prot_S-ischiensis_contig110.2413.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig110.2413.1
Unique Nameprot_S-ischiensis_contig110.2413.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length142
Homology
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: A0A7S6U9Z6_9STRA (50S ribosomal protein L11, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z6_9STRA)

HSP 1 Score: 264 bits (675), Expect = 3.450e-89
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141
            MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID
Sbjct:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: B7T1U6_VAULI (50S ribosomal protein L11, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1U6_VAULI)

HSP 1 Score: 221 bits (562), Expect = 5.620e-72
Identity = 115/139 (82.73%), Postives = 129/139 (92.81%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISI 139
            M KKIT IIKLALPAGKA+P+PPVGPALSQHGVNIA+FCKEYNAKTADK DLIIPVEISVY+DRS++ +LKTPPAS+LL+KA NIK+GSSEPNKQ VASIS+ +LEEIA+IKLPDLNT KL SAIKIIEGTA+NMGI I
Sbjct:    1 MAKKITAIIKLALPAGKAMPSPPVGPALSQHGVNIASFCKEYNAKTADKGDLIIPVEISVYQDRSYTFILKTPPASILLSKAANIKKGSSEPNKQIVASISRIKLEEIAQIKLPDLNTMKLTSAIKIIEGTAQNMGIGI 139          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: A0A023HBU8_9STRA (50S ribosomal protein L11, chloroplastic n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A023HBU8_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.760e-70
Identity = 111/141 (78.72%), Postives = 124/141 (87.94%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141
            MPKKI  +IKLALPAGKA PAPPVGPAL QHGVNIAAFCKEYNA+T+DK  LIIPVEISVYEDRS++ VLKTPPASVLL  A  IK+GS+ PNK +V SI+K QLEEIA IKLPDLNTTK+ SAIKI+EGTA+NMGISI+D
Sbjct:    1 MPKKINALIKLALPAGKATPAPPVGPALGQHGVNIAAFCKEYNARTSDKMGLIIPVEISVYEDRSYTFVLKTPPASVLLANAAKIKKGSATPNKLTVGSITKAQLEEIANIKLPDLNTTKINSAIKIVEGTARNMGISIVD 141          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: A0A023HBV4_9STRA (50S ribosomal protein L11, chloroplastic n=2 Tax=Coscinodiscophyceae TaxID=33836 RepID=A0A023HBV4_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.920e-70
Identity = 113/141 (80.14%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141
            M KKIT +IKLALPAGKA PAPPVGPAL QHGVNIAAFCKEYNAKTA+K  LIIPVEISVYEDRS++ +LKTPPASVLLT A  IK+GSS P K  V S++K QLEEIA IKLPDLNTTKL SAIKI+EGTA+NMGISIID
Sbjct:    1 MAKKITALIKLALPAGKATPAPPVGPALGQHGVNIAAFCKEYNAKTAEKSGLIIPVEISVYEDRSYTFILKTPPASVLLTNAAKIKKGSSTPPKTMVGSVTKAQLEEIATIKLPDLNTTKLSSAIKIVEGTARNMGISIID 141          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: A0A089VNN0_CERBC (50S ribosomal protein L11, chloroplastic n=18 Tax=Sar TaxID=2698737 RepID=A0A089VNN0_CERBC)

HSP 1 Score: 214 bits (546), Expect = 1.590e-69
Identity = 110/141 (78.01%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141
            M KKIT +IKLALPAGKA PAPPVGPAL QHGVNIAAFCKEYNAKT DK  LIIPVEISVYEDRS++ +LKTPPASVLL KA  +++GSS PN+ +V SI+K QLEEIA IKLPDLNTTK+ SA+KI+EGTAKNMGISI D
Sbjct:    1 MAKKITALIKLALPAGKATPAPPVGPALGQHGVNIAAFCKEYNAKTGDKAGLIIPVEISVYEDRSYTFILKTPPASVLLAKAAKVQKGSSTPNRINVGSITKAQLEEIASIKLPDLNTTKISSAVKIVEGTAKNMGISITD 141          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: UPI001EDD1C44 (ribosomal protein L11 n=2 Tax=Thalassionema TaxID=33648 RepID=UPI001EDD1C44)

HSP 1 Score: 214 bits (546), Expect = 1.590e-69
Identity = 112/141 (79.43%), Postives = 122/141 (86.52%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141
            M KK+T +IKLALPAGKA PAPPVGPAL QHGVNIAAFCKEYNAKT DK  LIIPVEISVYEDRS++ +LKTPPASVLL  A  IK+GS  PNK SV SIS  QLEEIA+IKLPDLNTTK+ SAIKI+EGTA+NMGISIID
Sbjct:    1 MAKKVTGLIKLALPAGKATPAPPVGPALGQHGVNIAAFCKEYNAKTNDKTGLIIPVEISVYEDRSYTFILKTPPASVLLANAAKIKKGSQTPNKLSVGSISSTQLEEIAQIKLPDLNTTKISSAIKIVEGTARNMGISIID 141          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: A0A023HAL5_9STRA (50S ribosomal protein L11, chloroplastic n=4 Tax=Bacillariophycidae TaxID=33850 RepID=A0A023HAL5_9STRA)

HSP 1 Score: 213 bits (542), Expect = 6.480e-69
Identity = 111/141 (78.72%), Postives = 121/141 (85.82%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141
            M KKIT +IKLALPAGKA PAPPVGPAL QHGVNIAAFCKEYNA+T DK  LIIPVEISVYEDRS+  VLKTPPASVLL  A  IKRGS+ PNK  V SI++ QLEEIA IKLPDLNTTKL SA+KI+EGTA+NMGISI+D
Sbjct:    1 MAKKITALIKLALPAGKATPAPPVGPALGQHGVNIAAFCKEYNARTGDKVGLIIPVEISVYEDRSYKFVLKTPPASVLLANAAKIKRGSATPNKTRVGSITQAQLEEIANIKLPDLNTTKLSSAMKIVEGTARNMGISIVD 141          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: H2EV41_9STRA (50S ribosomal protein L11, chloroplastic n=1 Tax=Ulnaria acus TaxID=1436140 RepID=H2EV41_9STRA)

HSP 1 Score: 213 bits (541), Expect = 9.210e-69
Identity = 111/141 (78.72%), Postives = 122/141 (86.52%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141
            M KKIT +IKLALPAGKA PAPPVGPAL QHGVNIAAFCKEYNA+T DK  LIIPVEISV+EDRS++ VLKTPPASVLL  A  IKRGS  PNKQ V S++K QLEEIA+ KLPDLNTTK+ SAIKI+EGTA+NMGISIID
Sbjct:    1 MAKKITGLIKLALPAGKATPAPPVGPALGQHGVNIAAFCKEYNARTGDKVGLIIPVEISVFEDRSYTFVLKTPPASVLLANAAKIKRGSPTPNKQIVGSVTKAQLEEIAQTKLPDLNTTKISSAIKIVEGTARNMGISIID 141          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: A0A2U9NTG9_9STRA (50S ribosomal protein L11, chloroplastic n=1 Tax=Acanthoceras zachariasii TaxID=451788 RepID=A0A2U9NTG9_9STRA)

HSP 1 Score: 213 bits (541), Expect = 9.210e-69
Identity = 109/140 (77.86%), Postives = 123/140 (87.86%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISII 140
            M KK+T ++KLALPA KA PAPPVGPAL QHGVNIA FCKEYNA+T+DK  LIIPVEIS++EDRSF+ VLKTPPASVLL  A  IK+GS+ PNK +V SI+K QLEEIAKIKLPDLNTTK+ESAIKIIEGTA+NMGISII
Sbjct:    1 MAKKLTAVVKLALPAAKATPAPPVGPALGQHGVNIAGFCKEYNARTSDKAGLIIPVEISIFEDRSFTFVLKTPPASVLLVNAAKIKKGSATPNKTNVGSINKSQLEEIAKIKLPDLNTTKIESAIKIIEGTARNMGISII 140          
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Match: A0A0K1DD27_PSEMU (50S ribosomal protein L11, chloroplastic n=18 Tax=Ochrophyta TaxID=2696291 RepID=A0A0K1DD27_PSEMU)

HSP 1 Score: 212 bits (540), Expect = 1.400e-68
Identity = 112/143 (78.32%), Postives = 124/143 (86.71%), Query Frame = 0
Query:    1 MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKKDLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIK--RGSSEPNKQSVASISKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID 141
            M KKIT +IKLALPAGKA PAPPVGPAL QHGVNIAAFCKEYNAKT DK  LIIPVEISVYEDRS++ +LKTPPASVLL  A NIK  +GSS+PN   V SI+K QLEEIA +KLPDLNTTKLESA+KI+EGTA+NMGISI+D
Sbjct:    1 MAKKITALIKLALPAGKATPAPPVGPALGQHGVNIAAFCKEYNAKTGDKAGLIIPVEISVYEDRSYTFILKTPPASVLLVNAANIKDKKGSSKPNLIKVGSITKAQLEEIATVKLPDLNTTKLESAMKIVEGTARNMGISIVD 143          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6U9Z6_9STRA3.450e-89100.0050S ribosomal protein L11, chloroplastic n=1 Tax=S... [more]
B7T1U6_VAULI5.620e-7282.7350S ribosomal protein L11, chloroplastic n=1 Tax=V... [more]
A0A023HBU8_9STRA2.760e-7078.7250S ribosomal protein L11, chloroplastic n=5 Tax=B... [more]
A0A023HBV4_9STRA3.920e-7080.1450S ribosomal protein L11, chloroplastic n=2 Tax=C... [more]
A0A089VNN0_CERBC1.590e-6978.0150S ribosomal protein L11, chloroplastic n=18 Tax=... [more]
UPI001EDD1C441.590e-6979.43ribosomal protein L11 n=2 Tax=Thalassionema TaxID=... [more]
A0A023HAL5_9STRA6.480e-6978.7250S ribosomal protein L11, chloroplastic n=4 Tax=B... [more]
H2EV41_9STRA9.210e-6978.7250S ribosomal protein L11, chloroplastic n=1 Tax=U... [more]
A0A2U9NTG9_9STRA9.210e-6977.8650S ribosomal protein L11, chloroplastic n=1 Tax=A... [more]
A0A0K1DD27_PSEMU1.400e-6878.3250S ribosomal protein L11, chloroplastic n=18 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 9..140
e-value: 1.8E-73
score: 260.0
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 1..141
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 5..141
score: 27.987
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 2..72
e-value: 6.0E-31
score: 108.0
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 3..72
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 2..66
e-value: 3.8E-30
score: 103.5
NoneNo IPR availableGENE3D1.10.10.2720coord: 73..141
e-value: 1.2E-24
score: 88.0
NoneNo IPR availablePANTHERPTHR11661:SF10coord: 1..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePRODOMPD001367coord: 38..73
e-value: 4.0E-12
score: 168.0
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMTIGR01632TIGR01632coord: 3..140
e-value: 9.6E-59
score: 195.3
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 71..139
e-value: 5.9E-23
score: 81.2
IPR020785Ribosomal protein L11, conserved sitePROSITEPS00359RIBOSOMAL_L11coord: 126..141
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 68..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig110contigS-ischiensis_contig110:104066..104491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig110.2413.1mRNA_S-ischiensis_contig110.2413.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig110 104066..104491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig110.2413.1 ID=prot_S-ischiensis_contig110.2413.1|Name=mRNA_S-ischiensis_contig110.2413.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=142bp
MPKKITTIIKLALPAGKAVPAPPVGPALSQHGVNIAAFCKEYNAKTADKK
DLIIPVEISVYEDRSFSIVLKTPPASVLLTKATNIKRGSSEPNKQSVASI
SKPQLEEIAKIKLPDLNTTKLESAIKIIEGTAKNMGISIID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR036796Ribosomal_L11/L12_N_sf
IPR020784Ribosomal_L11_N
IPR006519Ribosomal_L11_bac-typ
IPR020783Ribosomal_L11_C
IPR020785Ribosomal_L11_CS
IPR036769Ribosomal_L11_C_sf