prot_S-ischiensis_contig8.19264.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19264.1
Unique Nameprot_S-ischiensis_contig8.19264.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length282
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19264.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 130..161
e-value: 5.3
score: 16.0
coord: 19..51
e-value: 23.0
score: 13.9
coord: 56..88
e-value: 0.018
score: 24.2
coord: 93..125
e-value: 5.3
score: 16.0
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 11..163
e-value: 5.5E-15
score: 55.1
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 7..192
e-value: 3.9E-24
score: 87.2
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 79..159
coord: 21..84
NoneNo IPR availablePANTHERPTHR13068:SF36TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTICcoord: 79..159
NoneNo IPR availablePANTHERPTHR13068:SF36TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTICcoord: 21..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:257623..261007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19264.1mRNA_S-ischiensis_contig8.19264.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 257623..261007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19264.1 ID=prot_S-ischiensis_contig8.19264.1|Name=mRNA_S-ischiensis_contig8.19264.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=282bp
MDRQGRWDWGLGLDKEAMRRVIRRQADLLYKNVENKLSDNVAYFVKDVGL
TWEEMRRLVIRAPVLLCMSVDKNLRPTEAYLTGELGMERNKFKMTVLNQP
SLLTMSVATNIRPKVTLFREELGAQPWEVADMLSACPRVMSASVKARILP
RMKVMLDGGLTPTFDDVRQLCTYTDPRFSTWLSRAIAKQQVSKEASAALA
TAGAGSAAAAAAGGDMAAAATGAGGAAATTLVPAPAAAAAGVGRELHPRS
LSVAGGRGGGQPPRSLHAQSLAELGISYQVDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf