prot_S-ischiensis_contig8.19396.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19396.1
Unique Nameprot_S-ischiensis_contig8.19396.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length83
Homology
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BLAST of mRNA_S-ischiensis_contig8.19396.1 vs. uniprot
Match: D8LEW9_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW9_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.980e-13
Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:   12 AEELAR-READARVTSLQTSILQLQQEQIETCLSFRVFAAGQLHVRYRMLRGFYAQLRCRVARRPERAERLCG 83
            AE++A+ RE + R  SL T+I   QQEQIETCL++R+FA GQLH RYR LR F+AQL  RV  R  +A  LCG
Sbjct:  788 AEDMAKQREFEERCQSLATAISLTQQEQIETCLTYRLFAVGQLHQRYRRLRLFFAQLGSRVGARESQATLLCG 860
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BLAST of mRNA_S-ischiensis_contig8.19396.1 vs. uniprot
Match: A0A6H5KBH4_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH4_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.990e-13
Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:   12 AEELAR-READARVTSLQTSILQLQQEQIETCLSFRVFAAGQLHVRYRMLRGFYAQLRCRVARRPERAERLCG 83
            AE++A+ RE + R  SL T+I   QQEQIETCL++R+FA GQLH RYR LR F+AQL  RV  R  +A  LCG
Sbjct:  793 AEDMAKQREFEERCQSLATAISLTQQEQIETCLTYRLFAVGQLHQRYRRLRLFFAQLGSRVGARESQATLLCG 865
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEW9_ECTSI2.980e-1357.53USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KBH4_9PHAE2.990e-1357.53USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1186440..1186688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19396.1mRNA_S-ischiensis_contig8.19396.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1186440..1186689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19396.1 ID=prot_S-ischiensis_contig8.19396.1|Name=mRNA_S-ischiensis_contig8.19396.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=83bp
AAAVRGPGGGAAEELARREADARVTSLQTSILQLQQEQIETCLSFRVFAA
GQLHVRYRMLRGFYAQLRCRVARRPERAERLCG
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