prot_S-ischiensis_contig8.19285.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19285.1
Unique Nameprot_S-ischiensis_contig8.19285.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length201
Homology
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BLAST of mRNA_S-ischiensis_contig8.19285.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.230e-5
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0 
Query:  137 WPALQIPLLAWDLSALAVGAVSMAATATPHTPATPTPGSSTRVAAAQTLCLARLAQILLQPEFCV 201
            WP LQ+PLLAWDLS LA    ++  +A              R AA + +CLARLAQ+ +QPEFC+
Sbjct: 1869 WPVLQVPLLAWDLSTLAAALATLVHSA------------EQRRAAVRAVCLARLAQLCVQPEFCL 1921
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CB31_9STRA4.230e-546.15E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:349016..352295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19285.1mRNA_S-ischiensis_contig8.19285.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 349016..352295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19285.1 ID=prot_S-ischiensis_contig8.19285.1|Name=mRNA_S-ischiensis_contig8.19285.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=201bp
MGEGGAGGAGAAVATAADDPPTTVEAAWRRKGLELPLQCVWEGGDDGEQS
GLQRRVERLLHQQKRRVRGAIVNARLAAAGRSSQVPTGTAASSAATGTTP
RPHPATRAASTAAAAAATTRAARQAARALETRVDLAWPALQIPLLAWDLS
ALAVGAVSMAATATPHTPATPTPGSSTRVAAAQTLCLARLAQILLQPEFC
V
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