prot_S-ischiensis_contig15.3831.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig15.3831.1
Unique Nameprot_S-ischiensis_contig15.3831.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length72
Homology
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BLAST of mRNA_S-ischiensis_contig15.3831.1 vs. uniprot
Match: D7G4N4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N4_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.700e-11
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:   11 QLLREYEAAQQGAEPGSRCTVARAPHQIPFKMMDSNDPLRKKERDRLRSIQRLKKKK 67
            ++L+ Y+AA +  +  +RC VAR   QIP+KMMDSNDP RKK RDR RSI R++KKK
Sbjct:  483 KILQSYDAASRKLDINARCCVARTTQQIPYKMMDSNDPRRKKARDRQRSIDRIRKKK 539
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BLAST of mRNA_S-ischiensis_contig15.3831.1 vs. uniprot
Match: A0A835YHP0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHP0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.240e-7
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:   13 LREYEAAQQGAEPGSRCTVARAPHQIPFKMMDSNDPLRKKERDRLRSIQRLKK 65
            L  ++AAQ       RC +ARA   +P++ MDS+DPLRK+ERDR RS QRL+K
Sbjct:  291 LAAWQAAQARLPESERCCLARAASALPYRCMDSSDPLRKRERDRRRSKQRLQK 343
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig15.3831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4N4_ECTSI3.700e-1157.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHP0_9STRA4.240e-752.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig15contigS-ischiensis_contig15:2529161..2530081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig15.3831.1mRNA_S-ischiensis_contig15.3831.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig15 2529130..2530842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig15.3831.1 ID=prot_S-ischiensis_contig15.3831.1|Name=mRNA_S-ischiensis_contig15.3831.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=72bp
MYYCVPLLVLQLLREYEAAQQGAEPGSRCTVARAPHQIPFKMMDSNDPLR
KKERDRLRSIQRLKKKKRGGQ*
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