prot_S-ischiensis_contig111.2432.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig111.2432.1
Unique Nameprot_S-ischiensis_contig111.2432.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length92
Homology
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BLAST of mRNA_S-ischiensis_contig111.2432.1 vs. uniprot
Match: A0A7S2V1M3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1M3_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.250e-13
Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 0 
Query:    2 GTLLPCALFARARTKFDGSNFLFNLL-LSPCLTRSIIGNGYNLESGWWNDCCMVSMCMPCVACQVYYEVDKRGPIDSEYLPAAVKAQ 87
            G   P    A+ART FDGS+  FN L  +PCL RS+I  GYN+E     D     +C+ CVACQ+  EV  RG +  +Y+      Q
Sbjct:  142 GCCCPSCAIAQARTDFDGSDCCFNFLCFTPCLARSVIREGYNIEGSCIMDILCPWLCVECVACQLMNEVSDRGKVTKQYVSVTAAPQ 228
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BLAST of mRNA_S-ischiensis_contig111.2432.1 vs. uniprot
Match: A0A7S2XYH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYH0_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.530e-12
Identity = 37/93 (39.78%), Postives = 51/93 (54.84%), Query Frame = 0 
Query:    2 GTLLPCALFARARTKFDGSNFLFNLL-LSPCLTRSIIGNGYNLESGWWNDCCMVSMCMPCVACQVYYEVDKRGPIDSE--YLPAAVKAQPMHR 91
            G   P    ++AR+ FDGS F FN   +SPCL RS+I  GYN+E   + D      C  C ACQ+  EVD+RG ++     +   + AQ M+R
Sbjct:  156 GMCCPHCAISQARSSFDGSEFCFNCCCVSPCLARSVIREGYNIEGNCFGDLIYPCCCPSCAACQMLNEVDERGKVNKRTVVMQQNLDAQVMNR 248
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig111.2432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2V1M3_9STRA4.250e-1341.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2XYH0_9STRA2.530e-1239.78Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..91
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig111contigS-ischiensis_contig111:127019..129658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig111.2432.1mRNA_S-ischiensis_contig111.2432.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig111 123823..130283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig111.2432.1 ID=prot_S-ischiensis_contig111.2432.1|Name=mRNA_S-ischiensis_contig111.2432.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=92bp
MGTLLPCALFARARTKFDGSNFLFNLLLSPCLTRSIIGNGYNLESGWWND
CCMVSMCMPCVACQVYYEVDKRGPIDSEYLPAAVKAQPMHR*
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