prot_S-ischiensis_contig7.18360.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig7.18360.1
Unique Nameprot_S-ischiensis_contig7.18360.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length284
Homology
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: D7FNC2_ECTSI (C3H1-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNC2_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 1.250e-23
Identity = 58/106 (54.72%), Postives = 74/106 (69.81%), Query Frame = 0
Query:   14 EAELQGEMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSK--KPCRHLL-NGDCRRRDCVFSHDFGSTTCRYWLMGTCT-SGYECAFLHDL 115
            E +L+ E++ VLA  F++C PE LQVALA   W+LD A+ A+ +AL QI+   S   KPCRHLL +G+CRR DC FSHDF +T CRYWL G C  S  +C F+HDL
Sbjct:  136 EVQLEAEVLEVLAEGFSDCSPESLQVALAKSDWNLDRASAAVLLAL-QIACDASLAVKPCRHLLLDGECRRSDCTFSHDFATTPCRYWLQGCCVNSSDDCYFMHDL 240          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A6H5JKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG2_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 5.010e-15
Identity = 45/104 (43.27%), Postives = 57/104 (54.81%), Query Frame = 0
Query:   14 EAELQGEMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLL-NGDCRRRDCVFSHDFGSTTCRYWLMGTCT-SGYECAFLHDL 115
            E +L+ E++ VLA  F++C PE LQ A                          + KPCRHLL +G+CRR DC FSHDF +T CRYWL G C  S  +C F+HDL
Sbjct:  136 EVQLEAEVLEVLAEGFSDCSPESLQTA---------------------CDASLAVKPCRHLLLDGECRRSDCAFSHDFATTPCRYWLQGCCVNSSDDCYFMHDL 218          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: M4B571_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B571_HYAAE)

HSP 1 Score: 76.3 bits (186), Expect = 6.460e-12
Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 0
Query:   20 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 114
            E++  L  +F +  P+ +   L   G D+D A   L + + + S   S+  CRH + GDCRR DC+F HD  S TCR+WL GTC     C F HD
Sbjct:  205 ELVSHLQLKFQDIDPDRMCELLRLVGLDVDKAHAVLKVTIERESVGPSQV-CRHYMQGDCRRADCMFLHDTHSITCRFWLRGTCLQAEHCVFAHD 298          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A225VSJ6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VSJ6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 8.740e-11
Identity = 37/95 (38.95%), Postives = 50/95 (52.63%), Query Frame = 0
Query:   20 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 114
            E++  L  +F++  P  L   L   G D+D A   L + + + S    +  CRH L G+CRR DC+F HD    TCR+WL GTC     C F HD
Sbjct:  187 ELVSHLQLKFSDIDPNRLCDLLRLVGLDVDKAHAVLKITIERESIGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQAEHCVFAHD 280          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A3M6VB56_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB56_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.220e-10
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 0
Query:   20 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 114
            E++  L  +F +  P  L   L   G D+D A   L   + + S    +  CRH L G+CRR DC+F HD    TCR+WL GTC     C F HD
Sbjct:  200 ELVNHLQLKFPDIDPNRLCDLLRLLGLDVDRAHAVLKATIERESVGPGQV-CRHYLQGECRRADCMFLHDTNKITCRFWLRGTCLQAQHCVFAHD 293          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: H3GJW5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJW5_PHYRM)

HSP 1 Score: 71.2 bits (173), Expect = 2.990e-10
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 0
Query:   20 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 114
            E++  L  +F +  P  L   L   G D+D A   L   + + S    +  CRH L G+CRR DC+F HD    TCR+WL GTC     C F HD
Sbjct:  194 ELVSHLQLKFPDIDPSRLCDLLRLVGLDVDKAHAVLKATIERESVGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQADHCVFAHD 287          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: G4ZFB7_PHYSP (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=G4ZFB7_PHYSP)

HSP 1 Score: 71.2 bits (173), Expect = 3.000e-10
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 0
Query:   20 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 114
            E++  L  +F +  P  L   L   G D+D A   L   + + S    +  CRH L G+CRR DC+F HD    TCR+WL GTC     C F HD
Sbjct:  202 ELVSHLQLKFPDIDPSRLCDLLRLVGLDVDKAHAVLKATIERESIGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQAEHCVFAHD 295          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A3R7J5L3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J5L3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.060e-10
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 0
Query:   20 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 114
            E++  L  +F +  P  L   L   G D+D A   L   + + S    +  CRH L G+CRR DC+F HD    TCR+WL GTC     C F HD
Sbjct:  226 ELVSHLQLKFPDIDPNRLCDLLRLVGLDVDKAHAVLKATIERESIGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQAEHCVFAHD 319          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A484DXY4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXY4_BRELC)

HSP 1 Score: 70.5 bits (171), Expect = 5.360e-10
Identity = 36/95 (37.89%), Postives = 49/95 (51.58%), Query Frame = 0
Query:   20 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 114
            E++  L  +F +  P  L   L   G D+D A   +   L + S    +  CRH L G+CRR DC+F HD    TCR+WL G+C    +C F HD
Sbjct:  192 ELVSHLQLKFPDMDPHRLCDLLRLVGLDVDKAHAVIKTTLERESIGTGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGSCLQAEDCVFAHD 285          
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A2P4XU03_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XU03_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.520e-10
Identity = 36/95 (37.89%), Postives = 47/95 (49.47%), Query Frame = 0
Query:   20 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 114
            +++  L  +F +  P  L   L   G D+D A   L   + Q S    +  CRH L G+CRR DC+F HD    TCR+WL G C     C F HD
Sbjct:    6 QLVSHLELEFPDIDPNRLCDLLRLVGLDVDKAHAVLKATIEQESIGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGACLQAEHCVFAHD 99          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FNC2_ECTSI1.250e-2354.72C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JKG2_9PHAE5.010e-1543.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
M4B571_HYAAE6.460e-1240.00Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A225VSJ6_9STRA8.740e-1138.95Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A3M6VB56_9STRA2.220e-1038.95Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
H3GJW5_PHYRM2.990e-1038.95Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
G4ZFB7_PHYSP3.000e-1038.95Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
A0A3R7J5L3_9STRA3.060e-1038.95Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A484DXY4_BRELC5.360e-1037.89Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A2P4XU03_9STRA5.520e-1037.89Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 91..115
e-value: 0.53
score: 18.5
coord: 66..90
e-value: 1.6
score: 14.7
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 89..116
score: 12.981
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 65..88
score: 8.521
NoneNo IPR availableGENE3D4.10.1000.10coord: 59..134
e-value: 2.8E-11
score: 45.3
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 91..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig7contigS-ischiensis_contig7:3855843..3864348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig7.18360.1mRNA_S-ischiensis_contig7.18360.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig7 3855843..3864350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig7.18360.1 ID=prot_S-ischiensis_contig7.18360.1|Name=mRNA_S-ischiensis_contig7.18360.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=284bp
GVVVESEEALAQLEAELQGEMMGVLARQFTECGPECLQVALATGGWDLDV
AARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLM
GTCTSGYECAFLHDLPPSAAAAAEDPASSSAEGGGGGGPDGKTSLDLSFW
GAFPPLGRAATDPDEDWAASMVLDGPASAEQTPFSSSANGGRSRSSSANG
GRRSRSRTPPPPPGRAREEDTTATALTGTLGALSLEDQDFPSLSPPPPRR
RGTGATSQVPPVAAAAAAAAAAAVDKHRTGSAQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf