prot_S-ischiensis_contig8.19379.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19379.1
Unique Nameprot_S-ischiensis_contig8.19379.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length320
Homology
BLAST of mRNA_S-ischiensis_contig8.19379.1 vs. uniprot
Match: D7G704_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G704_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.440e-35
Identity = 92/271 (33.95%), Postives = 128/271 (47.23%), Query Frame = 0
Query:   64 YNPHAMALALQPRPDAVTTTLDHFAGLLNLVLDGELSNRAAVLLCKALTDSCIVNAGPLH---LDVPERGG---------YLSAALRQTWRLAIEDQR-DEEDMHTVGDLQTIASWFQAWGASDDARGELMLEVHGLADALPGDWLWVMDHMEMAGGAEGFDLNDEVATEEVEEKALGLPPEAWGLDDLRAALRAGPARDWFHPSGCFT-CAVPGPRRAATFRCALSRVPGAIYGCLRDLDGARWTPPTFRMYTTGDMEEVLGPDVVQRLR 320
            ++P  MA  LQ     + + L     L+   L+        +L+ KA+TD+  V +  +     DV   GG          L  ALRQ W  A+  +  +  + H+  D    A+WFQAW AS           + + D LP DW WV++ +E    +EG  +  E+  E VEE  LGLPPE W L+D++ +L       WF          + GP R +TFR     VPGA+ GCL+D  G    PPTFRMYT GD+ +  G D V R R
Sbjct:  102 FDPTEMARLLQASGSGIDS-LWRMEELIETTLERGTPGGETLLILKAVTDAFFVASRAVDDGSADVRSNGGAFNGDNERDLLVPALRQAWEHAVRHRNGNPNEWHSSVDFHVTAAWFQAWEAS-----------YQVEDVLPADWTWVLEQLESQETSEGPHIEGELELEAVEELQLGLPPENWSLNDVKRSLLLVSDESWFREGQAMVDLRLFGPTRESTFRRVFFDVPGAVDGCLKDRAGVALIPPTFRMYTAGDIFDAFGDDAVVRSR 360          
BLAST of mRNA_S-ischiensis_contig8.19379.1 vs. uniprot
Match: A0A6H5J7D6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D6_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 2.590e-35
Identity = 110/337 (32.64%), Postives = 152/337 (45.10%), Query Frame = 0
Query:    3 TSESAMVDWGERNLIEDFGPNSDRRHGRHRDRERQAEAEARRPMDPRLLLW----PTVCDSDV-LFYNPHAMALALQPRPDAVTTTLDHFAGLLNLVLDGELSNRAAVLLCKALTDSCIVNAGPLHLD---VPERGGYLSA---------ALRQTWRLAIEDQRDE-EDMHTVGDLQTIASWFQAWGASDDARGELMLEVHGLADALPGDWLWVMDHMEMAGGAEGFDLNDEVATEEVEEKALGLPPEAWGLDDLRAALRAGPARDWFHPSGCFT-CAVPGPRRAATFRCALSRVPGAIYGCLRDLDGARWTPPTFRMYTTGDMEEVLGPDVVQRLR 320
            T  ++  D GE  LI+DFGP       +  D E  A        D  +  W      V D    + ++P  MA  LQP    + + L     L+   L+ E      +L+ KA+TD+  V +  +  D   +   GG LS          ALRQ W  A+  +     + H+  DL   A+WFQAW A+           + + D LP +W WV++ +E    +EG  +  E+  E VE   LGLPPE W LDD++ +L       WF          + GP R +TFR     VPGA  GCL+D  G    PPTFRMYT GD+ +  G D V R R
Sbjct:   74 TQLTSSKDEGEDRLIQDFGPGRRVHEAKDMD-EVGAAGRGTDCFDLSVKNWHRYVAAVGDRGRRVVFDPTEMARLLQPSGSGIDS-LWRMEKLIETTLEQETPGGETLLILKAVTDAFFVASRAVDDDSAAIWSYGGALSGDKERDLLVPALRQAWEHAVMHRNGSPNEWHSSVDLHVTAAWFQAWEAA-----------YQVEDVLPANWTWVLEQLESQETSEGPHIEGELVLEAVEGLQLGLPPENWSLDDVKRSLLLVSDERWFREGQAMVDLRLFGPTRESTFRRVFFDVPGAFDGCLKDRAGVALIPPTFRMYTAGDIFDAFGHDAVVRSR 397          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G704_ECTSI1.440e-3533.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7D6_9PHAE2.590e-3532.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1061826..1064503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19379.1mRNA_S-ischiensis_contig8.19379.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1061826..1064599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19379.1 ID=prot_S-ischiensis_contig8.19379.1|Name=mRNA_S-ischiensis_contig8.19379.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=320bp
MVTSESAMVDWGERNLIEDFGPNSDRRHGRHRDRERQAEAEARRPMDPRL
LLWPTVCDSDVLFYNPHAMALALQPRPDAVTTTLDHFAGLLNLVLDGELS
NRAAVLLCKALTDSCIVNAGPLHLDVPERGGYLSAALRQTWRLAIEDQRD
EEDMHTVGDLQTIASWFQAWGASDDARGELMLEVHGLADALPGDWLWVMD
HMEMAGGAEGFDLNDEVATEEVEEKALGLPPEAWGLDDLRAALRAGPARD
WFHPSGCFTCAVPGPRRAATFRCALSRVPGAIYGCLRDLDGARWTPPTFR
MYTTGDMEEVLGPDVVQRLR
back to top