prot_S-ischiensis_contig8.19387.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19387.1
Unique Nameprot_S-ischiensis_contig8.19387.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length1575
Homology
BLAST of mRNA_S-ischiensis_contig8.19387.1 vs. uniprot
Match: D8LET6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET6_ECTSI)

HSP 1 Score: 600 bits (1547), Expect = 1.370e-177
Identity = 528/1578 (33.46%), Postives = 726/1578 (46.01%), Query Frame = 0
Query:    1 MAFHRMRRQRPETIREVETRPIVEKLLEVIKANNMELEEWFDVLDQMKRPDGFVTPVEMARGMRLVQQGLRAKGVDGVSLAHDQIKELFQYMDADASGRLDLREVALACNIERFKSESWKEMLRVAQMMQALEDHMDKHNLRIRDLFNILDGDHSDGLSIAELRCGLQAIIEEAETLHQERQRRRXRAEERQAALEQRLADLETLIEAHGKERPPWIQDPAFVRQGGVSTGAVARDREEEEEALWPMTMNGVTYELAREREPEEMLVAYFRRPGEGDGEAVGLRMHWQEALINVRDRVTDMLEYNDKNKYVGNALIRMPPDGPSLLASTASPGGAALADPPLRYIDTEEEWHRALAAQFALGSQRRLHAVMRWRQAQLEALRG---EDPGLHAGA----LGEVLEFIHNPGNMWAVTEELLAAVVPLVRAPRSEADAAGARAAAVVWKLSEYQDFIAPLLRSSAXXXXXXXXXXXXXXXXXXXXXPAVPP--GPLSYPMQLTLQAHAVGALSRLAHAEPALDAASRARAAAALVRVVARVPGALEARREVRTGVEGRAVPLAAGALMHLLEGSSRLRAVVARREG-FPLLGEALRPP-----------------GGRPTAAVACAARSLAAIATRSAAWLVPRPRLIAAAAALAALLSWCLDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAAR------FVPFILESSAAALWGCVTVLRGPTGPGGGADR--------RGSLGSVDALSVSGXXXXXXXXXXXXXXXXAVIDSRSGA---AGXXXXXXXXXXXXXXXXXXXXXSVDEDPGAVMAACAQVLLRLMA---------RASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------QXXXXXXXLVSAAVLGAAGATLTALVGLVDIKERPPGALAGLLALLTPAAATAAREQAVLAFGAVAGE----------EHARVTAAPHGWEEGGGGSGSGRPRGNDDGRLPSSEPAGG--------WRNFCRALLAGAGARVLLDCASASPALG-NSAPLRERAARALALVCLSAPPTPAGPDVALGVTAMLRCRQGXXXXXXXXXXXXXXXXXXXXXXXAAWALGRCPANREAFARLRAPACLF--------SLAEWSLGSGFGDAHRFSLAALWL-------LCHEPRNADQILRRPGSLARLVRWALPPPERAEPRDM----TDADNAAAACCLGAVRRCLARPEGMAVLAEEKASYELLELVLRLLRAPRRCRTVLPATLREAAGLLFALQDRAEYRAYCNCICRNE-FAVEDTLVRQLDRPLPLHAGLVRDVVVAVGSLSMVLSSRARLAVNGTITRVTDAVLRGASAAGHGAXXXXXXXXXXXXXXEGGAMGGVKLLKNLSAVPASHKDLCGRPL-PLLARLCDPSAVPVAMTLAGLACQIMANLCRSPVQGVRNRLYKIQLAGGSREVVRHSGLAAAVAIAGKVRRETPVVEEGRSTPKYNSSPCRQPELEGCTKDGSV--LYCSCFGQDGFDQ---------------VPALADRMAIQRD--------LRATPAALWG 1453
            MAF R+RR+  +  +    + IVE+LL  I+ N M +  WF+++DQ+   +  +   E ++GM ++Q     +    V L+ +QI+ELF YMDA+  G L L EVALAC +E +K+ S +EM  +  MMQAL+D+M  H ++IRDLF  LD D SDGLS AE+RCG  AI  EA+   +      X      A  E    D   + EA  +E    +     +   G +   +A    + +   W    NG+ Y+ AR R P + L+ YFR     DG   G+ MH +E L NV  RVT + +YND +KY G A I  P  G    A+ +S   A ++ P LRYI+T+ EW   +  QFA  S+ RLH + +W + QL  L     ++P + A A    LGEV+EF++NP N+WAVT E+L  +V  +RAP+SE+D A   AA ++WKLSEY+DF+ PLLR+ A                        PP  GPL Y +Q+++Q    G L R+  A  ++D   R R A+AL+ VVAR  G LEAR++ R G +G+ +  A+ AL +L+  S+ +R  +A R   F  L  ALRP                  GG P  AVACAA  LA + T  +A L+ R ++++A   L+ LL  C+D+                                    AA        V  ++ES+  ALWGC++ L   T       R         GS+GS D   +S                  +  +  GA   AG                          P  +++ CA  LL L++         R+S+                                                    V  +++  AG+ L+ +   +D+   PPGA+  +LALL P+A    R+QA L   A+AG+          E A V AA   W  G            DD      +  GG        W  FC  ++ G GA+++LDCA   P+   NS  LRERAA A +LVCL A   PA   V  G+ ++LRCR G                       A WAL R P NR+AFA+ R    L         +L   +L    G    F    L         L  EP NA QI    GS+A+LV WA P        D+    T  DNA  A CLG +RRCL  PEGM  LA+  ASY L++LVL+LLR     ++VLP TLREA G+LFA+QDRAEYR YC  IC  + F VEDTL  QL RP   +A L  D VV + SLS+ L+SR RLAVNGT+  V   + R  +    G                       KLLKNLS+VP +H+ L  RPL PL+ RL + S  P   T + LAC ++ANL RS V GVRNRL+++ LA  S  V R      A      + ++ P     R     +S+  R    E  ++D     L  S F +DGF +                  L  + A++RD        LR  PAALWG
Sbjct:    1 MAFRRVRRRYIDARKNSNIKSIVEELLGAIEGNGMTIRTWFEIMDQLSN-NNMINQSEFSKGMEMLQNHSTERMKQPV-LSAEQIQELFVYMDANHDGILVLNEVALACKVEHYKTTSSQEMDAITSMMQALDDYMGVHYMKIRDLFVHLDRDKSDGLSRAEIRCGFHAIQAEAKRKQEAAVXXXXXXXXXXAIRE----DEARIAEAKREEMDRLVYKQRRLSMAGEAAWILAPLTSQHDP--WVTEENGLLYKAARGRAPAQALIVYFRSYKPDDGPVYGVIMHPREFLGNVTMRVTLLFKYND-DKYAGPARILHPTGGAFEAANASS--AAFVSKPELRYIETDSEWRDVIGRQFASKSEARLHHISKWIRDQLATLSAAEEKEPRVSASAVKESLGEVMEFVNNPDNLWAVTREMLETIVSYIRAPQSESDEAPVLAATILWKLSEYEDFVLPLLRADAAGKCAAAIEELG------------PPRAGPLQYWLQVSVQTRVTGVLCRIGCAA-SVDGPVRLRVASALIAVVARPRGPLEARKDYREGADGKILSFASFALGNLVATSTSIRGSIAHRSSLFDALVSALRPATGGAGGARXGRSVGGVLGGSPLQAVACAAFCLAHVTTGESAPLLTRGKILSACLTLSGLLDVCVDQLEAGVGDSSSARGATDGSASEVFPITVPNDDAAGAAAATGESGTLSVTMVMESAGKALWGCLSHLSDSTNGDDSTSRSIRDSSSCEGSVGSPDRTELSSGGISGGASVDSGCQAPDLKGNEQGALSAAGIPSGNAEGGVSICGGDDSITDRPSMSPRHILSKCALTLLGLLSQVAKHHAHRRSSVGVESTGNDPNCKRMSRSGRTGSTSSTKVSSNIDHSETTGKSNSNGGNSSIGGVPHSIVAIAGSCLSRVAQDIDLAAGPPGAMESVLALLLPSAGLLVRQQAALTLSAIAGQGFQTLSDFRTEKAAVAAAAR-WSCGXXXXXXXXXXXXDDAAQWPGQGEGGRERKRLLLWGTFCAGVVEGTGAQIILDCALPGPSSRPNSRLLRERAALAFSLVCLCAGLRPASSAVQGGIVSLLRCRDGEVVGGAATA--------------ALWALCRVPVNRKAFAKTRCFDYLLLTSITRSRALVCCTLSENEGVVTSFCSKRLQKRQIYPISLLVEPENALQITNHGGSIAKLVSWATPLNGDHNSEDLSRMITVEDNAKTASCLGVIRRCLLLPEGMKALADGLASYSLIQLVLQLLRVGVWVKSVLPLTLREAQGVLFAVQDRAEYRGYCESICGGDPFGVEDTLALQLQRPGVKYAALAGDAVVGLASLSVTLASRRRLAVNGTVESVDRLLARSMAIESGGGREKGSKGDHEAVRNM------AKLLKNLSSVPEAHRRLSNRPLLPLITRLWEES--PDEAT-SQLACHVLANLSRSDVPGVRNRLFQLHLAAESEVVRRTRASGGAGTTPAPIAKQKPSAAVPRQGFAASSTATRAQHGETNSRDDDTVSLSSSVFRRDGFVEGHRYKGNGCTSDAKSAAVLLSQEALRRDARRDAQYRLRLMPAALWG 1530          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LET6_ECTSI1.370e-17733.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..212
NoneNo IPR availableGENE3D1.10.238.10coord: 7..194
e-value: 1.1E-11
score: 46.6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 886..1574
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 867..885
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 861..866
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..837
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 838..860
IPR002048EF-hand domainSMARTSM00054efh_1coord: 36..66
e-value: 45.0
score: 4.4
coord: 142..170
e-value: 4.6
score: 12.4
coord: 84..112
e-value: 5.6
score: 11.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 51..69
score: 5.308
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 138..173
score: 7.846
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 80..115
score: 9.13
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 93..105
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 36..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1091501..1104684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19387.1mRNA_S-ischiensis_contig8.19387.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1091492..1115270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19387.1 ID=prot_S-ischiensis_contig8.19387.1|Name=mRNA_S-ischiensis_contig8.19387.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=1575bp
MAFHRMRRQRPETIREVETRPIVEKLLEVIKANNMELEEWFDVLDQMKRP
DGFVTPVEMARGMRLVQQGLRAKGVDGVSLAHDQIKELFQYMDADASGRL
DLREVALACNIERFKSESWKEMLRVAQMMQALEDHMDKHNLRIRDLFNIL
DGDHSDGLSIAELRCGLQAIIEEAETLHQERQRRRRRAEERQAALEQRLA
DLETLIEAHGKERPPWIQDPAFVRQGGVSTGAVARDREEEEEALWPMTMN
GVTYELAREREPEEMLVAYFRRPGEGDGEAVGLRMHWQEALINVRDRVTD
MLEYNDKNKYVGNALIRMPPDGPSLLASTASPGGAALADPPLRYIDTEEE
WHRALAAQFALGSQRRLHAVMRWRQAQLEALRGEDPGLHAGALGEVLEFI
HNPGNMWAVTEELLAAVVPLVRAPRSEADAAGARAAAVVWKLSEYQDFIA
PLLRSSAAAAAAAAAGTTTAVAVAAAAAPAVPPGPLSYPMQLTLQAHAVG
ALSRLAHAEPALDAASRARAAAALVRVVARVPGALEARREVRTGVEGRAV
PLAAGALMHLLEGSSRLRAVVARREGFPLLGEALRPPGGRPTAAVACAAR
SLAAIATRSAAWLVPRPRLIAAAAALAALLSWCLDRLDRGEAGGGSGPAA
SAAATAAAAGGRGGTAAAGADRAARFVPFILESSAAALWGCVTVLRGPTG
PGGGADRRGSLGSVDALSVSGGGGGGGRGGPSSPRPPAVIDSRSGAAGSG
ASPRGGGGGGGGPSGLSSSSVDEDPGAVMAACAQVLLRLMARASLSSRSS
STSGAATAATAAVSGGSGASSGGAAAAPPPPQPQPQPLPLVSAAVLGAAG
ATLTALVGLVDIKERPPGALAGLLALLTPAAATAAREQAVLAFGAVAGEE
HARVTAAPHGWEEGGGGSGSGRPRGNDDGRLPSSEPAGGWRNFCRALLAG
AGARVLLDCASASPALGNSAPLRERAARALALVCLSAPPTPAGPDVALGV
TAMLRCRQGGGGGGGGGGGGGGGGVIPACAAAAAWALGRCPANREAFARL
RAPACLFSLAEWSLGSGFGDAHRFSLAALWLLCHEPRNADQILRRPGSLA
RLVRWALPPPERAEPRDMTDADNAAAACCLGAVRRCLARPEGMAVLAEEK
ASYELLELVLRLLRAPRRCRTVLPATLREAAGLLFALQDRAEYRAYCNCI
CRNEFAVEDTLVRQLDRPLPLHAGLVRDVVVAVGSLSMVLSSRARLAVNG
TITRVTDAVLRGASAAGHGAGAAAAAAARGGGGGEGGAMGGVKLLKNLSA
VPASHKDLCGRPLPLLARLCDPSAVPVAMTLAGLACQIMANLCRSPVQGV
RNRLYKIQLAGGSREVVRHSGLAAAVAIAGKVRRETPVVEEGRSTPKYNS
SPCRQPELEGCTKDGSVLYCSCFGQDGFDQVPALADRMAIQRDLRATPAA
LWGKLGAQTATAAGARDSLAGEAVDLAPPPVAEGAGGGSGSFSGGGRNAS
VQGLGRAAGYTDPGRPRPASTAGGRRPQGGGNPAAATPPPPSPRGPSRAP
HWPARRPRPRYPGSGSTAWCPGPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair