prot_S-ischiensis_contig116.2477.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig116.2477.1
Unique Name	prot_S-ischiensis_contig116.2477.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	167

Homology

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A6H5KVS5_9PHAE (GUN4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS5_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 3.740e-98
Identity = 134/157 (85.35%), Postives = 144/157 (91.72%), Query Frame = 0

Query:    2 TLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETEWQ 158
            TLPS+  IDYVPLATMLATGDLKGADQFTRDALIKAAG GSQKR FVYWT+VKNIP TDL+T+ENLWL YS GKFGYSVQ+D WRK KGDFENFCRRIGW T DAEVERKLRWFGANEFIYDVD+APRGHLPLTSALRGTTL+ +L+ HPVWETEW+
Sbjct:   99 TLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWE 255

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A836C7C7_9STRA (GUN4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C7_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.820e-95
Identity = 129/158 (81.65%), Postives = 141/158 (89.24%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETEWQAE 160
            L SDA IDYVPLATMLATGD KGADQFTRDALI+AAGEGSQKRGFVYWTDVKNIP  DL+TIE LWLKYSGGKFGYSVQ + W++ KGDFENFCR IGWNTK  E+ERKLRWFGANEFIYD ++AP+GHLPLTSALRGT L+ +LL+HPVWETEW  E
Sbjct:   68 LSSDAGIDYVPLATMLATGDFKGADQFTRDALIRAAGEGSQKRGFVYWTDVKNIPNKDLATIEKLWLKYSGGKFGYSVQAEVWKRKKGDFENFCRTIGWNTKSEEIERKLRWFGANEFIYDAERAPKGHLPLTSALRGTQLLKELLNHPVWETEWNKE 225

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7S2R3S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3S6_9STRA)

HSP 1 Score: 245 bits (626), Expect = 7.570e-80
Identity = 115/159 (72.33%), Postives = 131/159 (82.39%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 160
            LPSD  +DYVPLATMLATG L  ADQFTRDALIK  G   + R FVYWT+VK IP TDL+TIE LW K+SGGKFGYSVQ+ +WR++K DFE FCR+IGW TKD +VERK RWFGA+EFIYDV KAP GHLPLTSALRGT+LI QLL+HPVWE + W+ E
Sbjct:   81 LPSDMGMDYVPLATMLATGQLAEADQFTRDALIKLCGATEKGRNFVYWTEVKLIPSTDLATIERLWNKFSGGKFGYSVQKKKWRQSKNDFEVFCRKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKQLLTHPVWENDDWKIE 239

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7S2MK00_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MK00_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.400e-78
Identity = 114/159 (71.70%), Postives = 132/159 (83.02%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 160
            LPSD  +DYVPLATMLATG L  ADQFTRDALI  AG   + R FVY+T+VKNIP TDL+TIE LW K+SGGKFGYSVQ+ +W+++KGDF+ FCR+IGW TKD EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L  +LLSHPVWE + W+ E
Sbjct:   72 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKEKGRDFVYFTEVKNIPSTDLATIERLWNKFSGGKFGYSVQKRKWKQSKGDFDLFCRKIGWLTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLCRELLSHPVWENDDWKKE 230

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: B8C9C4_THAPS (GUN4 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9C4_THAPS)

HSP 1 Score: 238 bits (606), Expect = 4.340e-78
Identity = 109/151 (72.19%), Postives = 127/151 (84.11%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVW 153
            LPSD  +DYVPLATMLATG L  ADQFTRDALI  AG  ++ R FVY+T+VKNIP TDL+TIE LW K+SGGKFGYSVQ+  W+K+KGDFE +C +IGW TKD E+ERK RWFGA+EF YDV KAP+GHLPLTSALRGT+LI +LL+HPVW
Sbjct:    1 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWTKFSGGKFGYSVQKQIWKKSKGDFEVWCNKIGWTTKDGEIERKKRWFGASEFTYDVKKAPKGHLPLTSALRGTSLIKELLNHPVW 151

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A6S8ZHG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZHG1_9STRA)

HSP 1 Score: 240 bits (612), Expect = 8.620e-78
Identity = 114/159 (71.70%), Postives = 132/159 (83.02%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 160
            LPSD  +DYVPLATMLATG L  ADQFTRDALI  AG  ++ R FVY+T+VKNIP TDL+TIE LW K+S GKFGYSVQ+ ++R+AK DFE FCR+IGW TKD EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+LI +LL+HPVW+ + WQ E
Sbjct:   74 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWSKFSKGKFGYSVQKRKYRQAKNDFEAFCRKIGWTTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKELLNHPVWDNDDWQKE 232

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7S2P4E3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4E3_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.210e-77
Identity = 112/159 (70.44%), Postives = 130/159 (81.76%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 160
            LPS    DYVPLATMLATG L  ADQFTRDALI+ +G  ++ R FVYWT+VKNIP  DL+TIE LW K+SGGKFGY+VQ+ +WR++KGDFE FCR+IGW T+D EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT LI  LL+HPVWE + W+ E
Sbjct:   65 LPSAVGKDYVPLATMLATGQLAEADQFTRDALIEISGAKAKGRSFVYWTEVKNIPNEDLATIERLWNKFSGGKFGYTVQKKKWRQSKGDFEAFCRKIGWTTQDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTPLIKNLLNHPVWENDDWKKE 223

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7S0FNL4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNL4_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.380e-77
Identity = 112/159 (70.44%), Postives = 129/159 (81.13%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 160
            LPSD  +DYVPLATMLATG L  ADQFTRDALI  AG   + R FVYWT+VK IP TDL+TIE LW K+SGGKFGYSVQ+  W+++KGDFE +C++IGW T+D EVERK RWFGA+EF YDV KAP GHLPLTSALRGT+LI QLL HPVWE + W+ E
Sbjct:   67 LPSDVGMDYVPLATMLATGQLVEADQFTRDALIVLAGSKEKGRDFVYWTEVKEIPATDLATIERLWNKFSGGKFGYSVQKRIWKRSKGDFELWCKKIGWTTQDGEVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKQLLDHPVWENDDWKNE 225

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BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A1Z5KQ11_FISSO (GUN4 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ11_FISSO)

HSP 1 Score: 238 bits (608), Expect = 2.690e-77
Identity = 112/159 (70.44%), Postives = 130/159 (81.76%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 160
            LPS   +DYVPLATMLATGDL  ADQFTRDALI+ +G  ++ R FVY+TDVKNIP TDL+T+E LW K+S GKFGYSVQ+ +W ++KGDFE FCR+IGW T D EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+LI  LL HPVW+ E W+ E
Sbjct:   68 LPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSTDLATMERLWNKFSKGKFGYSVQKKKWNQSKGDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNEDWKKE 226

[Close]

BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7R9YVG1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YVG1_9STRA)

HSP 1 Score: 238 bits (608), Expect = 3.280e-77
Identity = 109/159 (68.55%), Postives = 129/159 (81.13%), Query Frame = 0

Query:    3 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 160
            LPSD  +DY+PLATMLATG L  AD+FTR+ALI  AG     R FVYWT+VK IP TDL+TIE LW K+SGGKFGY+VQ+ +W+++KGDFE FCR+IGW T D EVERK RWFGA+EF YDV KAP GHLPLTSALRGT+LI +LL+HPVWE + W+ E
Sbjct:   72 LPSDVGMDYIPLATMLATGQLAEADEFTRNALITLAGSKDAGRNFVYWTEVKKIPSTDLATIERLWSKFSGGKFGYTVQKKKWKQSKGDFEVFCRKIGWTTTDGEVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKELLTHPVWENDDWKKE 230

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVS5_9PHAE	3.740e-98	85.35	GUN4 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A836C7C7_9STRA	2.820e-95	81.65	GUN4 domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A7S2R3S6_9STRA	7.570e-80	72.33	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S2MK00_9STRA	1.400e-78	71.70	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
B8C9C4_THAPS	4.340e-78	72.19	GUN4 domain-containing protein (Fragment) n=1 Tax=...	[more]
A0A6S8ZHG1_9STRA	8.620e-78	71.70	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
A0A7S2P4E3_9STRA	1.210e-77	70.44	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A7S0FNL4_9STRA	1.380e-77	70.44	Hypothetical protein n=1 Tax=Minutocellus polymorp...	[more]
A0A1Z5KQ11_FISSO	2.690e-77	70.44	GUN4 domain-containing protein n=2 Tax=Fistulifera...	[more]
A0A7R9YVG1_9STRA	3.280e-77	68.55	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.1770		coord: 73..158 e-value: 1.9E-26 score: 94.0
None	No IPR available	GENE3D	1.25.40.620		coord: 1..72 e-value: 2.2E-26 score: 95.2
None	No IPR available	PANTHER	PTHR34800:SF1	TETRAPYRROLE-BINDING PROTEIN, CHLOROPLASTIC	coord: 3..160
IPR008629	GUN4-like	PFAM	PF05419	GUN4	coord: 5..151 e-value: 2.5E-46 score: 157.2
IPR008629	GUN4-like	PANTHER	PTHR34800	FAMILY NOT NAMED	coord: 3..160
IPR037215	GUN4-like superfamily	SUPERFAMILY	140869	GUN4-like	coord: 2..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig116	contig	S-ischiensis_contig116:73966..74466 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig116.2477.1	mRNA_S-ischiensis_contig116.2477.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig116 73948..74466 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig116.2477.1 ID=prot_S-ischiensis_contig116.2477.1|Name=mRNA_S-ischiensis_contig116.2477.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=167bp
MTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYW
TDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIG
WNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSH
PVWETEWQAEWGHKEA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008629	GUN4-like
IPR037215	GUN4-like_sf