prot_S-ischiensis_contig8.19404.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19404.1
Unique Nameprot_S-ischiensis_contig8.19404.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length229
Homology
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BLAST of mRNA_S-ischiensis_contig8.19404.1 vs. uniprot
Match: D8LND9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND9_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 8.540e-29
Identity = 70/164 (42.68%), Postives = 91/164 (55.49%), Query Frame = 0 
Query:   48 QRTQAPAKLRDWRQEAYGPMMTKAVAEDDPEMLRWLWRHELVTVDAPDALGNTAAHLAVFHDSPRVL--RELHALGLDLSLPCDAQGLGSAAFHCSLLGRVDCLMALMEXXXXXXXXXXRYGRTPETVAARHDQGACADLVRTALAAPTLQRVGRGCLARRRAR 209
            +R+ APA  + W+Q+ YG MM +AV +DD E L W+ +H LV + A D LGNTAAHL VFHD PR++   EL  LG D+S PCD                                   R+GRTPETVA RHDQG    L+R +LA   +QR+ RG L R++A+
Sbjct:   64 ERSPAPAIFKAWQQDKYGTMMMQAVLQDDAESLTWMLKHNLVDLAATDDLGNTAAHLGVFHDFPRLVDGTELIDLGYDMSPPCD-----------------------------------RFGRTPETVAERHDQGGVRSLIRRSLALLDVQRLTRGFLGRQKAK 192
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LND9_ECTSI8.540e-2942.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 48..216
e-value: 2.7E-15
score: 58.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 68..185
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 97..179
score: 8.747
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 191..216
score: 7.309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1212660..1217479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19404.1mRNA_S-ischiensis_contig8.19404.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1212642..1217479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19404.1 ID=prot_S-ischiensis_contig8.19404.1|Name=mRNA_S-ischiensis_contig8.19404.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=229bp
MEAASPQGEQWHNVGGDEQEAAVVEEDGEESDTAVDPAPASASFLNVQRT
QAPAKLRDWRQEAYGPMMTKAVAEDDPEMLRWLWRHELVTVDAPDALGNT
AAHLAVFHDSPRVLRELHALGLDLSLPCDAQGLGSAAFHCSLLGRVDCLM
ALMELGYDVSAPCDRYGRTPETVAARHDQGACADLVRTALAAPTLQRVGR
GCLARRRARGLRERRRLAGLAEAGVGQAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR000048IQ_motif_EF-hand-BS