prot_S-ischiensis_contig8.19273.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19273.1
Unique Nameprot_S-ischiensis_contig8.19273.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length294
Homology
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: D8LEJ1_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ1_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.670e-34
Identity = 67/114 (58.77%), Postives = 86/114 (75.44%), Query Frame = 0
Query:  132 FSGVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPSKPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRKRLCPHPGVAG 245
            + G++V+FPF  PM PQ Q+MQR+++ALK ++HALLESPTGTGKS A+LC++LAWQR    R     AP+IF G RTH Q+EQ+V  ++ SPY PTMA LGSR RLC +P V G
Sbjct:   14 YYGIKVEFPFETPMVPQDQMMQRIIAALKSKRHALLESPTGTGKSAAMLCASLAWQRDELFRTGK--APQIFYGARTHTQLEQMVRVVKSSPYCPTMATLGSRARLCINPMVVG 125          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A7S2A579_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A579_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.130e-30
Identity = 68/132 (51.52%), Postives = 92/132 (69.70%), Query Frame = 0
Query:  125 LCCSSSWF-SGVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPS--KPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRKRLCPHPGVAGARPRGRDR 253
            LC  +S+F  G+++ +P+   M PQ Q+   +V AL+   H +LESPTGTGKS A+LC+TLAWQRH+ + N S     PRI+  +RTH+QV QLV  L+++PYRP MA+LGSR+RLC H  +   RPRGR R
Sbjct:  185 LCLQNSFFMGGIKIGWPYPVIMTPQRQMALHLVKALQNRMHVVLESPTGTGKSAAILCTTLAWQRHYAKTNCSDGSDVPRIYFCSRTHSQVAQLVDSLKKTPYRPRMAILGSRERLCIHRDL---RPRGRGR 313          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A7S2PA46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PA46_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.500e-29
Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 0
Query:  134 GVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPSKPAP-RIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRKRLCPHPGVAGARPRG 250
            G+++ +P+   M PQ Q+   ++ AL   KH +LESPTGTGKS A+LCS LAWQRHH +++  K    +I   +RTH+QV Q+V  L+++PYRP MA+LGSR+RLC H  +   +PRG
Sbjct:   64 GIKIGWPYPTVMSPQRQMAFHLIKALNSSKHVVLESPTGTGKSAAILCSVLAWQRHHWKKSGEKKEKVKIIYCSRTHSQVAQMVTSLKQTPYRPRMAILGSRERLCIHKSI---KPRG 178          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A812ZFR4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ZFR4_9DINO)

HSP 1 Score: 123 bits (308), Expect = 1.000e-27
Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 0
Query:  112 GVCAPVPCDVEESLCCSSSWFSGVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPSKPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRK 235
            G+ +  PC + ++       F GV V FPF +P+ PQ  V++ V+ AL   KHA+LESPTGTGK+ A+LC+ +AWQRH   +  S  AP++   TRTHAQV Q + EL+R+PYRP MAVLGSR+
Sbjct:  114 GMISGEPCPIVQAHARFKLNFGGVEVLFPFEQPLEPQRAVIRNVLEALTLGKHAVLESPTGTGKTAAVLCACIAWQRHRMRKTGS--APQVMFATRTHAQVRQAIRELKRTPYRPIMAVLGSRE 235          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A1Q9DHK7_SYMMI (Regulator of telomere elongation helicase 1-like n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DHK7_SYMMI)

HSP 1 Score: 122 bits (307), Expect = 1.330e-27
Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 0
Query:  112 GVCAPVPCDVEESLCCSSSWFSGVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPSKPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRK 235
            G+ +  PC + ++       F GV V FPF +P+ PQ  V++ V+ AL   KHA+LESPTGTGK+ A+LC+ +AWQRH   +  S  AP++   TRTHAQV Q + EL+R+PYRP MAVLGSR+
Sbjct:  113 GMISGEPCPIVQAHARFKLNFGGVEVLFPFEQPLEPQRAVIRSVLEALTLGKHAVLESPTGTGKTAAVLCACIAWQRHRMRKTGS--APQVMFATRTHAQVRQAIRELKRTPYRPIMAVLGSRE 234          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A812QM34_SYMPI (Rtel1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812QM34_SYMPI)

HSP 1 Score: 120 bits (302), Expect = 6.280e-27
Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 0
Query:  132 FSGVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPSKPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSR 234
            F G+ V FPF +P+ PQ  V+Q V+ AL   KHA+LESPTGTGK+ A+LC+ LAWQRH   +  S  AP++   TRTHAQV Q + ELRR+PYRP  AVLGSR
Sbjct:  244 FGGIEVLFPFEQPLEPQRAVIQNVLEALVLGKHAVLESPTGTGKTAAVLCACLAWQRHRMSKTGS--APQLMYATRTHAQVRQAIRELRRTPYRPITAVLGSR 344          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A5J4Y8V4_9CHLO (Fanconi anemia group J protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y8V4_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 1.150e-26
Identity = 63/117 (53.85%), Postives = 79/117 (67.52%), Query Frame = 0
Query:  133 SGVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQR---HHQERNPSKPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRKRLCPHPGVAGA 246
            SG  VQ P   P   Q  +MQ +  AL Q++HALLESPTGTGK++ALLC+TLAWQ+   H   R P  PAPR+F   RTHAQ++  V E+RR+ YRP M +L SR+R C HP +A A
Sbjct:  236 SGQIVQLP-VRPNRSQVLLMQSITVALLQKRHALLESPTGTGKTLALLCATLAWQQQQAHLAHRQPDAPAPRVFWAARTHAQIDHTVHEVRRTSYRPMMTILASRERFCLHPDIATA 351          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A448ZL92_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZL92_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.210e-25
Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 0
Query:  134 GVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHH-------------------QERNPSKPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRKRLCPHPGV 243
            G+++ +PF E M PQ Q+   ++ ALK++ H +LESPTGTGKS+A+LCS LAWQR+H                    E    +  PRI   +RTH+QV Q+VA L+++PYRP M +LGSR+RLC H  V
Sbjct:  456 GIKIGWPFPEIMTPQRQMAIHIIKALKRKLHVVLESPTGTGKSVAILCSVLAWQRYHIQTTTAIDGGSKVVTDPVSMEEEEEEGTPRIIYLSRTHSQVSQMVASLKKTPYRPKMTILGSRERLCIHKEV 584          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A7S4SS98_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SS98_9DINO)

HSP 1 Score: 114 bits (284), Expect = 1.490e-25
Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 0
Query:  118 PCDVEESLCCSSSWFSGVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPSKPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRKRLCPHPGVAGARPRGR 251
            PC +++S C          +  PF E +PPQ  VM+R + A ++ + ALLESPTGTGKS+ALL +TLAWQR       +  AP+I  G RTHAQ+ Q+VAEL+++PYRP MAV+GSR+ LC +  V  A  R R
Sbjct:   62 PCPLDQSRCVQRLHMCDTELLAPF-ELLPPQLAVMERSLRACERRQVALLESPTGTGKSVALLTATLAWQRRTFAAQGA--APQILYGVRTHAQLAQMVAELQKTPYRPRMAVIGSREHLCVNEAVRAAARRQR 192          
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Match: A0A812SWT3_9DINO (Rtel1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812SWT3_9DINO)

HSP 1 Score: 113 bits (282), Expect = 2.590e-24
Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = 0
Query:  108 DALYGVCAPVPCDVEESLCCSSSWFSGVRVQFPFAEPMPPQSQVMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPSKPAPRIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRKRLC 238
            D L  +  P P D++ + C          + FPF  PMPPQ QV    V A ++   A+L+SPTGTGKS+ALLCSTLAWQR   +   S  AP+I  G RTHAQ+ Q+VAELR+S YRP MAV+GSR +LC
Sbjct:  104 DRLDSLRDPRPKDLDLARCGHELRLGEDVLYFPFP-PMPPQCQVAAYAVRACERGGIAMLQSPTGTGKSLALLCSTLAWQRRRLQAVGS--APQILYGVRTHAQLSQIVAELRKSAYRPRMAVIGSRDQLC 231          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ1_ECTSI1.670e-3458.77Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S2A579_9STRA2.130e-3051.52Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A7S2PA46_9STRA4.500e-2949.15Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A812ZFR4_9DINO1.000e-2750.00Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A1Q9DHK7_SYMMI1.330e-2750.00Regulator of telomere elongation helicase 1-like n... [more]
A0A812QM34_SYMPI6.280e-2758.25Rtel1 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A5J4Y8V4_9CHLO1.150e-2653.85Fanconi anemia group J protein n=1 Tax=Trebouxia s... [more]
A0A448ZL92_9STRA1.210e-2545.74Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4SS98_9DINO1.490e-2548.51Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A812SWT3_9DINO2.590e-2451.15Rtel1 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010614DEAD2PFAMPF06733DEAD_2coord: 205..246
e-value: 3.7E-6
score: 26.7
NoneNo IPR availableGENE3D3.40.50.300coord: 144..278
e-value: 3.4E-27
score: 97.2
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 133..256
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 134..294
score: 15.161
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 126..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:286455..289793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19273.1mRNA_S-ischiensis_contig8.19273.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 286455..289822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19273.1 ID=prot_S-ischiensis_contig8.19273.1|Name=mRNA_S-ischiensis_contig8.19273.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=294bp
MEGAALAEWEAHTKGVGSRLLRGMGYDGTQRRARRATQALNSLVHDVATG
KGHERGVRRAGLGFGAAAARAAAVAQAAAAAAAAVAAEMARAGSAPTGGG
GSGAGQMDALYGVCAPVPCDVEESLCCSSSWFSGVRVQFPFAEPMPPQSQ
VMQRVVSALKQEKHALLESPTGTGKSMALLCSTLAWQRHHQERNPSKPAP
RIFLGTRTHAQVEQLVAELRRSPYRPTMAVLGSRKRLCPHPGVAGARPRG
RDREDEEEDDGDSSDGEAGSRLPHAATCLVHPVTPSQAAGFNTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010614DEAD_2
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3
IPR027417P-loop_NTPase