prot_S-ischiensis_contig12.2588.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig12.2588.1
Unique Nameprot_S-ischiensis_contig12.2588.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length256
Homology
BLAST of mRNA_S-ischiensis_contig12.2588.1 vs. uniprot
Match: D7G573_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G573_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 3.320e-17
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    1 MWDELSRDGKLAYLGVEGQARVKRAFGALVAYAALREHPLHRSDTSHQRAFEEMDLDNDGEVTFDEFVRWY 71
            MW  LSR  +L YLG EG+A+VK+A   L AY+ALREHPL     + Q+AF EMD ++DGEV+FDEFVRWY
Sbjct:  135 MWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNSDGEVSFDEFVRWY 205          
BLAST of mRNA_S-ischiensis_contig12.2588.1 vs. uniprot
Match: A0A6H5KQY7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY7_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.110e-16
Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 MWDELSRDGKLAYLGVEGQARVKRAFGALVAYAALREHPLHRSDTSHQRAFEEMDLDNDGEVTFDEFVRWY 71
            MW  LSR  +L YLG EG+A+VK+A   L AY+ALREHPL     + Q+AF EMD + DGEV+FDEFVRWY
Sbjct:  208 MWATLSRGHQLEYLGNEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNRDGEVSFDEFVRWY 278          
BLAST of mRNA_S-ischiensis_contig12.2588.1 vs. uniprot
Match: A0A835YJV9_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.860e-16
Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 MWDELSRDGKLAYLGVEGQARVKRAFGALVAYAALREHPLHRSDTSHQRAFEEMDLDNDGEVTFDEFVRWYD 72
            MW EL + G L YLG EGQARVKRA   L A AALREHP      S ++ F EMD D++GEVTF+EFVRWY+
Sbjct:  119 MWRELRKGGALEYLGSEGQARVKRAMIVLAAMAALREHPRRDGVLSPKKIFAEMDFDSNGEVTFEEFVRWYE 190          
BLAST of mRNA_S-ischiensis_contig12.2588.1 vs. uniprot
Match: A0A7S4DFJ0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFJ0_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 1.340e-10
Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 MWDELSRDGKLAYLGVEGQARVKRAFGALVAYAALREHPLHRSDTSHQ--RAFEEMDLDNDGEVTFDEFVRWY 71
            MW+EL+ +G+L YL    QA +K+A   + A+++L EHP +   TS    +A++E D + DG++TF+EF RWY
Sbjct:  124 MWEELTSEGELDYLSEAEQALIKKALAVITAFSSLNEHPAYTYGTSRNPFQAYQEADANGDGDLTFEEFDRWY 196          
BLAST of mRNA_S-ischiensis_contig12.2588.1 vs. uniprot
Match: A0A4D9D784_9STRA (EF-hand domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D784_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 8.940e-6
Identity = 27/79 (34.18%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    1 MWDELSRDGKLAYLGVEGQARVKRAFGALVAYAALREHPLHRSDT-SHQRAFEEMDLDNDGEVTFDEFVRWYDQTFPRQ 78
            +W E+ R  ++AYL  E + RVK+    L  +  L +HP    +T S +  F++ D++ DG+++F+EF+RWY  ++  Q
Sbjct:  177 VWYEIQRGDRMAYLRAEERERVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTASYDDQ 255          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G573_ECTSI3.320e-1760.56GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KQY7_9PHAE1.110e-1660.56EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YJV9_9STRA3.860e-1661.11EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S4DFJ0_HETAK1.340e-1042.47Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D784_9STRA8.940e-634.18EF-hand domain-containing protein n=2 Tax=Monodops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 46..74
e-value: 0.0027
score: 26.9
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 49..70
e-value: 1.9E-6
score: 27.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 42..77
score: 11.445
NoneNo IPR availableGENE3D1.10.238.10coord: 20..79
e-value: 1.8E-6
score: 29.6
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 55..67
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 34..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig12contigS-ischiensis_contig12:1036074..1038045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig12.2588.1mRNA_S-ischiensis_contig12.2588.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig12 1036074..1038051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig12.2588.1 ID=prot_S-ischiensis_contig12.2588.1|Name=mRNA_S-ischiensis_contig12.2588.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=256bp
MWDELSRDGKLAYLGVEGQARVKRAFGALVAYAALREHPLHRSDTSHQRA
FEEMDLDNDGEVTFDEFVRWYDQTFPRQHRGGGGGSALVRPLHHGKPSSV
VGQQRPPHGEQQPAPRTPTTVAAAAAAEEEHGIKGPASVEVDSFTAGSYG
SETAAFSPAGAAGTAGLVPPGGSWPVILTPDAIIPPGSGTRAGPVGTGPV
GTGPAGTGHGGGRQQQPQQQLPRRRPMTPEEQEELRERWLAGGHVTAISL
VDGGAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair