prot_S-ischiensis_contig8.19390.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19390.1
Unique Nameprot_S-ischiensis_contig8.19390.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length246
Homology
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: A0A6H5JC42_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC42_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 8.760e-59
Identity = 113/246 (45.93%), Postives = 157/246 (63.82%), Query Frame = 0
Query:    1 MQGGDGEGKEVETVEEGRPRTVPAAPAGTADPPGAVFAAIGQVASMMNQPRSRCALMLVSYISAMLFMLTLVLARGLSLSVWTWVIYGAMLMSSCSWLVHIMQESVTLTGGQTRAGQRRISQAALERRMLLRHPGLDLRRLQLMLTDRDFNSEDYQALLSLDEDNEVPSTVGATDAEIRRNPSFLVGSDE-DGSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG 245
            ++G DG    +   EEG   T+  +P  TA    A     G + + +   RSR  + L+     M+ + +LV    L+ ++  W  +G++L+ S   LV ++     +     R  ++RI + ALE R+ L HPG++L RL+L+L DRDF  EDYQALL LDE+N+VPSTVGA++ EI+RNPSF++     D  +KP++CS+CLY F+  E VR IPCLHQFHTECIDPWLRQNAICPVCKFPA+G
Sbjct:    2 LEGADGGNASLSNAEEGGAATI--SPRDTASRRSA-----GPLRASLIPLRSRRFVGLL----LMICVFSLVQVGVLNWTLMAWGFFGSLLVVSLFRLVRLVN-GYAIRSDTARRRRQRIPRGALEARLQLHHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNDVPSTVGASEGEIKRNPSFVIPEPAADSVVKPKNCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 235          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: A0A836CGW1_9STRA (Ubiquitin-protein ligase/ zinc ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.470e-43
Identity = 74/127 (58.27%), Postives = 91/127 (71.65%), Query Frame = 0
Query:  120 ISQAALERRMLLRHPGL-DLRRLQLMLTDRDFNSEDYQALLSLDEDNEVPSTVGATDAEIRRNPSFLVGSDEDGSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG 245
            +++   E RML RHP L +  RL L+L DRDF+ +DYQ LL LD DN  P+ VGAT+AEIRRNP F V  + D     RSCS+CL+ F  GE VR +PCLHQ+H+ECID WLR NA CP+CKFPA+G
Sbjct:  118 VTRTQWESRMLARHPQLANGGRLALLLMDRDFDGDDYQMLLELDADNVAPAAVGATEAEIRRNPCFTV-QESDAKQLARSCSICLHTFCAGEEVRIVPCLHQYHSECIDEWLRMNATCPICKFPAVG 243          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: W7T4H0_9STRA (Zinc finger, RING-type n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4H0_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.420e-31
Identity = 68/135 (50.37%), Postives = 85/135 (62.96%), Query Frame = 0
Query:  111 GQTRAGQRRI--SQAALERRMLLRHPGLDLRRLQLMLTDRDFNSEDYQALLSLDEDNE-VPSTVGATDAEIRRNPSFLVGSDEDGSLKPRSCSVCLYQFQRGESVRTIPCLHQFH-TECIDPWLRQNAICPVCKF 241
            G+   G RR+   Q A+E  + L   G D  RLQLML DRDF+SEDY+ L  LDED +     +GATDAE+ R P+++V    D   K   C +CL  F +GE VR +PCLHQFH +EC DPWLR+   CPVCKF
Sbjct:   70 GRRSGGVRRLIGHQIAVEEGIALSRRGTDSSRLQLMLMDRDFSSEDYEVLSRLDEDEQDACHLLGATDAELERLPTYIV----DTETKLNKCFICLNDFLKGEVVRILPCLHQFHQSECCDPWLRRKMECPVCKF 200          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: A0A1V9YIN4_9STRA (RING-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIN4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.580e-29
Identity = 57/111 (51.35%), Postives = 70/111 (63.06%), Query Frame = 0
Query:  141 LQLMLTDRDFNSEDYQALLSLDEDNEVPSTVGATDAEIRRNP------SFLVGSDEDGSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG 245
            LQL+LTDRDF+S DY+ LL LD+ N V  + GA+D EI R P      S L G  +   L+   CS+CL     G   R +PC H+FH ECIDPWL + A CP+CKFPAIG
Sbjct:   82 LQLLLTDRDFDSNDYEQLLQLDDHN-VQKSHGASDGEIDRLPVVTVTESMLKGHKDTTGLENIQCSICLEDLTLGSQARMVPCFHRFHPECIDPWLSEKAECPICKFPAIG 191          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: A0A485LC69_9STRA (Aste57867_17819 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC69_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.370e-28
Identity = 60/126 (47.62%), Postives = 77/126 (61.11%), Query Frame = 0
Query:  126 ERRMLLRHPGLDLRRLQLMLTDRDFNSEDYQALLSLDEDNEVPSTVGATDAEIRRNP------SFLVGSDEDGSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG 245
            ER+ LL  P      + L+LTDRDF+S DY+ LL LDE+N V  + GATD EI R P      S L  +++ G  +   CS+CL     G   R +PC H+FH +CIDPWL+  A CP+CKFPAIG
Sbjct:   91 ERQRLLLSPT----EINLLLTDRDFDSNDYEQLLMLDENN-VKKSHGATDVEIDRLPVVTVSESMLQSTNKGGVPEDLKCSICLEDLVVGSQARMVPCFHRFHPQCIDPWLKDKAECPICKFPAIG 211          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: A0A6G0WUI5_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUI5_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.310e-27
Identity = 58/123 (47.15%), Postives = 74/123 (60.16%), Query Frame = 0
Query:  126 ERRMLLRHPGLDLRRLQLMLTDRDFNSEDYQALLSLDEDNEVPSTVGATDAEIRRNPSFLVGSD---EDGSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG 245
            ER+ LL  P      + L+LTDRDF+S DY+ LL LDE+N V  + GATD EI R P   +      + G  +   CS+CL +   G   R +PC H+FH  CIDPWL+  A CP+CKFPAIG
Sbjct:   81 ERQRLLLSPA----EINLLLTDRDFDSNDYERLLLLDENN-VKKSHGATDFEIDRLPVVTISESMLSKGGVEEDLKCSICLEELSVGSQARMVPCFHRFHPACIDPWLKDKAECPICKFPAIG 198          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: A0A397AU11_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AU11_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.980e-27
Identity = 55/125 (44.00%), Postives = 76/125 (60.80%), Query Frame = 0
Query:  126 ERRMLLRHPGLDLRRLQLMLTDRDFNSEDYQALLSLDEDNEVPSTVGATDAEIRRNP-----SFLVGSDEDGSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG 245
            ER+ LL  P      + L+LTDRDF+S DY+ LL LDE+N V  + GATD EI R P       ++ + + G ++   CS+CL +   G   R +PC H+FH  CIDPWL+  A CP+CK+PA+ 
Sbjct:   52 ERQRLLLSPS----EINLLLTDRDFDSNDYERLLLLDENN-VKKSHGATDFEINRLPVVTMSESMLNASKGGVVEDSKCSICLEELVVGTKARMVPCFHRFHPGCIDPWLKDKAECPICKYPAVA 171          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: A0A6A5AB72_9STRA (RING-type domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AB72_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.940e-26
Identity = 55/125 (44.00%), Postives = 76/125 (60.80%), Query Frame = 0
Query:  126 ERRMLLRHPGLDLRRLQLMLTDRDFNSEDYQALLSLDEDNEVPSTVGATDAEIRRNP-----SFLVGSDEDGSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG 245
            ER+ LL  P      + L+LTDRDF+S DY+ LL LDE+N V  + GATD EI R P       ++ + + G ++   CS+CL +   G   R +PC H+FH  CIDPWL+  A CP+CK+PA+ 
Sbjct:  105 ERQRLLLSPS----EINLLLTDRDFDSNDYERLLLLDENN-VKKSHGATDFEINRLPVVTMSESMLNASKGGVVEDSKCSICLEELVVGTKARMVPCFHRFHPGCIDPWLKDKAECPICKYPAVA 224          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: T0RQH0_SAPDV (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RQH0_SAPDV)

HSP 1 Score: 109 bits (272), Expect = 7.080e-26
Identity = 59/131 (45.04%), Postives = 76/131 (58.02%), Query Frame = 0
Query:  121 SQAALERRMLLRHPGLDLRRLQLMLTDRDFNSEDYQALLSLDEDNEVPSTVGATDAEIRRNP------SFLVGSDEDGSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG 245
            S A  ER+ LL    L    LQL+LTDRDF+S DY+ LL LD+ N V  + GA++ +I R P      + L    E    +   CS+CL     G   R +PC H+FH +CIDPWL + A CP+CKFPAIG
Sbjct:   69 SSARGERQQLL----LSRAHLQLLLTDRDFDSNDYEQLLQLDDHN-VAKSHGASEGDIDRLPVVTVTETMLQSHKEATGYETIQCSICLEDLAVGAQARMVPCFHRFHPQCIDPWLVEKAECPICKFPAIG 194          
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Match: A0A7S2EWT1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWT1_TRICV)

HSP 1 Score: 108 bits (271), Expect = 1.720e-25
Identity = 56/127 (44.09%), Postives = 73/127 (57.48%), Query Frame = 0
Query:  141 LQLMLTDRDFNSEDYQALLSLDEDN-----EVPSTVGATDAEIRRNPSFLVGSDED------------------GSLKPRSCSVCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAI 244
            L L+L+ RDF  +DY+ LL  ++++        +TVGAT+AEI R P  ++ S  D                  G+  PRSC +CL Q+Q  E VRT+PCLH FH  CIDPWLRQ A CPVCK  A+
Sbjct:   89 LGLVLSGRDFTGDDYERLLRFNDESGPALESAAATVGATEAEITRCPRRIISSAGDDLISGRTRSAGEAAAASGGTRGPRSCPICLEQYQISEEVRTLPCLHTFHCNCIDPWLRQKAECPVCKQSAV 215          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC42_9PHAE8.760e-5945.93RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CGW1_9STRA2.470e-4358.27Ubiquitin-protein ligase/ zinc ion binding protein... [more]
W7T4H0_9STRA1.420e-3150.37Zinc finger, RING-type n=2 Tax=Nannochloropsis gad... [more]
A0A1V9YIN4_9STRA3.580e-2951.35RING-type domain-containing protein n=1 Tax=Achlya... [more]
A0A485LC69_9STRA2.370e-2847.62Aste57867_17819 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WUI5_9STRA1.310e-2747.15RING-type domain-containing protein n=1 Tax=Aphano... [more]
A0A397AU11_9STRA4.980e-2744.00RING-type domain-containing protein n=1 Tax=Aphano... [more]
A0A6A5AB72_9STRA1.940e-2644.00RING-type domain-containing protein n=3 Tax=Aphano... [more]
T0RQH0_SAPDV7.080e-2645.04RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A7S2EWT1_TRICV1.720e-2544.09Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 199..239
e-value: 1.2E-7
score: 41.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 198..240
e-value: 2.0E-12
score: 47.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 199..240
score: 12.194
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 160..243
e-value: 8.7E-20
score: 72.2
NoneNo IPR availablePANTHERPTHR45931FAMILY NOT NAMEDcoord: 106..244
NoneNo IPR availablePANTHERPTHR45931:SF3E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATEDcoord: 106..244
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..245
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 198..242
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 55..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1136323..1142222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19390.1mRNA_S-ischiensis_contig8.19390.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1136146..1143608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19390.1 ID=prot_S-ischiensis_contig8.19390.1|Name=mRNA_S-ischiensis_contig8.19390.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=246bp
MQGGDGEGKEVETVEEGRPRTVPAAPAGTADPPGAVFAAIGQVASMMNQP
RSRCALMLVSYISAMLFMLTLVLARGLSLSVWTWVIYGAMLMSSCSWLVH
IMQESVTLTGGQTRAGQRRISQAALERRMLLRHPGLDLRRLQLMLTDRDF
NSEDYQALLSLDEDNEVPSTVGATDAEIRRNPSFLVGSDEDGSLKPRSCS
VCLYQFQRGESVRTIPCLHQFHTECIDPWLRQNAICPVCKFPAIG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD