prot_S-ischiensis_contig8.19266.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19266.1
Unique Nameprot_S-ischiensis_contig8.19266.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length353
Homology
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: D8LM21_ECTSI (Stn1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM21_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 2.240e-42
Identity = 97/231 (41.99%), Postives = 135/231 (58.44%), Query Frame = 0
Query:   50 PVCQAYTRLFVRDVLALSTAGGMEDTHVFHG-KPISAAQVVGTVVGVLRKP-------AYVKFLLDDGTGMVWCTRWEQDSN-GAQHRAQRDAAAHGDLLVVQGKLRQFRGARELMVVNMRRTSDGSSEELQHWVEAVWLAKTCYCEPFKREDYADADMLGAPQGGRGGRRGATGPAAVCSCGSPYVAELGLCRCTALAAAPLPGQSDPAFVFRDALLRWLADREAKLPSP 271
            P+  +Y +L +RDV  L T GG++D+HV HG K I   +V G VV V  KP       +YVK++LDDGTG++ CT++E+ +  GA HR   +    G+LLVVQGKL+++RGARE+ + +  + +D + E L HW+  V L KT Y  PF+R+DY D +++      R  +         C CG+ Y   +G CRC    AAPL    DP F FRDALL  LA +E  L  P
Sbjct:   52 PLFWSYVKLLIRDVHGLGTLGGIDDSHVLHGNKAIHRVEVSGVVVHV--KPGATKASGSYVKYILDDGTGLLPCTQYERHAGTGATHRGHSERHELGELLVVQGKLKRYRGAREVAITSASKPTDPNQEAL-HWLRCVELGKTVYRPPFQRDDYIDEELVAGSSQARPTQ---------CGCGAAYAEAVGYCRCV---AAPLA--LDPTFEFRDALLARLAAKEESLAGP 265          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: A0A507D4J4_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D4J4_9FUNG)

HSP 1 Score: 83.6 bits (205), Expect = 3.770e-14
Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = 0
Query:   50 PVCQAYTRLFVRDVLALSTAGG-MEDTHVFHGKPISAAQVVGTVVG-VLRKPAYVKFLLDDGTGMVWCTRWEQDSNGAQHRAQRDAAAHGDLLVVQGKLRQFRGARELMVVNMRRTSDGSSEELQHWVEAVWLAKTCYCEPFK 190
            P+   + RLFV D+L + T    ++    +H  PI   QV G V G   R   Y   LLDDGTG++ C +W QD+NG    A R   + G L+ V+G++ +FRG+R++ V  M    + + E L+ W+E V L ++ Y +PF+
Sbjct:   30 PLLWTHARLFVSDLLRIITKHDTLQGIWWYHTHPIKKVQVSGIVAGREERVGRYRTILLDDGTGVIPCVQWTQDTNGYTPHANRCPLSLGSLVRVRGRITEFRGSRQITVDEMFLEPNVNYEYLR-WLEVVDLKQSIYDKPFQ 171          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: C3YXB5_BRAFL (Uncharacterized protein (Fragment) n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YXB5_BRAFL)

HSP 1 Score: 68.2 bits (165), Expect = 4.540e-9
Identity = 55/196 (28.06%), Postives = 86/196 (43.88%), Query Frame = 0
Query:   50 PVCQAYTRLFVRDVLALSTAGGMEDTHVF--HGKPISAAQVVGTVVGVLRKPAYVKFLLDDGTGMVWCTRWE--------QDS--------NGAQHRAQ------------------------RDAAAHGDLLVVQGKLRQFRGARELMVVNMRRTSDGS-SEELQHWVEAVWLAKTCYCEPFKREDYADADMLGA 202
            P+ +AY ++FVRDVL + T  G    +VF     P+S   ++G VV V  +     + +DDGTG++ CT W+        +DS         GA   A                         +  A  GDLL V+G+++ +RG RE+     R   D + S E+   ++ + L +  Y  PF+R +    D  GA
Sbjct:   14 PLHRAYVKMFVRDVLEMDTYPGHPAMNVFAYRNHPVSRVDLLGWVVRVEEREKLFNYAIDDGTGVIGCTCWKPRVQSTTGEDSMDDTDYSTTGASTSADSAEKEFADFLALKRREIKKCVRQLKQPARLGDLLHVRGRIKLYRGRREVGAAYFRHVDDPTCSIEINRTMKQLQLYQDFYDVPFQRGNGDSGDCTGA 209          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: A0A443N959_9MAGN (DNA repair protein RAD4 isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443N959_9MAGN)

HSP 1 Score: 68.2 bits (165), Expect = 9.420e-9
Identity = 45/146 (30.82%), Postives = 79/146 (54.11%), Query Frame = 0
Query:   55 YTRLFVRDVLALSTAGGMEDTHVFHGKPISAAQVVGTVVGVLRKPAYVKFLLDDGTGMVWCTRWEQDSNG---AQHR----------AQRDAAAH--GDLLVVQGKLRQFRGARELMVVNMRRTSDGSSEELQHWVEAVWLAKTCY 185
            + +L   D+L+L+        ++ HG+ +S A+ VG +VG  RKP ++KFL+DDGTG + C  W    +    ++H           A  +AAA   G L  V+G++  +RG  ++ V ++    D ++E L HW++ + +A+ CY
Sbjct: 1031 HIKLLASDLLSLTQIPNPVSFYL-HGRFVSRAETVGVIVGRERKPNFLKFLIDDGTGCIPCIIWLNHHSSPYFSRHHPSDLRLISQIATDEAAAIQLGALARVRGRINAYRGVIQINVTDVVIERDPNAEIL-HWLDCIRVARDCY 1174          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: A0A261Y6S0_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y6S0_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 2.110e-7
Identity = 37/140 (26.43%), Postives = 64/140 (45.71%), Query Frame = 0
Query:   50 PVCQAYTRLFVRDVLALSTAGGMEDTHVFHGKPISAAQVVGTVVGVLRKPAYVKFLLDDGTGMVWCTRWEQDSNGAQHRAQRDAAAHGDLLVVQGKLRQFRGARELMVVNMRRTSDGSSEELQHWVEAVWLAKTCYCEPF 189
            P+   + +LF+ D+  L       D + +    I   +V+G + G+ R  +   +++DDGT  ++C  W  D               G  L VQGK+ +FRGAR++ +  +    D  + E   W+ A+ L    Y +PF
Sbjct:   16 PLFWVHVKLFIVDIYRLKQGDVFNDVYRYGNHNIRHVEVLGLLRGIERSHSVTTYIIDDGTEAIYCVLWRTDP---------PLFPFGTRLTVQGKITEFRGARQITIHEVGIEKD-PNYETYFWLNAIKLKVDVYDKPF 145          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: D8SRZ7_SELML (OB domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SRZ7_SELML)

HSP 1 Score: 57.0 bits (136), Expect = 1.040e-6
Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 0
Query:   87 QVVGTVVGVLRKPAYVKFLLDDGTGMVWCTRWEQDSNGAQHRAQRDAA---AHGDLLVVQGKLRQFRGARELMVVNMRRTSDGSSE 169
            ++VG  V V RKP YV+F +DDGTG + C  W   S   Q +A  D A     G LL V G++ ++    +L V ++    D ++E
Sbjct:   23 EMVGVAVSVERKPKYVRFAVDDGTGCISCILWTNQSGAPQQQAAADMARLVTLGGLLAVHGRVSRYHHHPQLTVSSLLPQPDANAE 108          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: A0A6P5AB85_BRABE (CST complex subunit STN1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AB85_BRABE)

HSP 1 Score: 60.8 bits (146), Expect = 1.220e-6
Identity = 56/200 (28.00%), Postives = 88/200 (44.00%), Query Frame = 0
Query:   50 PVCQAYTRLFVRDVLALSTAGGMEDTHVF--HGKPISAAQVVGTVVGVLRKPAYVKFLLDDGTGMVWCTRW--------EQDSNGA-------QHRAQ---------------------RDAAAHGDLLVVQGKLRQFRGARELMVVNMRRTSDGS-SEELQHWVEAVWLAKTCYCEPFKR------EDYADADMLGAPQ 204
            P+ +AY ++FVRDVL +    G    +V+     PIS   ++G VV V  +     + +DDGTG++ CT W        E+D + A       Q  A+                     R      DLL V+G+++ +RG RE+  V  R   D + S E+   +E + L +  Y  PF+       ED  +A ++ A Q
Sbjct:   34 PLHRAYVKMFVRDVLEMDIYPGHPTLNVYAYRNHPISRVDLLGWVVRVEEREKLFNYAIDDGTGVISCTCWKPRVPVNTEEDIDYATPGTSTEQEAAEQEFTEFLALKTREIKKCVRELRQPVKLRDLLHVRGRIKSYRGRREVGAVYFRCVDDPTCSVEINRTMEQLQLYQDFYDVPFQPPGSQEGEDDTEAGVVKALQ 233          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: A0A0K9PAB9_ZOSMR (CST complex subunit STN1 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PAB9_ZOSMR)

HSP 1 Score: 57.0 bits (136), Expect = 2.970e-6
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 0
Query:   56 TRLFVRDVLALSTAGGMEDTHVFHG----KPISAAQVVGTVVGVLRKPAYVKFLLDDGTGMVWCTRWEQDSN----------------GAQHRAQRDAAAHGDLLVVQGKLRQFRGARELMVVNMRRTSDGSSEELQHWVEAVWLAKT 183
            T+L  R +L L           FH     + I   +++GTVV   RKP+++KFLLDDGTG++ C  W   ++                        +    G ++ V+G++  +R   ++ V ++    D +++ L HWV+ V LA+T
Sbjct:   11 TKLLCRHLLTLIVQCTRHPPIFFHPTNNKRRILRVEILGTVVSRERKPSFLKFLLDDGTGVIPCVIWLNQNSLHWKFARIQPSDLKLMAEMAMEDEETTVVGSVVRVRGQVCMYRDEIQIKVRDVMEERDPNAQTL-HWVDCVRLAQT 157          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: A0A8J9VBI9_BRALA (STN1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VBI9_BRALA)

HSP 1 Score: 58.9 bits (141), Expect = 5.190e-6
Identity = 47/184 (25.54%), Postives = 79/184 (42.93%), Query Frame = 0
Query:   50 PVCQAYTRLFVRDVLALSTAGGMEDTHVFHGK--PISAAQVVGTVVGVLRKPAYVKFLLDDGTGMVWCTRWEQ-----------------------DSNGAQH-----------------RAQRDAAAHGDLLVVQGKLRQFRGARELMVVNMRRTSDGS-SEELQHWVEAVWLAKTCYCEPFK 190
            P+ +A+ ++F+RDVL +    G    +V+  K  PIS   ++G VV V  +     + +DDGTG++ CT W+                         +N A+                  R  R     GDLL V+G+++ +RG RE+         D + S E++  +E + L +  Y  PF+
Sbjct:   32 PLHRAFVKMFIRDVLEMDNYPGHPALNVYAYKNHPISRVDLLGWVVRVEEREKLFNYAIDDGTGVIGCTCWKPRVQSTTGKGLIDDNDYSTTGASTSANSAEQEFAEFLASKMQEIKKCVRQLRQPVKLGDLLHVRGRIKSYRGRREVGAAYFHLVVDPTCSTEIRRTMEQLQLYQDFYDVPFQ 215          
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Match: A0A8C7HFD1_ONCKI (CST complex subunit STN1 n=24 Tax=Salmoninae TaxID=504568 RepID=A0A8C7HFD1_ONCKI)

HSP 1 Score: 57.0 bits (136), Expect = 2.190e-5
Identity = 45/177 (25.42%), Postives = 79/177 (44.63%), Query Frame = 0
Query:   50 PVCQAYTRLFVRDVLALSTAGGMEDTHVFHGKPISAAQVVGTVVGVLRKPAYVKFLLDDGTGMVWCTRWE-----------------------QDSNGAQH----RAQRDAAAH---GDLLVVQGKLRQFRGARELMVVNMRRTSDGSSEELQHWV-EAVWLAKTCYCEPFKREDYA 195
            P+  A+TRL+V+D+L +  +  +   + ++  PI    V+GTVV    +  +  + +DDGTG++    W+                       +D N A      R  + +++H   G+LL V+G ++  R  RE+M     + SD        W+ E   L + CY +PF  +  A
Sbjct:   26 PMFNAFTRLYVKDILQMRESCQVSGIYFYNSHPIFKVYVLGTVVYKREREDFFCYGVDDGTGVINSLCWKDEPWREQGDPATPGARSFGSSAREDFNPANELKKLRQAKHSSSHLEIGELLRVRGPVKTSRQQREIMASTYYKVSDPVMAVQISWMMEVPQLYRQCYDKPFHLDSSA 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LM21_ECTSI2.240e-4241.99Stn1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A507D4J4_9FUNG3.770e-1436.36Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
C3YXB5_BRAFL4.540e-928.06Uncharacterized protein (Fragment) n=2 Tax=Branchi... [more]
A0A443N959_9MAGN9.420e-930.82DNA repair protein RAD4 isoform X1 n=1 Tax=Cinnamo... [more]
A0A261Y6S0_9FUNG2.110e-726.43Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
D8SRZ7_SELML1.040e-636.05OB domain-containing protein (Fragment) n=1 Tax=Se... [more]
A0A6P5AB85_BRABE1.220e-628.00CST complex subunit STN1-like n=1 Tax=Branchiostom... [more]
A0A0K9PAB9_ZOSMR2.970e-627.03CST complex subunit STN1 n=1 Tax=Zostera marina Ta... [more]
A0A8J9VBI9_BRALA5.190e-625.54STN1 protein n=1 Tax=Branchiostoma lanceolatum Tax... [more]
A0A8C7HFD1_ONCKI2.190e-525.42CST complex subunit STN1 n=24 Tax=Salmoninae TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 49..191
e-value: 2.3E-25
score: 90.9
NoneNo IPR availablePANTHERPTHR13989:SF33CST COMPLEX SUBUNIT STN1coord: 73..185
IPR018856CST complex subunit Stn1, N-terminalPFAMPF10451Stn1coord: 74..179
e-value: 1.5E-6
score: 27.4
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 73..185
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 65..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:265057..267889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19266.1mRNA_S-ischiensis_contig8.19266.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 265057..267889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19266.1 ID=prot_S-ischiensis_contig8.19266.1|Name=mRNA_S-ischiensis_contig8.19266.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=353bp
CSRANDSAAGGMGPEPTLLGEEKKRGSQGSAFACKIPAHEQLQPSLPCPP
VCQAYTRLFVRDVLALSTAGGMEDTHVFHGKPISAAQVVGTVVGVLRKPA
YVKFLLDDGTGMVWCTRWEQDSNGAQHRAQRDAAAHGDLLVVQGKLRQFR
GARELMVVNMRRTSDGSSEELQHWVEAVWLAKTCYCEPFKREDYADADML
GAPQGGRGGRRGATGPAAVCSCGSPYVAELGLCRCTALAAAPLPGQSDPA
FVFRDALLRWLADREAKLPSPPPGGGGGGGGGGGDDSDDGNSGHVGDVDQ
PETLHFRYRDLYADAHLRDVARAVLLGQAGAAAAVEPGRGAPEKQHRARP
SDG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018856Stn1_N
IPR040260RFA2-like
IPR012340NA-bd_OB-fold