mRNA_S-ischiensis_contig7.18360.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: D7FNC2_ECTSI (C3H1-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNC2_ECTSI) HSP 1 Score: 110 bits (275), Expect = 1.250e-23 Identity = 58/106 (54.72%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 40 EAELQGEMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSK--KPCRHLL-NGDCRRRDCVFSHDFGSTTCRYWLMGTCT-SGYECAFLHDL 345
E +L+ E++ VLA F++C PE LQVALA W+LD A+ A+ +AL QI+ S KPCRHLL +G+CRR DC FSHDF +T CRYWL G C S +C F+HDL
Sbjct: 136 EVQLEAEVLEVLAEGFSDCSPESLQVALAKSDWNLDRASAAVLLAL-QIACDASLAVKPCRHLLLDGECRRSDCTFSHDFATTPCRYWLQGCCVNSSDDCYFMHDL 240
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A6H5JKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG2_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 5.010e-15 Identity = 45/104 (43.27%), Postives = 57/104 (54.81%), Query Frame = 1
Query: 40 EAELQGEMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLL-NGDCRRRDCVFSHDFGSTTCRYWLMGTCT-SGYECAFLHDL 345
E +L+ E++ VLA F++C PE LQ A + KPCRHLL +G+CRR DC FSHDF +T CRYWL G C S +C F+HDL
Sbjct: 136 EVQLEAEVLEVLAEGFSDCSPESLQTA---------------------CDASLAVKPCRHLLLDGECRRSDCAFSHDFATTPCRYWLQGCCVNSSDDCYFMHDL 218
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: M4B571_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B571_HYAAE) HSP 1 Score: 76.3 bits (186), Expect = 6.460e-12 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 58 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 342
E++ L +F + P+ + L G D+D A L + + + S S+ CRH + GDCRR DC+F HD S TCR+WL GTC C F HD
Sbjct: 205 ELVSHLQLKFQDIDPDRMCELLRLVGLDVDKAHAVLKVTIERESVGPSQV-CRHYMQGDCRRADCMFLHDTHSITCRFWLRGTCLQAEHCVFAHD 298
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A225VSJ6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VSJ6_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 8.740e-11 Identity = 37/95 (38.95%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 58 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 342
E++ L +F++ P L L G D+D A L + + + S + CRH L G+CRR DC+F HD TCR+WL GTC C F HD
Sbjct: 187 ELVSHLQLKFSDIDPNRLCDLLRLVGLDVDKAHAVLKITIERESIGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQAEHCVFAHD 280
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A3M6VB56_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB56_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.220e-10 Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 1
Query: 58 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 342
E++ L +F + P L L G D+D A L + + S + CRH L G+CRR DC+F HD TCR+WL GTC C F HD
Sbjct: 200 ELVNHLQLKFPDIDPNRLCDLLRLLGLDVDRAHAVLKATIERESVGPGQV-CRHYLQGECRRADCMFLHDTNKITCRFWLRGTCLQAQHCVFAHD 293
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: H3GJW5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJW5_PHYRM) HSP 1 Score: 71.2 bits (173), Expect = 2.990e-10 Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 1
Query: 58 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 342
E++ L +F + P L L G D+D A L + + S + CRH L G+CRR DC+F HD TCR+WL GTC C F HD
Sbjct: 194 ELVSHLQLKFPDIDPSRLCDLLRLVGLDVDKAHAVLKATIERESVGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQADHCVFAHD 287
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: G4ZFB7_PHYSP (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=G4ZFB7_PHYSP) HSP 1 Score: 71.2 bits (173), Expect = 3.000e-10 Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 1
Query: 58 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 342
E++ L +F + P L L G D+D A L + + S + CRH L G+CRR DC+F HD TCR+WL GTC C F HD
Sbjct: 202 ELVSHLQLKFPDIDPSRLCDLLRLVGLDVDKAHAVLKATIERESIGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQAEHCVFAHD 295
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A3R7J5L3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J5L3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.060e-10 Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 1
Query: 58 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 342
E++ L +F + P L L G D+D A L + + S + CRH L G+CRR DC+F HD TCR+WL GTC C F HD
Sbjct: 226 ELVSHLQLKFPDIDPNRLCDLLRLVGLDVDKAHAVLKATIERESIGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQAEHCVFAHD 319
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A484DXY4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXY4_BRELC) HSP 1 Score: 70.5 bits (171), Expect = 5.360e-10 Identity = 36/95 (37.89%), Postives = 49/95 (51.58%), Query Frame = 1
Query: 58 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 342
E++ L +F + P L L G D+D A + L + S + CRH L G+CRR DC+F HD TCR+WL G+C +C F HD
Sbjct: 192 ELVSHLQLKFPDMDPHRLCDLLRLVGLDVDKAHAVIKTTLERESIGTGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGSCLQAEDCVFAHD 285
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Match: A0A2P4XU03_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XU03_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.520e-10 Identity = 36/95 (37.89%), Postives = 47/95 (49.47%), Query Frame = 1
Query: 58 EMMGVLARQFTECGPECLQVALATGGWDLDVAARALAMALRQISTQKSKKPCRHLLNGDCRRRDCVFSHDFGSTTCRYWLMGTCTSGYECAFLHD 342
+++ L +F + P L L G D+D A L + Q S + CRH L G+CRR DC+F HD TCR+WL G C C F HD
Sbjct: 6 QLVSHLELEFPDIDPNRLCDLLRLVGLDVDKAHAVLKATIEQESIGPGQV-CRHYLQGECRRADCMFLHDTDKITCRFWLRGACLQAEHCVFAHD 99 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig7.18360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig7.18360.1 >prot_S-ischiensis_contig7.18360.1 ID=prot_S-ischiensis_contig7.18360.1|Name=mRNA_S-ischiensis_contig7.18360.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=284bp GVVVESEEALAQLEAELQGEMMGVLARQFTECGPECLQVALATGGWDLDVback to top mRNA from alignment at S-ischiensis_contig7:3855843..3864350+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig7.18360.1 ID=mRNA_S-ischiensis_contig7.18360.1|Name=mRNA_S-ischiensis_contig7.18360.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8508bp|location=Sequence derived from alignment at S-ischiensis_contig7:3855843..3864350+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig7:3855843..3864350+ >mRNA_S-ischiensis_contig7.18360.1 ID=mRNA_S-ischiensis_contig7.18360.1|Name=mRNA_S-ischiensis_contig7.18360.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1704bp|location=Sequence derived from alignment at S-ischiensis_contig7:3855843..3864350+ (Schizocladia ischiensis KU_0333)back to top |