prot_S-ischiensis_contig12.2789.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig12.2789.1
Unique Nameprot_S-ischiensis_contig12.2789.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length573
Homology
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BLAST of mRNA_S-ischiensis_contig12.2789.1 vs. uniprot
Match: D7FV95_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV95_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.010e-39
Identity = 103/300 (34.33%), Postives = 163/300 (54.33%), Query Frame = 0 
Query:  231 RDALERLWESGGEDEDAESPVPRDSEDAATEAVGAVRSALLEGKRGMIVDIDLVEFDDRDEKYDEDCLIYFVAELAKGLS-FAGNVKMLFKNTRLASAANSWVQLREMQRGPQGMSALRKLGFGSFFPDDDGTAFQYRSMDSYEHAADAVESCIDDDDAVLVVVGPRIIGEMLVTRRVVDLAKGRPVLVVNPRMRQMPAEMIKFSTVYTIFPIQVWHAKRNPKVKVD---LLRLDRNLKHVTSEMDQLLPRVVSKRVFPDPWKLYVDADGRGLKEVQTYDRKPTASTVCRAAQRVIDKVQ 526
            R AL  L E  G +   E+P P  S+  A EA  A + ALL GKRG+I+D+++ + DD   ++DE+  I F  +++K L+  +G VK+L +   LA  A   +Q    +   +G+   R + F SF   +       +SM  +           ++++ V ++V PR + ++ V R ++ +AKGRPV+++ PRM  MP E   F TVY +    V     NPK ++    L RL +N + + SE+ Q++PRV+  R FP  +KLY+D DG+G +  +TYD KP  + V   AQ  I +VQ
Sbjct:   53 RQALPEL-EGEGPETKRENPFPTSSDRGALEASSASQQALLAGKRGLIIDVEVRQMDDTHAEFDEEMQIDFATDISKALATVSGRVKVLLRGIHLAEKATEMLQKANTKGEEEGIEPRRDISFCSFQMANTDDEDDEKSMRDFASTL----GLANEEERVFLMVCPRRLVDVTVLREIILVAKGRPVVLITPRMPYMPVETDGFETVYQLKQYNVQPVPTNPKKRIKNVRLTRLGQNQQTIYSELGQVIPRVLVTRAFPGDFKLYLDIDGKGFQLEKTYDAKPQPAVVSFTAQNKIREVQ 347
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV95_ECTSI2.010e-3934.33DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 542..562
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..572
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.681
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 252..513
e-value: 8.3E-16
score: 58.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig12contigS-ischiensis_contig12:3326605..3337003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig12.2789.1mRNA_S-ischiensis_contig12.2789.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig12 3326372..3337008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig12.2789.1 ID=prot_S-ischiensis_contig12.2789.1|Name=mRNA_S-ischiensis_contig12.2789.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=573bp
MRAIVLIALTTCVAAAGRQWNSCFAHHPGRWTSHPRISNAENRVLSRESP
WCSRPQRRTARWATQLRMSDEGTEEDDDIGIPGMSDKQALDAARAALERS
FQLSATTAAASETENDNSLVGEDEGLGQPSTSSDRRAVLEAGVAGTEGNA
PPGDDSGAAEGGDQVGERSADSGVAGRPEMAGPTVGGMDDFVMRPGGLDR
QQALAGAGKAQGGDGAEQVAPAKFTAGAGARDALERLWESGGEDEDAESP
VPRDSEDAATEAVGAVRSALLEGKRGMIVDIDLVEFDDRDEKYDEDCLIY
FVAELAKGLSFAGNVKMLFKNTRLASAANSWVQLREMQRGPQGMSALRKL
GFGSFFPDDDGTAFQYRSMDSYEHAADAVESCIDDDDAVLVVVGPRIIGE
MLVTRRVVDLAKGRPVLVVNPRMRQMPAEMIKFSTVYTIFPIQVWHAKRN
PKVKVDLLRLDRNLKHVTSEMDQLLPRVVSKRVFPDPWKLYVDADGRGLK
EVQTYDRKPTASTVCRAAQRVIDKVQTVVRREKLKTKWDEARRQQEALMA
AAEEDEEDWEEDWEEDGEMGGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995