prot_S-ischiensis_contig122.2808.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig122.2808.1
Unique Name	prot_S-ischiensis_contig122.2808.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	151

Homology

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: A0A7S6UA19_9STRA (Cytochrome c oxidase subunit 1 n=5 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6UA19_9STRA)

HSP 1 Score: 300 bits (767), Expect = 5.950e-98
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 151
            GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT
Sbjct:  261 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 411

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: A0A4Q3DIG2_9RICK (COX1 domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DIG2_9RICK)

HSP 1 Score: 285 bits (728), Expect = 5.830e-95
Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 151
            GFGIISHVVSTFSKKP+FGYLGMVYAMLSIGVLGFIVWAHHMFTVG+DIDTRAYFTAATMIIAVPTGIK+FSWIAT+WGGSIE KTPMLFAIGF+FLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGA FA+FA FY+W GKI+
Sbjct:    6 GFGIISHVVSTFSKKPIFGYLGMVYAMLSIGVLGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKVFSWIATMWGGSIEFKTPMLFAIGFIFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAVFALFAAFYYWIGKIS 156

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: D6MQM8_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=28 Tax=Phaeophyceae TaxID=2870 RepID=D6MQM8_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 2.600e-94
Identity = 133/151 (88.08%), Postives = 146/151 (96.69%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 151
            GFGI+SH+++TFS+KPVFGYLGMVYAMLSIG+LGFIVWAHHMFTVG+DIDTRAYFTAATMIIAVPTGIKIFSWIAT+WGGSI LKTPMLF+IGFLFLFT+GGLTGV+LANSG+DIALHDTYYVVAHFHYVLSMGAAF MF  FYFW GK+T
Sbjct:   13 GFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFGAFYFWVGKMT 163

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: Q31705_ARATH (Cytochrome c oxidase subunit 1 (Fragment) n=9 Tax=Spermatophyta TaxID=58024 RepID=Q31705_ARATH)

HSP 1 Score: 278 bits (710), Expect = 5.450e-93
Identity = 131/150 (87.33%), Postives = 146/150 (97.33%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKI 150
            GFGIISH+VSTFS KPVFGYLGMVYAM+SIGVLGF+VWAHHMFTVG+D+DTRAYFTAATMIIAVPTGIKIFSWIAT+WGGSI+ KTPMLFA+GF+FLFT+GGLTG++LANSG+DIALHDTYYVVAHFHYVLSMGA FA+FAGFY+W GKI
Sbjct:   47 GFGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKI 196

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: D6MQN4_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=15 Tax=Phaeophyceae TaxID=2870 RepID=D6MQN4_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.020e-92
Identity = 136/151 (90.07%), Postives = 147/151 (97.35%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 151
            GFGI+SH++STFS+KPVFGYLGMVYAMLSIG+LGFIVWAHHMFTVG+DIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSI LKTPMLF+IGFLFLFT+GGLTGV+LANSG+DIALHDTYYVVAHFHYVLSMGAAF MFA FYFW GK+T
Sbjct:  235 GFGIVSHILSTFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKMT 385

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: A0A160YZN7_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A160YZN7_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.020e-92
Identity = 136/151 (90.07%), Postives = 147/151 (97.35%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 151
            GFGI+SH++STFS+KPVFGYLGMVYAMLSIG+LGFIVWAHHMFTVG+DIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSI LKTPMLF+IGFLFLFT+GGLTGV+LANSG+DIALHDTYYVVAHFHYVLSMGAAF MFA FYFW GK+T
Sbjct:  235 GFGIVSHILSTFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKMT 385

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: G8Z9D7_9FABA (Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=Mesangiospermae TaxID=1437183 RepID=G8Z9D7_9FABA)

HSP 1 Score: 278 bits (710), Expect = 1.070e-92
Identity = 131/150 (87.33%), Postives = 146/150 (97.33%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKI 150
            GFGIISH+VSTFS KPVFGYLGMVYAM+SIGVLGF+VWAHHMFTVG+D+DTRAYFTAATMIIAVPTGIKIFSWIAT+WGGSI+ KTPMLFA+GF+FLFT+GGLTG++LANSG+DIALHDTYYVVAHFHYVLSMGA FA+FAGFY+W GKI
Sbjct:    7 GFGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKI 156

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: A0A650AKK5_9CHLO (Cytochrome c oxidase subunit 1 n=1 Tax=prasinophyte sp. MBIC10622 TaxID=156113 RepID=A0A650AKK5_9CHLO)

HSP 1 Score: 287 bits (734), Expect = 1.070e-92
Identity = 138/151 (91.39%), Postives = 149/151 (98.68%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 151
            GFGIISH+VSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHM+TVG+D+DTRAYFTAATMIIAVPTGIKIFSWIAT+WGGSIELKTPMLFA+GF+FLFT+GGLTGV+LANSGIDIALHDTYYVVAHFHYVLSMGA FA+FAGFY+W GKIT
Sbjct:  254 GFGIISHIVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIELKTPMLFAVGFIFLFTLGGLTGVVLANSGIDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWIGKIT 404

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BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: A0A0U4ZTN0_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U4ZTN0_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.370e-92
Identity = 136/151 (90.07%), Postives = 147/151 (97.35%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 151
            GFGI+SH++STF++KPVFGYLGMVYAMLSIG+LGFIVWAHHMFTVG+DIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSI LKTPMLFAIGFLFLFT+GGLTGV+LANSG+DIALHDTYYVVAHFHYVLSMGAAF MFA FYFW GK+T
Sbjct:  173 GFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWIGKMT 323

[Close]

BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Match: D6MQN3_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Ecklonia radiata TaxID=309355 RepID=D6MQN3_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.440e-92
Identity = 136/151 (90.07%), Postives = 147/151 (97.35%), Query Frame = 0

Query:    1 GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTVGGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKIT 151
            GFGIISH++STFS+KPVFGYLGMVYAMLSIG+LGFIVWAHHMFTVG+DIDTRAYFTAATMIIAVPTGIKIFSW+ATLWGGSI LKTPMLF+IGFLFLFT+GGLTGV+LANSG+DIALHDTYYVVAHFHYVLSMGAAF MFA FYFW GK+T
Sbjct:  235 GFGIISHILSTFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWVATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSGVDIALHDTYYVVAHFHYVLSMGAAFTMFAAFYFWVGKMT 385

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig122.2808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S6UA19_9STRA	5.950e-98	100.00	Cytochrome c oxidase subunit 1 n=5 Tax=Stramenopil...	[more]
A0A4Q3DIG2_9RICK	5.830e-95	92.05	COX1 domain-containing protein n=1 Tax=Rickettsiac...	[more]
D6MQM8_9PHAE	2.600e-94	88.08	Cytochrome c oxidase subunit 1 (Fragment) n=28 Tax...	[more]
Q31705_ARATH	5.450e-93	87.33	Cytochrome c oxidase subunit 1 (Fragment) n=9 Tax=...	[more]
D6MQN4_9PHAE	1.020e-92	90.07	Cytochrome c oxidase subunit 1 (Fragment) n=15 Tax...	[more]
A0A160YZN7_9PHAE	1.020e-92	90.07	Cytochrome c oxidase subunit 1 (Fragment) n=2 Tax=...	[more]
G8Z9D7_9FABA	1.070e-92	87.33	Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=...	[more]
A0A650AKK5_9CHLO	1.070e-92	91.39	Cytochrome c oxidase subunit 1 n=1 Tax=prasinophyt...	[more]
A0A0U4ZTN0_9PHAE	1.370e-92	90.07	Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=...	[more]
D6MQN3_9PHAE	1.440e-92	90.07	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 118..137 score: 87.74 coord: 90..108 score: 69.89 coord: 55..76 score: 80.78 coord: 31..46 score: 84.53
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 2..151 e-value: 8.9E-55 score: 186.3
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..151
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..151 e-value: 3.6E-74 score: 251.9
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 1..151
None	No IPR available	PANTHER	PTHR10422:SF18	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..151
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..109
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 148..151
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 42..52
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 17..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 77..87
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 110..120
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..16
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..76
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 121..147
None	No IPR available	TMHMM	TMhelix		coord: 17..39
None	No IPR available	TMHMM	TMhelix		coord: 125..147
None	No IPR available	TMHMM	TMhelix		coord: 54..76
None	No IPR available	TMHMM	TMhelix		coord: 88..110
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..151 score: 42.91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig122	contig	S-ischiensis_contig122:3398..4853 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig122.2808.1	mRNA_S-ischiensis_contig122.2808.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig122 3398..4853 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig122.2808.1 ID=prot_S-ischiensis_contig122.2808.1|Name=mRNA_S-ischiensis_contig122.2808.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=151bp
GFGIISHVVSTFSKKPVFGYLGMVYAMLSIGVLGFIVWAHHMFTVGMDID
TRAYFTAATMIIAVPTGIKIFSWIATLWGGSIELKTPMLFAIGFLFLFTV
GGLTGVILANSGIDIALHDTYYVVAHFHYVLSMGAAFAMFAGFYFWFGKI
T

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR036927	Cyt_c_oxase-like_su1_sf
IPR023616	Cyt_c_oxase-like_su1_dom