prot_S-ischiensis_contig15.3455.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig15.3455.1
Unique Nameprot_S-ischiensis_contig15.3455.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length88
Homology
BLAST of mRNA_S-ischiensis_contig15.3455.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 58.2 bits (139), Expect = 2.390e-9
Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    2 QAKYEEAMPLCQRALKISEEVLGPDHPTVAARLNSLASL 40
            Q KYEEA PL QRALKI E VLGPDHP+VA  LN+LA L
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_S-ischiensis_contig15.3455.1 vs. uniprot
Match: UPI0013D05A06 (tetratricopeptide repeat-containing protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D05A06)

HSP 1 Score: 58.2 bits (139), Expect = 4.080e-8
Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    2 QAKYEEAMPLCQRALKISEEVLGPDHPTVAARLNSLASL 40
            Q KYEEA PL QRALKI E VLGPDHP+VA  LN+LA L
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_S-ischiensis_contig15.3455.1 vs. uniprot
Match: A0A7S3JZ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZ32_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.370e-6
Identity = 27/43 (62.79%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    2 QAKYEEAMPLCQRALKISEEVLGPDHPTVAARLNSLASLLQLQ 44
            QAKY EA PL +RAL+I EE LGP+HP VA  L  LA LL  Q
Sbjct:    2 QAKYNEAKPLYERALRIHEEKLGPNHPDVAMTLYKLAGLLNEQ 44          
BLAST of mRNA_S-ischiensis_contig15.3455.1 vs. uniprot
Match: A0A512MFP3_9BACT (NACHT domain-containing protein n=1 Tax=Brevifollis gellanilyticus TaxID=748831 RepID=A0A512MFP3_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 1.010e-5
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    3 AKYEEAMPLCQRALKISEEVLGPDHPTVAARLNSLASLLQ 42
            A++ EA PL +RALKI E   GPDHPTVA RLN+LA +LQ
Sbjct:  456 AQHAEAEPLQRRALKIDEASQGPDHPTVAIRLNNLAQVLQ 495          
BLAST of mRNA_S-ischiensis_contig15.3455.1 vs. uniprot
Match: UPI000AACEA4F (CHAT domain-containing protein n=1 Tax=Moorena bouillonii TaxID=207920 RepID=UPI000AACEA4F)

HSP 1 Score: 50.1 bits (118), Expect = 4.890e-5
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    2 QAKYEEAMPLCQRALKISEEVLGPDHPTVAARLNSLASL 40
            Q KY EA+PL +R L+I ++VLGPDHP VAA LN L  L
Sbjct:   93 QRKYSEAIPLWERELEIRQQVLGPDHPDVAANLNYLGVL 131          
BLAST of mRNA_S-ischiensis_contig15.3455.1 vs. uniprot
Match: UPI0019409711 (FxSxx-COOH system tetratricopeptide repeat protein n=1 Tax=Actinoplanes nipponensis TaxID=135950 RepID=UPI0019409711)

HSP 1 Score: 49.7 bits (117), Expect = 6.580e-5
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    2 QAKYEEAMPLCQRALKISEEVLGPDHPTVAARLNSLASLL 41
            Q ++  A+PL QRAL I+E  +GPDHPTVA RLN+LA  L
Sbjct:  448 QGQHHIALPLQQRALTITETAVGPDHPTVAIRLNNLAQTL 487          
BLAST of mRNA_S-ischiensis_contig15.3455.1 vs. uniprot
Match: A0A0M1J674_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Achromatium sp. WMS1 TaxID=1604834 RepID=A0A0M1J674_9GAMM)

HSP 1 Score: 49.3 bits (116), Expect = 7.370e-5
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    2 QAKYEEAMPLCQRALKISEEVLGPDHPTVAARLNSLASL 40
            Q KY EA+PL Q+ L I+E+VLGP+HP+ A  LN+LA L
Sbjct:   67 QGKYAEAIPLAQQDLAITEQVLGPNHPSTATSLNNLALL 105          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig15.3455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
UPI0013D295282.390e-974.36tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
UPI0013D05A064.080e-874.36tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A7S3JZ32_9STRA2.370e-662.79Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A512MFP3_9BACT1.010e-565.00NACHT domain-containing protein n=1 Tax=Brevifolli... [more]
UPI000AACEA4F4.890e-561.54CHAT domain-containing protein n=1 Tax=Moorena bou... [more]
UPI00194097116.580e-560.00FxSxx-COOH system tetratricopeptide repeat protein... [more]
A0A0M1J674_9GAMM7.370e-558.97Uncharacterized protein (Fragment) n=1 Tax=Achroma... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 31..64
e-value: 0.0022
score: 27.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 31..64
score: 8.26
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..81
e-value: 5.2E-33
score: 116.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..79
NoneNo IPR availablePFAMPF13424TPR_12coord: 2..62
e-value: 2.0E-17
score: 63.3
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 2..79
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..79
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..64
score: 11.652

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig15contigS-ischiensis_contig15:3499..5081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig15.3455.1mRNA_S-ischiensis_contig15.3455.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig15 3499..5081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig15.3455.1 ID=prot_S-ischiensis_contig15.3455.1|Name=mRNA_S-ischiensis_contig15.3455.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=88bp
MQAKYEEAMPLCQRALKISEEVLGPDHPTVAARLNSLASLLQLQGKYDEA
EPLYRRSLEIDERVYGPDHPHVATDLNNLVVQPHIVI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom