prot_S-ischiensis_contig73.18686.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig73.18686.1
Unique Nameprot_S-ischiensis_contig73.18686.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length786
Homology
BLAST of mRNA_S-ischiensis_contig73.18686.1 vs. uniprot
Match: D8LMJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ5_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 2.640e-62
Identity = 146/394 (37.06%), Postives = 210/394 (53.30%), Query Frame = 0
Query:  238 EGAPQGPTDAKGLLKGLG----AKAAGMAKKGAQLMQQMAGD----RIPPHKTEWWAKEACLKRCNCGDGVPADNPAYVPVPERPS------------TAPIE------ENREQWNTPTKFPPTSDAIRQFIEYSDARTAGQYSRVCVGWHEECHAEGEEGRPFHPTYTGMHSLVLQSALDAHDNKVDAIFFHQPTVVHQGRLFTAGDKKVRVWEFTGVQEPEDADPDTANQSQDAQDTSQTTGSSTEAEAMAAEGEYSQCEPTLQQLEAWKAVAVAMRDTAPLTLVKRVNGSMLCCSSNGNMSEWALANKLQNIVFRGQFWEHNRRINDVVFSLPSAGYCEAHGTPDHVCLMYSVSDDRLLKVWDLSSRRCLHTIRPRIADCGTLQSVARSDF 605
            +G P+ P   KGLL GLG    A+AA +AK     +Q + G+      PP     WA+ AC +RCNC  GVP D+ A+VP+ E               T P+E      ENR       + PP    +R F+EY D+RT  + +     WH EC+   EEG P HP Y GMH + L S +DA  +K+D +FFHQP     G+LFTAG ++V  W        ++ + DT  +   A + S +T S   +E   +EG+ +   P ++   +W++  V +RDTAP T++  VN        N NM+ +  AN     +     W+         F+ PS G+C+AHG P H C MYSVSDDR LKVWDL+++ CLHT++P+I+DCGT+ +V ++ F
Sbjct:   96 DGTPKKPK--KGLL-GLGDRLAARAAAIAKTAGNALQAVTGEGRRRETPP-----WARAACFRRCNCNHGVPTDSTAFVPLQEGRKLEHEAVGVVTVRTEPLEGAELEFENRPPLE---RTPPPPYVLRLFLEYMDSRTVARCAHTSKEWHRECYQRNEEGVPMHPAYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSPGQLFTAGQRRVTAWRR------QETEVDTEREQSTASEGSGSTKSGESSETSHSEGDAA---PRIEV--SWQSAGVCLRDTAPFTMILPVNSRP---RKNPNMA-FHSANTSSCFLA----WQ--------AFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKDCLHTVKPKISDCGTVWNVPKASF 451          
BLAST of mRNA_S-ischiensis_contig73.18686.1 vs. uniprot
Match: A0A6U4D539_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D539_9STRA)

HSP 1 Score: 221 bits (564), Expect = 7.390e-60
Identity = 147/474 (31.01%), Postives = 222/474 (46.84%), Query Frame = 0
Query:  281 KTEWWAKEACLKRCNCGDGV---------PADNPAYVPVPERPSTAPI--EENREQWNTPTK-FPPTSDAIRQFIEYSDARTAGQYSRVCVGWHEECHAEGEEGRPFHPTYTGMHSLVLQSALDAHDNKVDAIFFHQPTVVHQGRLFTAGDKKVRVWEFTGVQEPEDADPDTANQSQDAQDTSQTTGSSTEAEAMAAEGEYSQCEPTLQQLEAWKAVAVAMRDTAPLTLVKRVNGSMLCCSSNGNMSEWALANKLQNIVFRGQFWEHNRRINDVVFSLPSAGYCEAHGTPDHVC-LMYSVSDDRLLKVWDLSSRRCLHTIRPRIADCGTLQSVARSDFHLFAGTSNGRVVVYGLGRVCRRAERHECDLHEQ-PLWFCLQETLQHGSEAITCMQCGGLGGAFKYLFTASADGSIKVWQTEPHHSFNHEVVTTFKQHER--KITCLCLSHAHIFSACDGGRLCVWSLGTLTLQRVV 738
            KT  WA++  LKRCNC DGV         P + P +V   E P    +  E+    W  P K   P ++ +    +Y  A+   + + V   W E    +          +  M  L        H  +V++       +   GRL+TAGDK+V+VW                                                     LE ++ +A A+R+TA +  ++ VNG++L C+SNG++ +W+L +  +NI +   +WEH   IND + S P     E     +  C  +YSVSDDR +KVWD + + CL ++ P    CGT++SVARS  HL+ G+SNG + VY L R C R +RH C + E   L FCLQ  LQHG   I  ++CGG     K+L++AS DG+ +VW       + HE +     H     ++C C + AH+F+A     + VW+L T+ LQ+V+
Sbjct:   96 KTPKWAEKNELKRCNCLDGVDNGDSRVYYPLNLPRFVTSLECPEGIRVRMEDPEFGWAEPQKVMNPAAEVLDFVFQYVGAKELAKVATVDRLWRERIDMQTH--------FIDMKQLANDYEHQVHSGRVESC------LEFNGRLYTAGDKRVKVW----------------------------------------------------NLETYECLAEAVRETAVINDIQVVNGALLVCASNGSIRQWSLTHNPKNIAYVAAYWEHRSWINDFIPSEP-----EPDDDGEMFCRFLYSVSDDRTVKVWDANKKVCLFSMDPPNRTCGTMRSVARSARHLYVGSSNGVIYVYPLKRECDREDRHGCSISEHGALPFCLQTELQHGKGIILQLECGGYRRQVKHLYSASTDGTFRVWSLPGKSGYEHECLRVIDAHAPGGALSCFCTTWAHLFTAGQDKVIRVWNLHTMELQKVL 498          
BLAST of mRNA_S-ischiensis_contig73.18686.1 vs. uniprot
Match: A0A7S2RZP4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZP4_9STRA)

HSP 1 Score: 154 bits (390), Expect = 4.720e-36
Identity = 82/230 (35.65%), Postives = 123/230 (53.48%), Query Frame = 0
Query:  490 RDTAPLTLVKRVNGSMLCCSSNGNMSEWALANKLQNIVFRGQFWEHNRRINDVVFSLPSAGYCEAHGTPDHVCLMYSVSDDRLLKVWDLSSRRCLHTIRPRIADCGTLQSVARSDFHLFAGTSNGRVVVYGLGRVCRRAERHECDLHEQPLWFCLQETLQHGSE----AITCMQCGGLGGAFKYLFTASADGSIKVWQTEPHHSFNHEVVTTFKQHERKITCLCLSHAHI 715
            +DTAP+T+   ++  +   S+NG + +W++  K+ NI FRG  W HN+ +ND+           AH       ++++V DDR+ +VWDL+  RC+H I P   + GTL+S   SD   F G+SNGR+ VY   R CRR +RH C L   P+ +C Q TL HG       +T ++ GG      YLFT  +DG I+++   P +     +V     H   +T L  S AH+
Sbjct:  282 KDTAPITVAMEIDAFLFLASANGALRKWSMPFKVTNIDFRGSMWLHNKVVNDM-----------AHWKKGQESVLFTVCDDRICRVWDLTVNRCIHVIDPIDRESGTLRSACCSDQFFFIGSSNGRIDVYLTERKCRRQDRHICHLPSGPVPYCHQTTLSHGDPEVRPVVTALEVGGFHHREDYLFTGGSDGRIQIFSL-PDYGLEFPLVHILDLHTAPVTSLRCSWAHL 499          
BLAST of mRNA_S-ischiensis_contig73.18686.1 vs. uniprot
Match: A0A7S2H458_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H458_9STRA)

HSP 1 Score: 108 bits (271), Expect = 8.100e-23
Identity = 76/274 (27.74%), Postives = 118/274 (43.07%), Query Frame = 0
Query:  377 PTYTGMHSLVLQSALDAHDNKVDAIFFHQPTVVHQGRLFTAGDKKVRVWEFTGVQEPEDADPDTANQSQDAQDTSQTTGSSTEAEAMAAEGEYSQCEPTLQQLEAWKAVAVAMRDTAPLTLVKRVNGSMLCCSSNGNMSEWALANKLQNIVFRGQFWEHNRRINDVVFSLPSAGYCEAHGTPDHVCLMYSVSDDRLLKVWDLSSRRCLHTIRPRIADCGTLQSVARSDFHLFAGTSNGRVVVYGLGRV-CRRAERHECDLHEQPLWFCLQETLQ 649
            P Y  M    ++    AH+ +V  +      V ++GR +T GDK V+VW+                                   A A   E+ + E           +   + D  P+T  + ++G++L  SSNG +  W + + ++ +  R   WEHN  ++D            +H        +++ SDDR +K WDL   RC HT+ P      T++SVA SD  LF G S G + VY      C R +RHEC +  +P  +CLQ+TLQ
Sbjct:   27 PHYDDMKRFGVEMKFTAHEKRVKGV------VSYRGRCYTGGDKCVKVWKLQ--------------------------------RASAESEEFDRVE-----------LIHTVHDLCPVTFCQEIDGNLLVGSSNGAVRMWTMPHSIKKMNQRAVMWEHNALVHDA-----------SHWQRGKFSTLFTASDDRTIKAWDLHQVRCEHTLEPLDRRGATMRSVAVSDSFLFVGHSRGVIYVYLTDTSSCLREDRHECYISPRP--YCLQKTLQ 238          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LMJ5_ECTSI2.640e-6237.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U4D539_9STRA7.390e-6031.01Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2RZP4_9STRA4.720e-3635.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2H458_9STRA8.100e-2327.74Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 384..426
e-value: 24.0
score: 8.3
coord: 691..728
e-value: 0.0011
score: 28.3
coord: 640..683
e-value: 2.1
score: 15.0
coord: 525..577
e-value: 4.3
score: 13.0
coord: 580..620
e-value: 130.0
score: 3.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 644..682
e-value: 0.22
score: 12.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 563..586
score: 8.57
NoneNo IPR availableGENE3D2.20.28.140coord: 49..84
e-value: 1.3E-5
score: 26.4
NoneNo IPR availablePANTHERPTHR44489FAMILY NOT NAMEDcoord: 640..752
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 637..783
e-value: 1.3E-14
score: 55.6
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 564..578
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 57..76
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 53..82
score: 8.637
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 669..737
score: 8.624
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 387..741
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 54..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig73contigS-ischiensis_contig73:587695..605302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig73.18686.1mRNA_S-ischiensis_contig73.18686.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig73 585600..605524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig73.18686.1 ID=prot_S-ischiensis_contig73.18686.1|Name=mRNA_S-ischiensis_contig73.18686.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=786bp
MRAASLPWRIREHREASPVTEGSKLAPGRAETGRPRWVEEVTQRTRPQQE
GSMGGGWKCSQCKTVNDSTDQVCEKCFAPRTRSGYSDLPRETCKTCTHRH
STEQPCDFWITDAKAQARRRKHWAKYRQRGLLDGMPGPQGAGGSSDSIGS
DSKSGSDTASGSDENDGSGEDKSGDGGDDDGSGDGDDDDDDDDDDDDDED
DDEDGEENDDGDDEDDDDDESNGSESGSGSSPTGKNPEGAPQGPTDAKGL
LKGLGAKAAGMAKKGAQLMQQMAGDRIPPHKTEWWAKEACLKRCNCGDGV
PADNPAYVPVPERPSTAPIEENREQWNTPTKFPPTSDAIRQFIEYSDART
AGQYSRVCVGWHEECHAEGEEGRPFHPTYTGMHSLVLQSALDAHDNKVDA
IFFHQPTVVHQGRLFTAGDKKVRVWEFTGVQEPEDADPDTANQSQDAQDT
SQTTGSSTEAEAMAAEGEYSQCEPTLQQLEAWKAVAVAMRDTAPLTLVKR
VNGSMLCCSSNGNMSEWALANKLQNIVFRGQFWEHNRRINDVVFSLPSAG
YCEAHGTPDHVCLMYSVSDDRLLKVWDLSSRRCLHTIRPRIADCGTLQSV
ARSDFHLFAGTSNGRVVVYGLGRVCRRAERHECDLHEQPLWFCLQETLQH
GSEAITCMQCGGLGGAFKYLFTASADGSIKVWQTEPHHSFNHEVVTTFKQ
HERKITCLCLSHAHIFSACDGGRLCVWSLGTLTLQRVVQQHWRIKSLAVH
YDPVEPGDPRASGDGCLMLGLATGRVLVFPITAPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR001876Znf_RanBP2
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
IPR036443Znf_RanBP2_sf