prot_S-ischiensis_contig13.2957.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig13.2957.1
Unique Nameprot_S-ischiensis_contig13.2957.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length100
Homology
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BLAST of mRNA_S-ischiensis_contig13.2957.1 vs. uniprot
Match: A0A6H5JHC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC6_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.150e-20
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 0 
Query:    2 EGPIRVALSGLQPEDRAAAVSVVKALARSHRQARATLVDDSDPSAPFTHLVIPDAGRRTLRVLFALCAPPRGPRGALPAIVTPDWLYSSLDANAFLD 98
            +G +RVA SG+QP DR AA SVV++L+R+HR    + V  SD  A +THLVIPD  RRTL+VLFALCAP   P G  P +VT  WLY SL+   F+D
Sbjct: 1850 QGVVRVAFSGMQPGDRQAAASVVRSLSRTHRP-HGSGVCTSDAEA-YTHLVIPDVSRRTLKVLFALCAP-LSPNGRPPVVVTVAWLYESLEKGFFVD 1943
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BLAST of mRNA_S-ischiensis_contig13.2957.1 vs. uniprot
Match: D7G1G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G0_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.890e-19
Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = 0 
Query:    2 EGPIRVALSGLQPEDRAAAVSVVKALARSHRQARATLVDDSDPSAPFTHLVIPDAGRRTLRVLFALCAPPRGPRGALPAIVTPDWLYSSLDANAFLD 98
            +G +RV  SGLQP DR AA SVV++L+++HR    + V  SD  A +THLVIPD  RRTL+VLFALCAP   P G  P +VT  WLY SL+   F+D
Sbjct: 1600 QGVVRVVFSGLQPGDRQAAASVVRSLSKTHRP-HGSGVCMSDAEA-YTHLVIPDVSRRTLKVLFALCAP-LSPNGRPPVVVTVAWLYESLEKGFFVD 1693
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig13.2957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHC6_9PHAE2.150e-2055.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1G0_ECTSI1.890e-1954.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 2..100
e-value: 1.5E-9
score: 39.8
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 8..99
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 36..100
score: 8.861

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig13contigS-ischiensis_contig13:994963..997442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig13.2957.1mRNA_S-ischiensis_contig13.2957.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig13 994963..997442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig13.2957.1 ID=prot_S-ischiensis_contig13.2957.1|Name=mRNA_S-ischiensis_contig13.2957.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=100bp
AEGPIRVALSGLQPEDRAAAVSVVKALARSHRQARATLVDDSDPSAPFTH
LVIPDAGRRTLRVLFALCAPPRGPRGALPAIVTPDWLYSSLDANAFLDPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom