prot_S-ischiensis_contig8.19431.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19431.1
Unique Nameprot_S-ischiensis_contig8.19431.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length332
Homology
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BLAST of mRNA_S-ischiensis_contig8.19431.1 vs. uniprot
Match: A0A6H5KKU1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKU1_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 4.250e-5
Identity = 24/42 (57.14%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:  198 RTRQMGLQFAMDTVRYAPDSEVLSFMLHLVQGLRYAANAATS 239
            RT++MG++FA+DT++Y+ D EV  FMLHLVQGLR+ A ++T+
Sbjct:  716 RTQEMGVRFALDTLKYSEDEEVAVFMLHLVQGLRHEAQSSTN 757
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKU1_9PHAE4.250e-557.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1404634..1409089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19431.1mRNA_S-ischiensis_contig8.19431.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1404632..1409089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19431.1 ID=prot_S-ischiensis_contig8.19431.1|Name=mRNA_S-ischiensis_contig8.19431.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=332bp
GAGAKGNKQEQGGTSGSRVGEVAALKRELETVRQTLEGKLREADAERARL
LTKLATVKADSSRKLEGLESSLAATRAELLRRDEQLANSVKHAREETARA
DAAMLDLRLCQDAVRAQASLAMAASSSSADGHTLLAGSPALRTPPPPSWT
PEKKTLSNNDVSGPGAAGPGPGTEALSRSRSGSVNPAAATAAAALAARTR
QMGLQFAMDTVRYAPDSEVLSFMLHLVQGLRYAANAATSTSLHHPALSTG
SGHGGSSSGSTHGGSASGSTHGGSGHPVASPKRGLPRILFGPDRSPARAA
GAGAGAAPVPDTSAYPTEESAVSPPQRASSFP
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