIDKLFGGKTILFSGDWRQTGPIVKNGSATDTVDAAFISSVLWTNVHRMKLT 110          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: A0A6H5L0V2_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V2_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.670e-15
Identity = 39/72 (54.17%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMETTPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGKITRLSLT 72
            M+HR+ VEAL  TL DLM    D  FGGK +LFSGDWRQ GP++K G   + V A+++SS  W  I+RL LT
Sbjct:   36 MTHRYCVEALDRTLKDLMRN--DRLFGGKTILFSGDWRQTGPIVKHGSPTDTVDAAVISSHRWKHISRLRLT 105          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: A0A6H5J9C5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C5_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 3.190e-14
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMETTPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGKITRLSL 71
            M+HR+ VEAL  TL DLM    D PFGGK +LFSGDWRQ GP++K     + V A+ +SS LW  + R  L
Sbjct:   90 MTHRYCVEALDRTLKDLMAV--DQPFGGKTILFSGDWRQTGPIVKNAAPTDTVDAAFISSPLWKGVMRFRL 158          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: UPI0010358BC7 (uncharacterized protein LOC114308811 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010358BC7)

HSP 1 Score: 68.6 bits (166), Expect = 3.520e-12
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMETTPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGKITRLSL 71
            M++R+A EAL+ TL+D+  T  D PFGGKI++F GD+RQ  PV+  G   E + AS+V S+LW  I +L L
Sbjct:    1 MTNRYAFEALNRTLIDI--TGVDYPFGGKIMVFGGDFRQVLPVVPKGTKAETIVASIVKSSLWSHIQKLRL 69          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: UPI000B8F6AD4 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F6AD4)

HSP 1 Score: 70.5 bits (171), Expect = 4.330e-12
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMET----TPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGK--ITRLSLTICVIVAIPYTRLRECR 88
            M H+ A EAL  T+ D+         D+PFGGK+++F GD+RQ  PVI  G   E+VSASL SS +W K  + RL+  IC+ +    + +   R
Sbjct:    1 MVHKHAFEALDRTMTDVFSEGRSIRSDIPFGGKVIVFGGDFRQILPVIPNGTRQEIVSASLSSSYIWSKCRLLRLTKNICLTIGAESSNMESIR 94          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: UPI0019D65529 (uncharacterized protein LOC120698589 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D65529)

HSP 1 Score: 70.1 bits (170), Expect = 6.020e-12
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMETTPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGKITRLSL 71
            M+ R AVEAL N+L D+M+  P++PFGGK V+F GD+RQ  PV++ G   +++ ASL  S LWG +  L L
Sbjct:  334 MTKRQAVEALDNSLCDIMDQ-PEMPFGGKTVVFGGDFRQVLPVVRKGSRAQIIDASLRRSYLWGSMRHLKL 403          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: UPI001CB8E3B7 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8E3B7)

HSP 1 Score: 70.1 bits (170), Expect = 6.470e-12
Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMETTP----DVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWG--KITRLSLTICVIVAIPYTRLRECR 88
            M HR   EAL  TL D+M TT     D PFGGK+++F GD+ Q  PVI+ G   EVV+ASL SS LW   KI RL++ + +    P   L E +
Sbjct:  320 MMHRHCFEALDRTLCDIMSTTSSSCADKPFGGKVIVFGGDFCQVLPVIQKGTRQEVVNASLNSSYLWEHCKILRLTVNMRLQFGCPQQTLHEVK 413          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: A0A3L6DW12_MAIZE (ATP-dependent DNA helicase (Fragment) n=3 Tax=Zea mays TaxID=4577 RepID=A0A3L6DW12_MAIZE)

HSP 1 Score: 70.1 bits (170), Expect = 6.620e-12
Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMET----TPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGKITRLSLT 72
            M+HR+A EAL  +  D++ T    T D+PFGGK+++  GD+RQ  PVI+ G   E+V+A++++SALW  +  L LT
Sbjct:  596 MTHRFAFEALDRSFRDILATSSPATRDLPFGGKVIVLGGDFRQTLPVIEGGSRSEIVNAAIINSALWSHVHILHLT 671          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: UPI000B78C31F (uncharacterized protein LOC110667308 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B78C31F)

HSP 1 Score: 69.7 bits (169), Expect = 6.970e-12
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    1 MSHRWAVEALHNTLVDLMETTPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGKITRLSLTI 73
            M+ R+A+E +H T  ++M+ +   PFGGK+++F GD+RQ  PV+  G   E+VSASLV S LW K+  L LT+
Sbjct:    1 MAKRFAIETVHRTFTNIMDNSK--PFGGKVIVFGGDFRQVLPVVPRGTRQEIVSASLVKSYLWRKMELLRLTM 71          
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Match: A0A0C4FAH5_PUCT1 (ATP-dependent DNA helicase n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4FAH5_PUCT1)

HSP 1 Score: 69.3 bits (168), Expect = 1.250e-11
Identity = 32/70 (45.71%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    3 HRWAVEALHNTLVDLMETTPDVPFGGKIVLFSGDWRQRGPVIKFGEAPEVVSASLVSSALWGKITRLSLT 72
            HR+++EA++ TL+ L E+  D+ FGGK+V+FSGD+RQ  PV+K+ + P    A+L SSA+W  +++  LT
Sbjct:  957 HRYSIEAVNRTLMRLCES--DLAFGGKVVIFSGDFRQILPVVKYNQYPPAYCATLKSSAIWQTVSKFELT 1024          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5W5_9PHAE1.720e-1551.39ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5L0V2_9PHAE3.670e-1554.17ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5J9C5_9PHAE3.190e-1452.11ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI0010358BC73.520e-1249.30uncharacterized protein LOC114308811 n=1 Tax=Camel... [more]
UPI000B8F6AD44.330e-1240.43ATP-dependent DNA helicase PIF1-like n=1 Tax=Helia... [more]
UPI0019D655296.020e-1249.30uncharacterized protein LOC120698589 n=1 Tax=Panic... [more]
UPI001CB8E3B76.470e-1245.74ATP-dependent DNA helicase PIF1-like n=1 Tax=Erige... [more]
A0A3L6DW12_MAIZE6.620e-1244.74ATP-dependent DNA helicase (Fragment) n=3 Tax=Zea ... [more]
UPI000B78C31F6.970e-1246.58uncharacterized protein LOC110667308 n=1 Tax=Hevea... [more]
A0A0C4FAH5_PUCT11.250e-1145.71ATP-dependent DNA helicase n=1 Tax=Puccinia tritic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 1..73
e-value: 1.4E-15
score: 57.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1655536..1655832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19470.1mRNA_S-ischiensis_contig8.19470.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1655247..1655832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19470.1 ID=prot_S-ischiensis_contig8.19470.1|Name=mRNA_S-ischiensis_contig8.19470.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=99bp
MSHRWAVEALHNTLVDLMETTPDVPFGGKIVLFSGDWRQRGPVIKFGEAP
EVVSASLVSSALWGKITRLSLTICVIVAIPYTRLRECRTRGQNSTRAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like