prot_S-ischiensis_contig112.2435.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig112.2435.1
Unique Nameprot_S-ischiensis_contig112.2435.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length116
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig112.2435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 37..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig112contigS-ischiensis_contig112:21382..21729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig112.2435.1mRNA_S-ischiensis_contig112.2435.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig112 21163..21751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig112.2435.1 ID=prot_S-ischiensis_contig112.2435.1|Name=mRNA_S-ischiensis_contig112.2435.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=116bp
MPASTAPCSSHIFSSTLTLLSLEARGQWSRDYGNHNVSTSTYIYTSGLSA
TVLLLLRLDRGAWSMVSGLLYGNHNVSTSKYIYTAGLYCNCTATYTCLVL
TYLATGPPPPPPPPR*
back to top