prot_S-ischiensis_contig78.19130.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig78.19130.1
Unique Nameprot_S-ischiensis_contig78.19130.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length331
Homology
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BLAST of mRNA_S-ischiensis_contig78.19130.1 vs. uniprot
Match: D7G2A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2A1_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.200e-23
Identity = 63/118 (53.39%), Postives = 77/118 (65.25%), Query Frame = 0 
Query:  141 SPMDIYADRAALLRELTKGMKPDRRLSFQTRVANGRNRESMEALFRDFGEHLAMLTLPHVRSREMDLEQVKKDTTRERVSLDGEDMRFLGSPSDNPHGWHDELWATVEARVTAGLLGG 258
            S +D Y+  AALLREL K M  D+RLSFQTRVAN R +ES+E++  D+ E L  L LPH RSREMDL+QVKK   R   S  G      G+   +P  WH+ELWAT+EARV   +L G
Sbjct:  166 SNVDYYSAPAALLRELVKEMPADKRLSFQTRVANARTKESIESVLEDYAERLESLVLPHARSREMDLQQVKKTGKR---SFSG------GALPTSPTTWHEELWATLEARVMESVLSG 274
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig78.19130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2A1_ECTSI1.200e-2353.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig78contigS-ischiensis_contig78:634998..640000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig78.19130.1mRNA_S-ischiensis_contig78.19130.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig78 634996..640000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig78.19130.1 ID=prot_S-ischiensis_contig78.19130.1|Name=mRNA_S-ischiensis_contig78.19130.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=331bp
DLSASSCVVCPPSEWAGGSPSLVARLWSNRPLRCLPSRDAMAAGPLVGDA
LLELAVAKQLADVLGAWHAEGEDTDDERAAAVAAAGPATKGDEFRLVTPP
PTVEAPERWAGPRRDPKHYSGHGRRRPRKKASRALNGSSSSPMDIYADRA
ALLRELTKGMKPDRRLSFQTRVANGRNRESMEALFRDFGEHLAMLTLPHV
RSREMDLEQVKKDTTRERVSLDGEDMRFLGSPSDNPHGWHDELWATVEAR
VTAGLLGGGNGAAGAGGGGASGGSRSKGKGRWWPGTSTTTAAKTPSLSLS
PTRPGKYDDEEVKDGSRQQLPHDAAALSEGG
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