prot_S-ischiensis_contig8.19422.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19422.1
Unique Nameprot_S-ischiensis_contig8.19422.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length145
Homology
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: D8LLJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLJ6_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 4.830e-45
Identity = 76/130 (58.46%), Postives = 93/130 (71.54%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGD-ESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPWELERQRRQG 141
            M FYQQI TL+PRTNP DLT IFR  A  I++ GGVVR+V NHGVR LPYRF SKH + + + R+  SGRW S Y+DASPA  +   + L AE++V+RVS  RP  KMD I STH RSNPW++E + R G
Sbjct:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPATKMDRIASTHERSNPWDMEWRNRNG 130          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: A0A835Z0N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.180e-30
Identity = 58/124 (46.77%), Postives = 84/124 (67.74%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVV-GDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPWELE 135
            MPFYQ + T K RT P  LTR++R + + +++ GG+VR V+NHGV+ L YRFR++  + G E+RY   GRWVS YFDA P TL+     L+ ++  LR + ++P VKM+ I ST  ++NPWE +
Sbjct:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWI-STRHKTNPWERD 123          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: A0A7S2V599_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V599_9STRA)

HSP 1 Score: 115 bits (287), Expect = 4.650e-30
Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPWE 133
            MP Y Q  T+KP     DL +  +A    I K GGVVR V+NHG+R LPYRFRS+H    E RY   GR++ST+FDASP TL+    +L  +E +LR +NL+PK  M++ R++  + N WE
Sbjct:    1 MPLYHQFLTMKPEAASKDLLKTLKACIQVIQKNGGVVRQVENHGIRTLPYRFRSRHASPGEGRYFYFGRFISTFFDASPTTLKELDDILGLDENMLRRTNLKPKSLMEAARAS--KHNLWE 119          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: A0A7S1YM88_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM88_9STRA)

HSP 1 Score: 100 bits (250), Expect = 9.320e-24
Identity = 47/120 (39.17%), Postives = 79/120 (65.83%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPW 132
            M FY+ + T K       LT + + ++  +V+ GG+VR+VQNHG+R L +RFR++H   D +R  Q GR++S Y+D+SPA  E   ++L  +E VLR ++LR + K+D+I + +++ NP+
Sbjct:    1 MVFYECVITAKNTAPFYQLTSLMKEISLKVVENGGIVRSVQNHGIRDLAHRFRARHPDRDGTRLFQKGRFISVYYDSSPAIQEEVGEILVMDENVLRATHLRARNKLDTINNPYQKKNPY 120          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: A0A6S8YXD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YXD6_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.810e-22
Identity = 42/120 (35.00%), Postives = 79/120 (65.83%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPW 132
            M FY+ + T K   + A LT   ++++  +V+ GG+VR VQNHG+R LP+RF++++   + +RY + GR++S ++DASP TL      +R ++++LR ++L+ + K+  I + + + NP+
Sbjct:    1 MVFYECVLTAKNTASFASLTNTVKSISSIVVESGGIVRTVQNHGIRNLPHRFKARYPDKEGNRYYKEGRFISVWYDASPRTLNQVENEIRLDDQILRYTHLKARNKLWYINNPNEKKNPY 120          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: A0A6T7JZ88_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T7JZ88_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.010e-22
Identity = 45/120 (37.50%), Postives = 77/120 (64.17%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPW 132
            M FY+ + T K      +LT + + V+  +V+RGG+VR+VQNHG+R LP+RF++K+   + +RY + GR++S ++DASP   E    +L  +E VLR ++L+P+ K+      + + NP+
Sbjct:    1 MVFYECVLTAKNTAPFMNLTNLMKTVSLKVVERGGIVRSVQNHGIRDLPHRFKAKYPDKEGNRYYKKGRFISVFYDASPHAREEVQAILDLDEEVLRNTHLKPRNKVTYANIVNEKKNPY 120          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: A0A7S2MAY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAY0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.850e-22
Identity = 44/123 (35.77%), Postives = 76/123 (61.79%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPWELE 135
            M FY+ + T K   +  +LT + + ++  IV  GG+VR++QNHGVR LP+RFR+K+   + +RY + GR+VS ++DASP  +     +L  +E++LR ++L+ + K   + +     NP+  E
Sbjct:    1 MVFYECLMTAKNTAHYNNLTALMKDISLKIVNNGGIVRSIQNHGVRQLPHRFRAKYADREGNRYYEKGRFVSVFYDASPGIMRQVEGILNLDEQILRNTHLKGRNKFMDVNNVREAKNPYIQE 123          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: A0A7S2IGM9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGM9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.680e-21
Identity = 41/120 (34.17%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPW 132
            M FY+ + T K       LT++ + ++  +V+ GG+VR VQNHG+R LP+RF++K+   + +RY + GR++S ++DASP  L      +R ++++LR ++L+ + K+  I     + NP+
Sbjct:    1 MVFYECVLTAKNTAPFTSLTKLMKTISSTVVENGGIVRTVQNHGIRNLPHRFKAKYPDKEGNRYYKKGRFISVWYDASPRVLAKVENEIRLDDQILRHTHLKARNKLWYINIASEKKNPY 120          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: K0TLA5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLA5_THAOC)

HSP 1 Score: 92.4 bits (228), Expect = 7.460e-21
Identity = 42/120 (35.00%), Postives = 74/120 (61.67%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEERVLRVSNLRPKVKMDSIRSTHRRSNPW 132
            M FY+ + T K  T+   LT + + V+  IV+ GG+VR++QNHG+R LP+RF+SK+   + +RY + GR++S ++D++P T +    +L   E +LR ++LR   + + +       NP+
Sbjct:   39 MVFYECLMTAKNTTHYNLLTSLMKEVSHKIVENGGIVRSIQNHGIRQLPHRFKSKYADREGNRYYEKGRFISVFYDSNPVTAKQVETILNLNEEILRNTHLRASNRFNEVNDLLESRNPY 158          
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Match: A0A7S2S5L1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5L1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.360e-20
Identity = 48/132 (36.36%), Postives = 81/132 (61.36%), Query Frame = 0
Query:   13 MPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVRAVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQVLRAEER--VLRVSNLRPKVKMDSIRSTHRRSNPW-----ELERQ 137
            M FY+ + T +   + A LTR+ + V+  +V  GG+VR+VQNHG+R LPYRF++K+  G+ +RY + GR+ S ++DASP T +    +L+ +E   +LR ++L  +  +  I   +   NP+     E+E+Q
Sbjct:    1 MVFYECVITTRNTASFAILTRLVKNVSHKVVSNGGIVRSVQNHGIRDLPYRFKAKYPDGEGNRYYKKGRFFSIFYDASPKTQKEVESILKLDEDNIMLRGTHLNTRNPLLDINIANANKNPYLKQVIEMEQQ 132          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LLJ6_ECTSI4.830e-4558.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0N7_9STRA1.180e-3046.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V599_9STRA4.650e-3047.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1YM88_9STRA9.320e-2439.17Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6S8YXD6_9STRA1.810e-2235.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6T7JZ88_9STRA2.010e-2237.50Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A7S2MAY0_9STRA6.850e-2235.77Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2IGM9_9STRA3.680e-2134.17Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K0TLA5_THAOC7.460e-2135.00Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2S5L1_9STRA3.360e-2036.36Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 13..139
e-value: 2.9E-21
score: 77.4
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 16..112
e-value: 3.5E-15
score: 56.1
IPR000529Ribosomal protein S6PANTHERPTHR21011MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6coord: 13..136
NoneNo IPR availablePANTHERPTHR21011:SF128S RIBOSOMAL PROTEIN S6, MITOCHONDRIALcoord: 13..136
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 12..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1347733..1349548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19422.1mRNA_S-ischiensis_contig8.19422.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1347733..1349548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19422.1 ID=prot_S-ischiensis_contig8.19422.1|Name=mRNA_S-ischiensis_contig8.19422.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=145bp
APRSASDTAVLGMPFYQQIATLKPRTNPADLTRIFRAVADAIVKRGGVVR
AVQNHGVRPLPYRFRSKHVVGDESRYQQSGRWVSTYFDASPATLEAAAQV
LRAEERVLRVSNLRPKVKMDSIRSTHRRSNPWELERQRRQGAGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR000529Ribosomal_S6
IPR035980Ribosomal_S6_sf