mRNA_S-ischiensis_contig116.2477.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A6H5KVS5_9PHAE (GUN4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS5_9PHAE) HSP 1 Score: 297 bits (760), Expect = 7.110e-100 Identity = 137/161 (85.09%), Postives = 147/161 (91.30%), Query Frame = 1
Query: 10 DIPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETEWQ 492
DIP TLPS+ IDYVPLATMLATGDLKGADQFTRDALIKAAG GSQKR FVYWT+VKNIP TDL+T+ENLWL YS GKFGYSVQ+D WRK KGDFENFCRRIGW T DAEVERKLRWFGANEFIYDVD+APRGHLPLTSALRGTTL+ +L+ HPVWETEW+
Sbjct: 95 DIPTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWE 255
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A836C7C7_9STRA (GUN4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C7_9STRA) HSP 1 Score: 286 bits (731), Expect = 6.220e-96 Identity = 131/163 (80.37%), Postives = 143/163 (87.73%), Query Frame = 1
Query: 10 DIPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETEWQAE 498
D P L SDA IDYVPLATMLATGD KGADQFTRDALI+AAGEGSQKRGFVYWTDVKNIP DL+TIE LWLKYSGGKFGYSVQ + W++ KGDFENFCR IGWNTK E+ERKLRWFGANEFIYD ++AP+GHLPLTSALRGT L+ +LL+HPVWETEW E
Sbjct: 63 DAPDNLSSDAGIDYVPLATMLATGDFKGADQFTRDALIRAAGEGSQKRGFVYWTDVKNIPNKDLATIEKLWLKYSGGKFGYSVQAEVWKRKKGDFENFCRTIGWNTKSEEIERKLRWFGANEFIYDAERAPKGHLPLTSALRGTQLLKELLNHPVWETEWNKE 225
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7S2R3S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3S6_9STRA) HSP 1 Score: 248 bits (634), Expect = 5.840e-81 Identity = 117/164 (71.34%), Postives = 134/164 (81.71%), Query Frame = 1
Query: 10 DIPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 498
+IP LPSD +DYVPLATMLATG L ADQFTRDALIK G + R FVYWT+VK IP TDL+TIE LW K+SGGKFGYSVQ+ +WR++K DFE FCR+IGW TKD +VERK RWFGA+EFIYDV KAP GHLPLTSALRGT+LI QLL+HPVWE + W+ E
Sbjct: 76 EIPTNLPSDMGMDYVPLATMLATGQLAEADQFTRDALIKLCGATEKGRNFVYWTEVKLIPSTDLATIERLWNKFSGGKFGYSVQKKKWRQSKNDFEVFCRKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKQLLTHPVWENDDWKIE 239
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A6S8ZHG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZHG1_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.160e-79 Identity = 118/167 (70.66%), Postives = 136/167 (81.44%), Query Frame = 1
Query: 1 APTDIPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 498
A DIP LPSD +DYVPLATMLATG L ADQFTRDALI AG ++ R FVY+T+VKNIP TDL+TIE LW K+S GKFGYSVQ+ ++R+AK DFE FCR+IGW TKD EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+LI +LL+HPVW+ + WQ E
Sbjct: 66 AEEDIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWSKFSKGKFGYSVQKRKYRQAKNDFEAFCRKIGWTTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKELLNHPVWDNDDWQKE 232
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7S2MK00_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MK00_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.180e-79 Identity = 116/163 (71.17%), Postives = 134/163 (82.21%), Query Frame = 1
Query: 13 IPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 498
IP LPSD +DYVPLATMLATG L ADQFTRDALI AG + R FVY+T+VKNIP TDL+TIE LW K+SGGKFGYSVQ+ +W+++KGDF+ FCR+IGW TKD EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L +LLSHPVWE + W+ E
Sbjct: 68 IPTVLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKEKGRDFVYFTEVKNIPSTDLATIERLWNKFSGGKFGYSVQKRKWKQSKGDFDLFCRKIGWLTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLCRELLSHPVWENDDWKKE 230
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7S0FNL4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNL4_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.060e-78 Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 1
Query: 10 DIPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 498
+IP LPSD +DYVPLATMLATG L ADQFTRDALI AG + R FVYWT+VK IP TDL+TIE LW K+SGGKFGYSVQ+ W+++KGDFE +C++IGW T+D EVERK RWFGA+EF YDV KAP GHLPLTSALRGT+LI QLL HPVWE + W+ E
Sbjct: 62 EIPTNLPSDVGMDYVPLATMLATGQLVEADQFTRDALIVLAGSKEKGRDFVYWTEVKEIPATDLATIERLWNKFSGGKFGYSVQKRIWKRSKGDFELWCKKIGWTTQDGEVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKQLLDHPVWENDDWKNE 225
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7S2P4E3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P4E3_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.320e-78 Identity = 114/164 (69.51%), Postives = 133/164 (81.10%), Query Frame = 1
Query: 10 DIPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 498
+IP LPS DYVPLATMLATG L ADQFTRDALI+ +G ++ R FVYWT+VKNIP DL+TIE LW K+SGGKFGY+VQ+ +WR++KGDFE FCR+IGW T+D EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT LI LL+HPVWE + W+ E
Sbjct: 60 EIPTKLPSAVGKDYVPLATMLATGQLAEADQFTRDALIEISGAKAKGRSFVYWTEVKNIPNEDLATIERLWNKFSGGKFGYTVQKKKWRQSKGDFEAFCRKIGWTTQDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTPLIKNLLNHPVWENDDWKKE 223
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A1Z5KQ11_FISSO (GUN4 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ11_FISSO) HSP 1 Score: 241 bits (615), Expect = 2.940e-78 Identity = 115/167 (68.86%), Postives = 133/167 (79.64%), Query Frame = 1
Query: 1 APTDIPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 498
A IP LPS +DYVPLATMLATGDL ADQFTRDALI+ +G ++ R FVY+TDVKNIP TDL+T+E LW K+S GKFGYSVQ+ +W ++KGDFE FCR+IGW T D EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+LI LL HPVW+ E W+ E
Sbjct: 60 AEIQIPTNLPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSTDLATMERLWNKFSKGKFGYSVQKKKWNQSKGDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNEDWKKE 226
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: A0A7R9YVG1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YVG1_9STRA) HSP 1 Score: 240 bits (613), Expect = 7.210e-78 Identity = 111/163 (68.10%), Postives = 131/163 (80.37%), Query Frame = 1
Query: 13 IPMTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVWETE-WQAE 498
IP LPSD +DY+PLATMLATG L AD+FTR+ALI AG R FVYWT+VK IP TDL+TIE LW K+SGGKFGY+VQ+ +W+++KGDFE FCR+IGW T D EVERK RWFGA+EF YDV KAP GHLPLTSALRGT+LI +LL+HPVWE + W+ E
Sbjct: 68 IPTILPSDVGMDYIPLATMLATGQLAEADEFTRNALITLAGSKDAGRNFVYWTEVKKIPSTDLATIERLWSKFSGGKFGYTVQKKKWKQSKGDFEVFCRKIGWTTTDGEVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKELLTHPVWENDDWKKE 230
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Match: B8C9C4_THAPS (GUN4 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9C4_THAPS) HSP 1 Score: 236 bits (603), Expect = 1.570e-77 Identity = 109/151 (72.19%), Postives = 127/151 (84.11%), Query Frame = 1
Query: 25 LPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWTDVKNIPCTDLSTIENLWLKYSGGKFGYSVQRDQWRKAKGDFENFCRRIGWNTKDAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLITQLLSHPVW 477
LPSD +DYVPLATMLATG L ADQFTRDALI AG ++ R FVY+T+VKNIP TDL+TIE LW K+SGGKFGYSVQ+ W+K+KGDFE +C +IGW TKD E+ERK RWFGA+EF YDV KAP+GHLPLTSALRGT+LI +LL+HPVW
Sbjct: 1 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWTKFSGGKFGYSVQKQIWKKSKGDFEVWCNKIGWTTKDGEIERKKRWFGASEFTYDVKKAPKGHLPLTSALRGTSLIKELLNHPVW 151 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig116.2477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig116.2477.1 >prot_S-ischiensis_contig116.2477.1 ID=prot_S-ischiensis_contig116.2477.1|Name=mRNA_S-ischiensis_contig116.2477.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=167bp MTLPSDADIDYVPLATMLATGDLKGADQFTRDALIKAAGEGSQKRGFVYWback to top mRNA from alignment at S-ischiensis_contig116:73948..74466+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig116.2477.1 ID=mRNA_S-ischiensis_contig116.2477.1|Name=mRNA_S-ischiensis_contig116.2477.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=519bp|location=Sequence derived from alignment at S-ischiensis_contig116:73948..74466+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig116:73948..74466+ >mRNA_S-ischiensis_contig116.2477.1 ID=mRNA_S-ischiensis_contig116.2477.1|Name=mRNA_S-ischiensis_contig116.2477.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1002bp|location=Sequence derived from alignment at S-ischiensis_contig116:73948..74466+ (Schizocladia ischiensis KU_0333)back to top |