prot_S-ischiensis_contig8.19287.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19287.1
Unique Nameprot_S-ischiensis_contig8.19287.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length283
Homology
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 7.890e-77
Identity = 121/188 (64.36%), Postives = 144/188 (76.60%), Query Frame = 0
Query:   27 ECGAPECIMCHERCNKTVGYLGLAARSAVLARGVEANEHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEVLGVERRGRRVRTVWPVAGWASVHSTEGYPILVPVQSKAFRRWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVPHVPP 214
            E G+PECIMCHER    +GYLGLA RS VL  GV  N H  +L RQ ++VG++GCQ+R G+D+ SEKV   PPG TCEVL  E+ GRRVR V P  GWAS  + +G  +L P++++AFRRWGRQRLH+G CGHAVH  CWD+YF SLLGR+ ANQ FDGRMSVDVNR EFFCPLCKSLSN L+ H+PP
Sbjct: 1275 EEGSPECIMCHERSGSLMGYLGLAQRSLVLGTGVAGNPHRGLLRRQMLIVGNYGCQMRRGIDVTSEKVKFFPPGGTCEVLVREQVGRRVRCVAPAVGWASTRTQDGSVVLDPLETQAFRRWGRQRLHVGLCGHAVHFSCWDAYFQSLLGRSNANQTFDGRMSVDVNRAEFFCPLCKSLSNTLIAHIPP 1462          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.700e-43
Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = 0
Query:   27 ECGAPECIMCHERCNKTVGYLGLAARSAVLARGVEANEHHEVLSRQFMVVGSHG-CQVRAGLDLDSEKVALLPPGRTCEVLGVERRGRRVRTVWPVAGWASVHSTEGYPILVPVQSKAFRRWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVPHVPPGMHPERLAAAGQ 226
            E GAP C+ CHER    + Y+G A RS  LA  +  +  H  L++++ V  SH  C VR+G DL S +V  L  GR   ++  E+RGRR+R   P  GW S  S++ + ++ P+    F++WG+ R+ +  CGH  H DCWDS++AS+L    + +  DGR ++DV R EF CPLCKSLSN+LVPH+PP +  +  AAAG+
Sbjct: 1369 EAGAPACLYCHERTGSALAYIGFAQRSNALAHAIADSPSHARLAQRYRV--SHRECLVRSGPDLGSAEVQRL--GRGTFLVVEEKRGRRLRVSHPTHGWISEFSSDRHRLVEPMSPYCFQQWGKTRVLVTLCGHVCHQDCWDSFYASVLQEMISEERVDGRHAIDVARREFLCPLCKSLSNVLVPHIPPDL--DVSAAAGE 1563          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 129 bits (324), Expect = 6.370e-30
Identity = 87/273 (31.87%), Postives = 116/273 (42.49%), Query Frame = 0
Query:   20 AAADLARECGAPECIMCHERCNKTVGYLGLAARSAVLARGVEANEHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEVLGVERRGRRVRTVWPVAGWASVHSTEGYPILVPVQSKAFRRWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQA--------------------------------------------------------------------FDGRMSVDVNRTEFFCPLCKSLSNMLVPHVPPGMHPERLAAA 224
            A A LARE GAP CI+CHE  N+ + Y  +A RS V++R +     HE+L+RQF VVG+ GCQ+R  ++L+S ++ LLP  R  EV  VE+R                                   WGR RLH+G CGHA H  C ++Y A+L  R   NQ                                                                     FDGR++++V   EF CPLCK+L N+LVPH+PP +    LA A
Sbjct: 1277 AEAPLAREKGAPVCIVCHESVNRNMCYGAVAQRSTVMSRAIGCAPEHELLNRQFRVVGNQGCQLRESVELNSRRLGLLP--RNAEVTIVEQR-----------------------------------WGRLRLHVGLCGHAAHAHCMEAYRATLRERHNMNQXXXXXXXXXXXXXXVRHPVVQLKFMLWLTVSTCCVQALLEXXXXXXXXXXXXNQAYXXXXXXXXXXXXXFDGRVAINVPGGEFMCPLCKNLGNVLVPHIPPALRASALAEA 1512          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A7S2WN15_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WN15_9STRA)

HSP 1 Score: 117 bits (292), Expect = 4.450e-27
Identity = 75/203 (36.95%), Postives = 105/203 (51.72%), Query Frame = 0
Query:   33 CIMCHERC-------NKTVGYLGLAARSAVLARGVEANEHH---EVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEV--------LGVERRGRRVRTVWP-----VAGWASVHSTEGYPILVPVQSKAFR--RWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVP 210
            CI+C  +C       N  +GYLG   RS      V    +    + LSR F VVG  GCQ+R   D+DS +VA L  G    +         G+  R   V+ V       + GWA++ S++GY IL P+    ++  RWG  R  L  CGH  HL C +++  SL  R+A +Q +DGR + +++  EF CPLCK LSN+LVP
Sbjct:   75 CIIC--KCDDADGENNGPLGYLGHVQRSRTAHLSVSGTSNKTTIDKLSRSFRVVGEKGCQLRQHEDMDSSEVACLSRGSIVTLKEKSIMPKFGLLSRRVFVQYVSQTDGKNIEGWANIQSSQGYIILSPLSPMCYKNTRWGCTRPILKLCGHTAHLHCVETHCLSLHQRSAGDQPYDGRFAANIDDGEFLCPLCKQLSNVLVP 275          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A7S2U9T5_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9T5_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.460e-26
Identity = 86/233 (36.91%), Postives = 117/233 (50.21%), Query Frame = 0
Query:   33 CIMCHERC-------NKTVGYLGLAARS------AVLARGVEANEHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEVLG------VERRGRRVRTVW-----PVAGWASVHSTEGYPILVPVQSKAFR--RWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVPHVPPGMHPERLAAAGQGAPLPLSSPRSSS 239
            CI+C  RC       N  +G+LG   RS      AV      +N+  + L+  + VVG  GCQ+RA   +DS  V  +P G   +V         +   RRV   +     P  GWASV S++GY IL P+    ++  RWG  R  +  CGHA HL C +++  SL  RAA  Q +DGR + +++  EF CPLCK LSN+LVP           A +   A LPLSS  S+S
Sbjct: 2120 CIIC--RCDDADGENNGPLGFLGHVQRSRSLQIRAVNESRTSSNDSEQNLTNAYRVVGDRGCQLRATEAMDSAAVVCVPTGSIVKVSRSKILPKYDILSRRVFVQYVLNGRPFEGWASVQSSQGYVILSPLVDICYQNSRWGSTRPIVKQCGHAAHLRCVETHCLSLHQRAAGEQPYDGRFAANIDDGEFLCPLCKQLSNVLVPRY--SHRAGAKAPSSDTATLPLSSVTSTS 2348          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: B8C846_THAPS (E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C846_THAPS)

HSP 1 Score: 119 bits (297), Expect = 2.470e-26
Identity = 88/245 (35.92%), Postives = 117/245 (47.76%), Query Frame = 0
Query:   33 CIMCHERC------NKTVGYLGLAARSAVL-------------ARGVEANEHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEVL--------GVERRGRRVRTVWP---------VAGWASVHSTEGYPILVPVQSKAFR--RWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVPHVPPGMHPERLAAAGQGAPLPLSSPRSSS 239
            CI+C  +C      N  +GYLG   RS V+             A G++ N         + VVG  GCQ+R+   +DS  VA LP G   EVL        G+  R   V+ + P         V GWAS+ S +GY IL P+ S  +   RWG  R  +  CGHA H  C +++  SL  R    Q+FDGR S ++   EF CPLCK LSN+L+P        E  A     +PL L++P SSS
Sbjct: 2304 CIIC--KCDXXXGGNGPIGYLGHVQRSRVMQLESKALLAKYGCADGLDLNN-------VYRVVGDKGCQLRSTESMDSAPVAFLPQGSIVEVLQSKISPQLGLMSRRVLVKHLAPEKQNVSDQTVQGWASMQSWQGYIILSPLSSLCYTNTRWGSTRPIIRQCGHAAHFKCAEAHCLSLFQRNENQQSFDGRFSANIKEGEFLCPLCKQLSNILIP--------EDNADVSSTSPLALTTPESSS 2531          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A7S2L6M7_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L6M7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.820e-25
Identity = 79/207 (38.16%), Postives = 102/207 (49.28%), Query Frame = 0
Query:   33 CIMCHERC------NKTVGYLGLAARSAVLAR------GVEANEHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEVL--------GVERRGRRVRTVWP-------VAGWASVHSTEGYPILVPVQSKAFR--RWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVP 210
            CI+C  +C      N  +GYLG   RS V         G       + L+  + V G  GCQ+R+   + S  VA LP G   EVL        G+  R   VR V           GWAS+ S  GY IL P+ +  +   RWG  R  +  CGHA HL C DS+  SL  RAA+NQ +DGR S ++   EF CPLCK LSN+++P
Sbjct:  922 CIIC--KCDDADGDNGPMGYLGHVQRSRVAQLSSKSILGQTGASGSDDLNNFYRVAGGKGCQLRSTESMGSAPVAFLPLGSIVEVLQSKISPQLGLLSRRVYVRHVTEHQNGSEAAQGWASIQSWHGYTILSPLNTLCYTNTRWGPTRPIIRQCGHAAHLKCVDSHCLSLHQRAASNQPYDGRFSANIEDGEFLCPLCKQLSNIVIP 1126          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A7S1VKD5_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKD5_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.570e-24
Identity = 77/209 (36.84%), Postives = 104/209 (49.76%), Query Frame = 0
Query:   33 CIMCHERCNKT-------VGYLGLAARSAVLARGVEAN-EHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEVLG---------VERR------------GRRVRTVWPVAGWASVHSTEGYPILVPVQS--KAFRRWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVP 210
            CI+C  RC+ T       +GYLG   RS        A  E  + L   + V G  GCQ+R    +DSE +  LP G    V           + RR            G+++ T     GWASV S+EGY IL P+ +   A  RWG  R  +  CGHA HL+C +++  SL  RAA  Q +DGR + +++  EF CPLCK LSN+L+P
Sbjct:  731 CIIC--RCDDTDGENNGPLGYLGHVQRSRYSQMRCSAEIEQDDRLFSTYRVSGHRGCQLRKTEAMDSEPLVCLPTGSLVSVGNTTVSDNYDILSRRVFVRHTEKAQGTGKQIVT----EGWASVQSSEGYVILSPLATLCSASSRWGSTRPIIRQCGHAAHLECVETHTLSLHQRAAGEQPYDGRFAANIDDGEFLCPLCKQLSNVLLP 933          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A7S1VIH2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIH2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.780e-24
Identity = 77/209 (36.84%), Postives = 104/209 (49.76%), Query Frame = 0
Query:   33 CIMCHERCNKT-------VGYLGLAARSAVLARGVEAN-EHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEVLG---------VERR------------GRRVRTVWPVAGWASVHSTEGYPILVPVQS--KAFRRWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVP 210
            CI+C  RC+ T       +GYLG   RS        A  E  + L   + V G  GCQ+R    +DSE +  LP G    V           + RR            G+++ T     GWASV S+EGY IL P+ +   A  RWG  R  +  CGHA HL+C +++  SL  RAA  Q +DGR + +++  EF CPLCK LSN+L+P
Sbjct: 1521 CIIC--RCDDTDGENNGPLGYLGHVQRSRYSQMRCSAEIEQDDRLFSTYRVSGHRGCQLRKTEAMDSEPLVCLPTGSLVSVGNTTVSDNYDILSRRVFVRHTEKAQGTGKQIVT----EGWASVQSSEGYVILSPLATLCSASSRWGSTRPIIRQCGHAAHLECVETHTLSLHQRAAGEQPYDGRFAANIDDGEFLCPLCKQLSNVLLP 1723          
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Match: A0A7S3GQQ7_9STRA (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQQ7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.020e-23
Identity = 75/208 (36.06%), Postives = 96/208 (46.15%), Query Frame = 0
Query:   23 DLARECGAPECIMCHERCNKTVGYLGLAARSAVLARGVEANEHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPGRTCEVLGVERR--GRRVRTVWPVAGWASVHSTE-------GYPILVPVQSKA-----------FRRWGRQRLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPLCKSLSNMLVP 210
            DL  E   PECI+C E+ N  VGYL     S VL      +   E L   F VV   G  V A    D+  + +LP G   E + VE R  GR ++   P  GW S++          G P  +P  SK            F + G  RLH   CGH +H DCWD +FA+   R   N      ++VDV R E  CPLCKS++N L+P
Sbjct:  764 DLYAEETVPECIICREKTNSPVGYLCFLQPSNVLRNAHLTSPDSEELMNVFRVVAFAGVNVHAEPQDDAAVLHILPQG---EHIHVENRDGGRWLKLRAPHTGWCSLYCNADDAPLAAGQPAPLPGNSKTIVNLHPVAELQFAKHGGTRLHASACGHTMHFDCWDMFFAANYARYTNNHRSAELLAVDVERGESLCPLCKSVTNTLLP 968          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8R4_9PHAE7.890e-7764.36E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A4D9D1X7_9STRA1.700e-4343.28E3 ubiquitin-protein ligase n=6 Tax=Monodopsidacea... [more]
A0A836CB31_9STRA6.370e-3031.87E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A7S2WN15_9STRA4.450e-2736.95E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Euc... [more]
A0A7S2U9T5_9STRA2.460e-2636.91E3 ubiquitin-protein ligase n=1 Tax=Attheya septen... [more]
B8C846_THAPS2.470e-2635.92E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira ... [more]
A0A7S2L6M7_9STRA1.820e-2538.16E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ske... [more]
A0A7S1VKD5_9STRA5.570e-2436.84E3 ubiquitin-protein ligase n=1 Tax=Grammatophora ... [more]
A0A7S1VIH2_9STRA5.780e-2436.84E3 ubiquitin-protein ligase n=1 Tax=Grammatophora ... [more]
A0A7S3GQQ7_9STRA1.020e-2336.06E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Spu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 32..237
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 32..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:354326..357481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19287.1mRNA_S-ischiensis_contig8.19287.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 354325..357481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19287.1 ID=prot_S-ischiensis_contig8.19287.1|Name=mRNA_S-ischiensis_contig8.19287.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=283bp
PRRRSDARLRQPGKGRAARAAADLARECGAPECIMCHERCNKTVGYLGLA
ARSAVLARGVEANEHHEVLSRQFMVVGSHGCQVRAGLDLDSEKVALLPPG
RTCEVLGVERRGRRVRTVWPVAGWASVHSTEGYPILVPVQSKAFRRWGRQ
RLHLGFCGHAVHLDCWDSYFASLLGRAAANQAFDGRMSVDVNRTEFFCPL
CKSLSNMLVPHVPPGMHPERLAAAGQGAPLPLSSPRSSSSALPAAAAATA
SPDGTADAGATTPSAAAPLRALSELIRWVSPAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like