prot_S-ischiensis_contig110.2402.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig110.2402.1
Unique Nameprot_S-ischiensis_contig110.2402.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length1269
Homology
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A7U3NQV8_9STRA (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3NQV8_9STRA)

HSP 1 Score: 2503 bits (6486), Expect = 0.000e+0
Identity = 1268/1268 (100.00%), Postives = 1268/1268 (100.00%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNSQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTLNNNHNSNIKNDDQTKHHKLRSAIKFRYRI 1268
            MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNSQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTLNNNHNSNIKNDDQTKHHKLRSAIKFRYRI
Sbjct:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNSQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTLNNNHNSNIKNDDQTKHHKLRSAIKFRYRI 1268          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A8F0FAT1_9PHAE (DNA-directed RNA polymerase n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAT1_9PHAE)

HSP 1 Score: 1176 bits (3042), Expect = 0.000e+0
Identity = 611/1287 (47.47%), Postives = 873/1287 (67.83%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIE-DNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN---------------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFIN--FLENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKR-KIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 1266
            M++QS +F NNV+NKKELK II WAF N+G  KAA+ VD LK+IGF+YATK+GISIS+EDL+IPP+KT L+++A  +    E     GEI+EVER QK+I IWN TSE LKER+I + ++ DPLNSVYIMAFSGARGNISQVRQL+GMRGLMSDPNGQIID  I +NFREGLSITDYIISSYGARKG+VDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++E +E DN    SL++ + GRVLA +I  P T  IIA +NE IT  L EK++      +++RSPLTC+CRRS+CQ CYG NLA+GNLV+LGE VG+IAAQSIGEPGTQLTMRTFHTGG+FTS+  RQ R++CSGYI F  TL  R  RT+YG+D L+ EN+S+++++ Y N++  +++  +++I+V NN ++K N++LFE  PK K ++     +  + AK+SG+II+E   F  +    +  + +  + + W+LSG V  I F+ KL++  L  + K+Q++ QSK+     G+  F +N  T +I   K+ +        KI LE    +I +CK+YL+ +  + + P  L+  +  +G L   KYKTKTGG F+ +N               + + + GS++FY+PE++     +    K   GD+VNKKTEI+ NYF  I G I F+  K   +EI IKPG       ++ +  ++D QI+YPGEII  N++I   SY+E+ +    ++L LRP+ RYE  N   FN F PN+F    + +    L+++S  +IK + PI FI      +  F EN + + FE     + +++G   L+   ++  + ++PKE+ K+++ L+LFI++KQF +  +++ SFD I+PF   +  IK +    +  +LLTT+ DYK IF++      K NQLIK+ +    N   K+S L++++ GNK+ + +  PYLFSKGA +R   GD IK +++ GQL+YE + TGDIVQGLP++E+ILEAR PK EA ++   G I K I++  + LI+I  K S       ++    +   S  LL++K++ +++ Q LTEG LNPHT+L VYF+Y+ S+  LS+Y+++Y+S K++Q  LLNSVQA+Y SQGV I+ KH+E+I+++MT+++ I YPG TNFL GD+++L+Q  YIN C+ K   K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLTQA+I+G+ DW+ GLKEN I G+LIP GTGFY N D ++ KV +P   L   +NS++K   + K  KL+  IKF+Y
Sbjct:    1 MLKQSKIFSNNVINKKELKKIIEWAFNNYGQRKAAFFVDRLKEIGFEYATKSGISISIEDLRIPPAKTVLMQNATEDVFTTESRANNGEITEVERFQKLIYIWNTTSEELKERLIDFLKKTDPLNSVYIMAFSGARGNISQVRQLIGMRGLMSDPNGQIIDRAIGANFREGLSITDYIISSYGARKGIVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTERGIFLQESLEIDNKRFLSLKQLVNGRVLASSIFKPGTNEIIASRNEQITNELVEKLISLKITKVLIRSPLTCQCRRSVCQHCYGWNLASGNLVDLGETVGLIAAQSIGEPGTQLTMRTFHTGGIFTSELIRQSRSECSGYISFLPTLKIRPYRTDYGQDALISENRSWLRIVNYANEVLNVRVEDQTLILVKNNQYIKNNEVLFEAAPKLKEIKLAQKEIKYIYAKESGKIILENNGFPQEIVNDDFDRRSKKNYIFWVLSGQVLSIAFSAKLRVRKLKKVYKDQSIAQSKMVTTIGGFAHFCRNELTQEINGVKIQNFSKSLDSFKIFLEKSSFEIIKCKLYLSHYHEVLIKPEMLENRLFLIGFLNNKKYKTKTGGKFFISNFYKPTLLGTKLRNKINHKIKSGSTIFYLPEASIQTRTNKKDFKFKKGDFVNKKTEIFPNYFTSIDGFIDFEVGK-QIKEITIKPGQRYQVEGNISNWEQFDEQIYYPGEIILGNYKIEVLSYVEIENNNEAIYLHLRPITRYEFTNERPFNFFAPNFFTQVNLIIQDFNLHILSGQQIKLDAPIQFIDSPLTADYSFEENNTEMLFEFKGPEKKNSWGKVNLVYSQSLNFDVVIPKELTKQDICLNLFIEEKQFTDPYSIIGSFDSIMPFDNFIYNIKIKQNEVKSNVLLTTKADYKEIFLDSFTHTYKKNQLIKVHRLFNNNILIKDSGLLKEVLGNKLLYHLGQPYLFSKGALIRKVPGDYIKKQEIFGQLIYELMKTGDIVQGLPKIEDILEARKPKAEALLSTRQGFI-KAIKY-TSELIFIITKPS-------LKSDYYTASRSDRLLVKKYESISIGQPLTEGALNPHTLLHVYFRYFYSLGTLSIYESAYHSIKRLQTLLLNSVQAIYISQGVIISSKHVELIVREMTHKVYIEYPGKTNFLPGDIVDLDQANYINLCIKKNNNKVGFRPILLGITKSSLKTDGFLAAASFQETTRVLTQAAIQGKTDWLRGLKENAITGRLIPAGTGFYLNQDITFNKVLLPKTGLEEKNNSSLKKQLRLKQAKLKRVIKFKY 1277          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A8F0F804_9PHAE (DNA-directed RNA polymerase n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F804_9PHAE)

HSP 1 Score: 1166 bits (3017), Expect = 0.000e+0
Identity = 616/1286 (47.90%), Postives = 850/1286 (66.10%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILF-SLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN---------------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFL--ENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 1266
            M+ +S +F NN +NKKELK II WAFKN+G  KAAY VD+LK+IGF+YATK+GISIS+EDL+IPP+K  L++ A  +   AE +   GEI+EVER Q++I IWN TSE LKER+I +F++ DPLNSVYIMAFSGARGNI+QVRQLVGMRGLMSDPNG+IID  I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI I+E +E ++  F SL E + GRVLA +I  P TK  IA +N+ ITP L EK++K+  N +++RSPLTCECRR++CQ CYG NLA G LVELGE VG+IAAQSIGEPGTQLTMRTFHTGG+FTS+  RQ RA CSGY+ F   L     RTNYG+D +V ENQS++ +I Y N+I ++++  ++II+V N++++K+N +LFE  PK K +      +  + AK+ GEI++EK  F   +      + +  + + W+LSG V  I F T LKI  L  I +NQ + QSK+     G++ F +N  T +I    + +S       KI LE  + ++T+CK+YL+    I L P   +  + +LG L+  KYKTKTGG FY +N               + + + GS++FYIPE+T     +    K   G YVNK  EI+ NYF +I G   + ET+   + I IKPG       ++    E + Q++YPGE I + FEI   SYIE   I   ++L +RP+ RYE  N     NF PN F P  + ++   L ++S   IK + PI F+     I++    N + + FE     + ++YG  KL      + + ++PKE+ K ++ L+L +++KQFV+  T+L SFD + PF   V  IK +  + +  +LLTT+ DY+ IF++      K NQ +K+ K    N   K S L+ +++GNKI   +  PY FSKGA +R   GD IK ++  GQLVYERL TGDIVQGLP+++ ILEAR PK EA ++   G I K I++  + ++       R D  I           S  LL++K++ ++V Q LTEG LNPHT+L VYF+Y+CS+  LS+Y+++Y S KK+Q  LL SVQA+Y SQGV I+ KH+E+I+++MT+++ I YPG TNFL GD+++L+Q +YIN C+    K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLT+A+I+G+ DW+ GLKEN I G+LIP GTGFY+N D ++ K  +P   +    N ++K   + K  KL+  IKF+Y
Sbjct:    1 MLNRSKIFSNNTINKKELKKIIEWAFKNYGQRKAAYFVDQLKEIGFEYATKSGISISIEDLRIPPAKIPLMKIASQDVFLAESQANNGEITEVERFQRIIYIWNSTSEELKERLIDFFKKNDPLNSVYIMAFSGARGNIAQVRQLVGMRGLMSDPNGKIIDRAIGANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTERGIFIEEDLEKDEKGFLSLNELLNGRVLASSIFKPGTKDSIALRNQQITPSLLEKLLKFKINKVLIRSPLTCECRRAVCQHCYGWNLALGTLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGIFTSELIRQGRAHCSGYLNFLPELKVSPYRTNYGQDAVVSENQSWLAIINYANEIVKVRVEARTIILVANHNYIKRNQVLFEAAPKIKEINLAEKEIKYICAKEPGEIVLEKNGFPEDSSNEIFTQRSKKNYIFWVLSGQVFSIGFNTALKIRKLEKIYRNQAIAQSKMVTTIGGFVHFSRNKLTQEINSLNIQNSSEGLGNFKIFLERNNIEVTKCKVYLSHTHEILLKPELFNNRLFSLGFLRNKKYKTKTGGQFYISNFYKPTLIGNKLGNKSTGKFKSGSTIFYIPEATIQTTSNKKDFKFKKGSYVNKNKEIFPNYFTNIEGFADY-ETEKRTKCITIKPGQRYLLDKNIKLHKEINEQVYYPGEFILNQFEIEVLSYIEFEDINEQVYLYIRPITRYEFTNERPIKNFQPNCFAPLDVMVENFNLQIVSGQHIKIDYPIQFVDSPLVIDYSLQSNDTELIFEFKGPEKKNSYGQVKLSYSQTFLFDTVIPKELKKTDISLNLIVEEKQFVDPYTILGSFDTLFPFDNFVHSIKIKRNSIKSNVLLTTKSDYQEIFLDSFTHNYKQNQFLKVNKLFNNNALIKNSGLMHEVAGNKIVLHLGQPYFFSKGALIRKIPGDYIKKQENFGQLVYERLKTGDIVQGLPKIDNILEARKPKAEALLSTRQGFI-KSIKYSSDLILISTTPSLRQDYYI--------ASRSERLLVKKYECISVGQPLTEGPLNPHTLLHVYFRYFCSLGTLSVYESAYRSLKKLQTLLLTSVQAIYISQGVIISGKHVELIVREMTHKVFIEYPGKTNFLPGDIIDLDQAQYINLCIKNNNKLGFRPILLGITKSSLKTDGFLAAASFQETTRVLTRAAIQGKTDWLRGLKENAITGRLIPAGTGFYANQDITFNKALLPEKLVTKKDNLSLKKQLKLKQTKLKKLIKFKY 1276          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: D1GJH4_FUCVE (DNA-directed RNA polymerase subunit beta'' n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH4_FUCVE)

HSP 1 Score: 1151 bits (2978), Expect = 0.000e+0
Identity = 614/1286 (47.74%), Postives = 852/1286 (66.25%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIE-DNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNS---------------QRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSN--IFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 1266
            M   S +F NN++NKKELK II WAF N+G  KAAY VD+LK +GF+YATK+GISIS+EDL+IPP KT L+++A  +    E +   GEI+EVER QK+I IWN TSE LKER+I +F++ DPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIID  I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++E IE D     S++E I GRVLA +I  P TK ++A++N+ +T  L ++I+      I++RSPLTCECRR++CQ CYG NLA+GNLVELGE VG+IAAQSIGEPGTQLTMRTFHTGGVFT + +RQ RA+CSGYI+F  TL     RTNYG+DV++ ENQS++ +I Y N+I  IK+  +++I+V N++++K+N +LFE  PK K +      +  V AK+SGEII+EK  F       +  + +  + + W+LSG V  IPF T +KI  L  I KNQ L QSKI     G+I F +N  T +II  K+ +S       KI LE+K+ ++  CK+YL+    I L P  L   + +LG LK  KYKTKTGG FY +NS                R ++GS++FYIPE+T   N + +  K     YV +  EI+ NYF +I G I F E +   + I IKPG       ++   L+ + Q+++PGE+I + FEI + SY+E+ +  N L+L +RPV RYE  N  +      N F+  +++++     ++S  ++K + PI F+     I+   + +N  I FE+ Q  + ++Y    L+   N + + I+P E+    + L+L +++KQF++    +AS D IIPF+  V  IK +    +  ILLTT+ DY+ +F++       NNQLI +      N   K S L++ I GNKI   +  PY FSKGA +R   GD IK ++  GQL+Y+RL TGDIVQGLP++ +ILEAR PK EA ++   G I K I++    +I +      ++          +      LL++K++ ++V Q +TEG LNPHT+L VYF+Y+ S+  LS+Y+A+Y S KK+Q  LL SVQA+Y SQGV I+ KH+E+I+++MT+++ I YPG TNFL GD+++L Q +YIN  +    K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLT A+++G+ DW+ GLKEN I G+LIP GTGFY + D ++ KV +P   +   +N ++K     K +KLR+ I+F+Y
Sbjct:    6 MSSNSKIFSNNIINKKELKKIIEWAFNNYGQRKAAYFVDQLKGLGFEYATKSGISISIEDLRIPPVKTTLMKNATRDVFITESKANNGEITEVERFQKIIYIWNNTSEELKERLIDFFKKTDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDRAITANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTKRGILLQEDIESDKKKFLSVKELINGRVLATSICKPGTKELVAFRNQQVTSSLTKQIINLKIAKILIRSPLTCECRRAVCQHCYGWNLASGNLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTGELTRQGRAECSGYIQFLPTLKVIPYRTNYGQDVVMSENQSWLTIINYANKIINIKVESRTLILVNNHNYIKQNQVLFEAAPKIKDINLSQKEIKYVCAKRSGEIILEKNGFPGAFSNEDFTRRSKKNYIFWVLSGKVFSIPFNTSIKIRKLEKIYKNQALAQSKIVTTMGGFIHFCRNTLTQEIISLKVQNSFQSQNNFKIFLETKNLEVINCKVYLSHNHEITLKPELLKNQLFSLGLLKNNKYKTKTGGYFYISNSYKSNLLDDKKVNNLINRLKFGSTIFYIPEATIQTNTNKSDFKFKKDSYVTRHQEIFPNYFTNIKGFIDF-ELEKQIKYITIKPGEKYLLKENINSFLDINEQVYFPGELILNKFEIKSLSYLEIINSNNQLYLFIRPVTRYEFTNEISKKILERNPFNDIKLKINNFNFYILSGQQVKIDEPIQFLDSTITIDSFLHLNNREIMFELKQIKEKNSYIQVNLLYSQNFLFDTIIPNEIKNSNINLTLIVEEKQFIDPYATIASLDTIIPFSNFVYNIKTKRNAVKANILLTTKSDYQEVFLDSFTHNYINNQLIHINNLFPNNVCIKNSGLLKSIKGNKILLHLGDPYFFSKGALIRKIPGDYIKKQENFGQLIYQRLKTGDIVQGLPKIADILEARKPKTEALLSTRQGFI-KSIKYTEELIIIVTKPTISYECF--------TTSRPERLLVKKYESISVGQPITEGPLNPHTLLYVYFRYFHSLGTLSIYEAAYRSIKKLQILLLMSVQAIYTSQGVIISAKHIELIVREMTHKVYIEYPGKTNFLPGDIIDLNQAQYINLSIQNGHKLGFRPILLGITKSSLKTDGFLAAASFQETTRVLTHAALQGKTDWLRGLKENAITGRLIPAGTGFYLDQDIAFNKVLLPEKLITGQNNLSLKKQLNLKKNKLRTRIRFKY 1281          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A0R6M448_UNDPI (DNA-directed RNA polymerase n=32 Tax=Laminariales TaxID=2886 RepID=A0A0R6M448_UNDPI)

HSP 1 Score: 1148 bits (2970), Expect = 0.000e+0
Identity = 612/1293 (47.33%), Postives = 851/1293 (65.82%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILF-SLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN---------------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLID-----ILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFL--ENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTG--FYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 1266
            M++QS +F NN++NKKELK II WAFKN+G  KA Y VD+LK+IGF+YATK+GISIS+EDLKI P+K+ L+  A  +   AE +   GEI+EVER Q++I IWN TSE LK+R+I++F++ DPLNSVYIMAFSGARGNI+QVRQLVGMRGLMSDPNG+IID  I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++E +E ++  F SL+E + GR+LA  I  P +K I+A +N+ ITP + E+++K+  N +++RSPLTCECRR++CQ+CYG NLA G LVELGE VG+IAAQSIGEPGTQLTMRTFHTGG+FTS+  RQ RAQCSGYI F   L     RTNYG+D +V ENQS++ +I Y N+I ++++  ++II+V NN+++K+N +LFE  PK K +      +  + AK+ GEI +E   F       N  K +  + + W+LSG V  I F T L++     I KNQ + QSK+     G+    +N  T +I    + +        KI +E  + ++T+CK+YL+    I L P  L+  + +LG L+  KY+TKTGG FY +N               + + + GS++FYIPE+      +    +   GDYV K  EI+ NY  +I G I F E +   + I IKPG        L+D       E++ Q++YPGE++ D FE+   SYIE   I N ++L +RP+ RYE  N      F  N F P  + ++   L + S  +IK + PI F+     I++    N + + FE     + ++YG   LI     + + ++PKE+ K ++ L+LF+++KQF++  T++ SFD I PF   V  +K +  N +  ILLTT+ DY+ IF++    + K NQ +K+ K    N   K S L+EQ+SGNKIT  +  PY FS GA +R   GD IK ++  GQLVYERL TGDIVQGLP+++ ILEAR PK EA +A   G I K I++  N ++        +D  I           S  LL++ ++ + V Q LTEG LNPHT+L VYF+Y+CS+  LS+Y+++Y S KK+Q  LL SVQA+Y SQGV I+ KH+E+I+++MT+++ I YPG TNFL GD+++L+Q +YIN C+    K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLT+A+I+G+ DW+ GLKEN I G+LIP GTG  FY+N D ++ KV +P   +    N ++K   + K  KL+  IKF+Y
Sbjct:    1 MLKQSKIFSNNIINKKELKKIIEWAFKNYGQRKAVYFVDQLKEIGFEYATKSGISISIEDLKISPAKSALMEIASNDVFLAESQANNGEITEVERFQRIIYIWNSTSEELKDRLIEFFKKNDPLNSVYIMAFSGARGNIAQVRQLVGMRGLMSDPNGKIIDRAIGANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTERGIFLEEDVEKDEKGFLSLKELLNGRILALTIFKPGSKEILALRNQEITPSVIEELVKFKINKVLIRSPLTCECRRAVCQQCYGWNLALGTLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGIFTSELIRQGRAQCSGYINFLPELKISPYRTNYGQDAVVSENQSWLAIINYANEIVKVRVEARTIILVNNNNYIKRNQVLFEAAPKIKEINLAEKEIKYICAKEPGEIFLENDGFPQTLINDNFSKRSKKNYIFWVLSGQVFSIAFNTNLRVRKSEKIYKNQAIAQSKMVTTIGGFTHLSRNRLTQEINSLSIQNCSYGLNDFKIFIERNNIELTKCKVYLSHTHEIVLKPELLNNRLFSLGSLRNKKYRTKTGGKFYISNFYKPSLFGHPSGNNFTNKLKSGSTIFYIPEALVQTTSNKKDFRFKKGDYVKKDIEIFPNYITNIEGFIDF-EVEKRIKYISIKPGQ-----RHLLDKRPKLSKEFNEQVYYPGELVLDKFEVKVLSYIEFEEINNEIYLYIRPITRYEFTNERAVKIFESNCFAPLNLLVENFNLQVRSGQQIKIDYPIQFVDSPLTIDYSLQSNDTELIFEYKGPEKKNSYGQVNLIYSQTFLFDSVIPKEIKKTDISLNLFVEEKQFIDPYTVVGSFDTIFPFDNFVYNVKIKRNNIKSNILLTTKSDYEEIFLDSFTHKYKQNQFLKVNKLFNNNVLIKNSGLMEQVSGNKITLHLGQPYFFSTGALIRKIPGDYIKGQENFGQLVYERLKTGDIVQGLPKIDNILEARKPKNEALLATRQGFI-KSIKYTSNLILISTLPSKSYDYYI--------ASRSERLLVKNYESICVGQPLTEGPLNPHTLLHVYFRYFCSLGTLSIYESAYRSLKKLQTLLLTSVQAIYISQGVIISGKHVELIVREMTHKVYIEYPGKTNFLPGDIIDLDQAQYINLCIKNNNKLGFRPILLGITKSSLKTDGFLAAASFQETTRVLTRAAIQGKTDWLRGLKENAITGRLIPAGTGTGFYANQDITFNKVLLPDSLITKKDNLSLKKQLKLKQTKLKKLIKFKY 1278          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A8E6D2G6_9PHAE (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D2G6_9PHAE)

HSP 1 Score: 1130 bits (2922), Expect = 0.000e+0
Identity = 582/1253 (46.45%), Postives = 841/1253 (67.12%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFY--------STNS---QRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSI-KNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFL--ENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTL 1239
            M ++S +FCN ++NK+ELK +I+WAFKN+G  KA +LVD+LK +GF+YATK+GISISLEDLK+PP KT L+  A  + ++ E+E   GEI+EVER QK+I IWN TSE LK+RV+ +F+  DPLNSVYIMAFSGARG+++QVRQLVGMRGLM+DPNGQIID+PI +NFREGLS+TDYIISSYGARKG+VDTAIKTADSGYLTRRLV++AQ ++I E DC ++ G+ +++ +  N++  SL++R +GRVLA  +  P+   I+  +N+ ITP LAE+   +   SI++RSPLTCECRRS+CQ+CYG NLA+  LV+LGE +GI+AAQSIGEPGTQLTMRTFHTGGVFTS+ +RQVRA  +GYI F  T+  R +RTNYG+D L+ +  S I+LITY+N+IK+IK+ P++II+V N  +VKKND+L E   + + M      +  V+AK  GEI+ E++ +     +   + +  V+ L WILSG V  IP   K+       + KNQ+L QS+I     G++ F+   +T K++  K+ +S  + ++ +I +E     I  CK+Y ++   I +N     +    LG L   K+KT+T G FY        S+N+   +RT  G +VFY+P+ST      +   K     +V++  E++ N+F  + G + F ETK   +E+ IKPG      NS++D+   D Q++YPGEI+F   EI   SY+E+ SI K  +++ +RP+ RYE+    +      N+F   ++++    +N  S + +K      FI      ++    N S I FE   + +  ++    L      + + ++PKE+ K+++ ++L +Q++QFVE  + L + D++      +  IK++   K++ I++ T+ D+K I+++D D   + +Q IK  +K G N     S LI+++ GNK+ + +  PYLFS+GA +    GD IK  + LGQLVYERL TGDIVQGLP+VEEILEAR+PK +A ++  PG+I   I+  +   I I  + S      ++      +  +  LL++KFDFVNV Q LTEG LNPH +LD+YFQY+CS+  LS+YQ++Y+S KKVQ FL++SVQ++Y+SQGV I+DKH+E+II++MT++I I  PG+TNFL GD+L+LEQ  +IN  L  + KI F+PIL GITKS+LKA+ FL+AASFQ TTRVLT A+++G+ DW+ GLKENVI G+LI  GTGFY NND +Y K  +P +
Sbjct:    1 MRKKSRIFCNKIVNKQELKKLISWAFKNYGQRKAVFLVDQLKALGFEYATKSGISISLEDLKVPPVKTFLMTKATQDVIQTEFEVNNGEITEVERFQKIIRIWNNTSEDLKDRVVDFFKTTDPLNSVYIMAFSGARGSLAQVRQLVGMRGLMADPNGQIIDLPITTNFREGLSVTDYIISSYGARKGIVDTAIKTADSGYLTRRLVEVAQGIIISERDCYTRSGLLLRKRVTKNEVPLSLKQRAIGRVLANAVFSPKNGQILGKRNQCITPHLAEEFTNFQIPSILIRSPLTCECRRSVCQQCYGWNLASAKLVDLGESIGIVAAQSIGEPGTQLTMRTFHTGGVFTSEKTRQVRANHAGYINFLPTMKARFIRTNYGQDALINDRDSHIQLITYSNEIKKIKVSPETIILVKNKIYVKKNDVLLEFTSRTRNMYPAEKEVKYVLAKHGGEIVSEEKGYRQPFDSEQFKVNKGVNRLFWILSGQVYDIPIKAKINARTFQKVYKNQSLAQSRIVTMIGGFVSFLMIPSTEKVLGIKINNSFRITKQARIFIERSYLGIRSCKMYFSRKSDISINFGLSHEQHFLLGYLNSRKFKTRTAGTFYTDQFYNSSSSNNHSERRTRSGGTVFYLPKSTVETTTAIRNFKFKKRSFVSRDKEVFPNFFTSVEGFVNF-ETKNKIKEVSIKPGLRYFLKNSIVDVDTIDQQLYYPGEILFKTIEIKKLSYLEIESITKRGIYIYVRPITRYEVTRDNSRKFLQRNYFGDIKLKVGNFVMNATSGINLKGNGAFQFIYSPVVFDYPLHSNNSEIRFEFRNSRKRKSWSEVFLNCSQTFLIDPLIPKELKKDDISVNLLVQNEQFVEPYSTLIAIDIVARKDNFIYEIKQKYTGKKRTIIMITKADHKSIYLDDFDHPYRKDQFIKRDQKFGGNLTISSSGLIKKVDGNKLLYHLGQPYLFSQGAFVNKLPGDFIKTHENLGQLVYERLKTGDIVQGLPKVEEILEARNPKNQAVLSKRPGLIYD-IDRDIPQSILISARPS------SLYFGNYFVSKANRLLVKKFDFVNVGQPLTEGPLNPHNLLDIYFQYFCSLNTLSLYQSAYFSIKKVQSFLISSVQSIYFSQGVIISDKHIELIIREMTSKIWIEDPGETNFLPGDILDLEQANFINLSLRSENKILFRPILFGITKSSLKADSFLAAASFQETTRVLTNAAVQGKTDWLRGLKENVITGRLITAGTGFYLNNDLTYKKALLPPV 1245          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A8F0F9S6_9PHAE (DNA-directed RNA polymerase n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9S6_9PHAE)

HSP 1 Score: 1114 bits (2881), Expect = 0.000e+0
Identity = 594/1293 (45.94%), Postives = 838/1293 (64.81%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIK--EIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNSQRTEY---------------GSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREII-IKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINF-LE-NYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHK---GSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMP----TLNNNHNSNIKNDDQTKHHKLRSAIKFRY 1266
            M+++S +F NN++NKKELK II WAF+N+G  KAAY VD+LK+IGF+YATK+GISIS+EDLKIPP+K +L+  A      AE +   GEI+EVER Q++I+IW+ TSE LKER++ +F+++DPLNSVYIMAFSGARGNI QVRQLVGMRGLM+DPNG+IID  I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++  E  ++ND+L  ++E + GRVLA +I  P T  +I  +NE +T  L ++++K+    I++RSPLTC+CRR++CQ CYG NLA G LV+LGE VG+IAAQSIGEPGTQLTMRTFHTGGVFT    RQ RA  SGYI F   L     RT+YG+D +V ENQS++ ++ Y+N++ ++++  ++II+V N   +++N +LFE  PK   M      +  + AK+SGEI++EK +F   +   N  K    +   W+LSG V  I F TKLK   L  I KNQ + QSKI     G++ F +N  T++I    + +        KI +E  +T++TQCK+YL++   I + P   D  + +LG L   KYKTKTGGNFY ++  + +                GS++FY+PE+T     +    K     Y+ K  +I+ NYF  I G I F+  K N    I IKPG      N L    E D Q++YPGEI+ D FE+   SY+E+ +  N ++L  RP+ RYE  N    N    N F P  I +D   L + S  +IK + PI F+     +++ LE N + + FE     + ++YG   LI     + + ++PKE+ K+ + L++ +++ QF +  T++ SFD I  F   +  IK +  +++  +LLT + DY+ IF++      K NQ + + K    N   + S  I+++SGNKI   ++ PY FS+GA +R   GD IK +++ GQL+Y RL TGDIVQGLP+++ ILEAR PK E+ +A   G +  +     +  IWI  K   G R   L            S  ++++ ++ ++V Q LTEG LNPHT+L VYF+YYCS+  LS Y+++Y S KK+Q  LL SVQA+Y +QGV I+ KH+E+II++MT ++ I Y G TNFL GD+++L+Q  YIN C+    K+ F+PILLGITKS+LK +GFL+AASFQ T RVLT+A+I+G+ DW+ GLKENVI G+LIP GTGFYSN D ++ K  +P    T+  + N ++K   + K  KL+  IKF++
Sbjct:    1 MLKRSKIFSNNIINKKELKKIIEWAFRNYGQRKAAYFVDQLKEIGFEYATKSGISISIEDLKIPPAKISLMESASHAISLAESQASNGEITEVERFQRIIHIWSTTSEELKERLVDFFKKRDPLNSVYIMAFSGARGNIEQVRQLVGMRGLMADPNGKIIDKAIGANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIINELDCKTRRGIFLEDEEKTDENDVL-PMRELLNGRVLASSICKPDTNEVIGVRNEQLTSTLIDELIKFKIPKILIRSPLTCQCRRAVCQHCYGWNLALGTLVDLGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTGQLIRQGRATSSGYINFLPELKLSPYRTDYGQDAVVSENQSWLGILNYSNRMVKVRVEARTIILVANKKHIRRNQVLFEAAPKINEMNLAEKEIKYICAKESGEIVLEKNSFPYDSSNENFTKRTKKNYSFWVLSGQVFSIAFNTKLKARKLEKIYKNQAIAQSKIVTTIGGFVHFSRNKLTNEINGLSIQNRYHGQNNFKIFIEKNNTEVTQCKVYLSQTLEILIKPELFDNQLFSLGFLSNKKYKTKTGGNFYISDFYKPKLLGDKSTKNLIGKQKSGSTIFYLPEATIKTTSNKKDFKFKRKTYIKKNKKIFPNYFSTIDGFIDFEVDKENKYITINIKPGQRYLLENQLDLYKELDEQVYYPGEIVLDQFEVKRLSYLEIENGTNEIYLYFRPITRYEFTNTSPVNILKSNCFAPLNIVIDNFNLKISSGQEIKIDYPIQFVDSPLVVDYSLESNDTELIFEFKGPYKQNSYGELNLICSQTFLFDTLIPKEIKKDSIALNVLVEENQFTDPYTIVGSFDSIFRFDNFIYTIKTKRNSRKSNVLLTVKSDYEEIFLDSFTHNYKQNQFLGVNKLFNNNSLIRNSGWIKELSGNKIVLHLAQPYFFSRGALIRKIPGDYIKKQEIFGQLIYVRLKTGDIVQGLPKIDNILEARKPKTESMLATQQGFVRSI--RYTSDSIWIITKPALGLRRYLLTR----------SQRIVVKNYESISVGQPLTEGPLNPHTLLHVYFRYYCSLGTLSTYESAYRSLKKLQGLLLMSVQAIYMAQGVIISGKHVELIIREMTQKVSIEYQGTTNFLPGDIIDLDQANYINKCIKNDDKLEFRPILLGITKSSLKTDGFLAAASFQETARVLTRAAIQGKTDWLRGLKENVITGRLIPAGTGFYSNQDLTFNKALLPEKQLTMKKD-NLSLKKQLKLKEKKLKKIIKFKF 1279          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A110AQ85_9PHAE (DNA-directed RNA polymerase n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A110AQ85_9PHAE)

HSP 1 Score: 1111 bits (2874), Expect = 0.000e+0
Identity = 596/1291 (46.17%), Postives = 842/1291 (65.22%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN---------------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFIN-FLE-NYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPN------SIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 1266
            M+ +S +F NN++NKKELK II WAF N+G  KAAY VD+LK++GF+YATK+GISIS+EDL+IP SK  L++ A       E     G I+EVER QK+I+IWN TSE LKE +I + +  DPLNSVY+MAFSGARGNISQVRQL+GMRGLMSDPNGQIID  I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I +LDC+++RGI +++   D+    S +E + GR+LA +I  P+TK II ++N+L+T  L E+I+K+N   I++RSPLTCECRRSICQ CYG NLA+GNLVELGE VG+IAAQSIGEPGTQLTMRTFHTGGVFT   +RQ RA+CSGY+ F  TL     RT+YG+DV++ ENQS +K+I Y N+  ++K+  +++I+V N++++K+N +LFE  PK K +      +  +  K+ GEII+E+  F    ++ +  K +  + + W+LSG V  + F   LK   L NI KNQ L QSKI     G+I   +   T +++  K+ +S       KI LE+ + +I  CKIYL+    I L P      + ++G L+  KYKTKTGG FY +N               + + ++GS++FYIPE+T   N +    +   G Y+ +  EI+ NYF  IAG ++ +  K   + + IKPG      +++        Q+++PGE+I + F I   SY+E+ +  NN++L +RP+IRYE            N F+   ++++   L + S  +I+ + PI  +     I+ FL+ N + + FE  +  + ++Y    L    N I + I+P E+ K ++ L+L ++D QF +  ++LASFD +I F   V  IK +  N +  +LLTT+ DY+ IF++  + Q K  QLI        N   K S L++ + GNKIT  +  PY FSKGA +R   GD IK ++  GQL+YERL TGDIVQGLP++ +ILEAR PKVEA ++     I K I++               D+LI I   PN      +   S  LLI+K++ + + Q LTEG LNPHT+L +YF Y+ S+  LS+Y+++Y S KK+Q FLL SVQ +Y SQGV I+ KH+E+I+++MT+++ I YPG T FL GD+++L+Q +YIN  L  + K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLT A+++G+ DW+ GLKEN I G+LIP GTGFY + D +Y K+ +P   +N  +N N+K   ++K  + ++ IKF+Y
Sbjct:    1 MLRKSKIFSNNIINKKELKKIIEWAFNNYGQRKAAYFVDQLKEMGFKYATKSGISISIEDLRIPASKVTLMQAATKEVFFTESRANNGAITEVERFQKIISIWNRTSEELKESLIDFLKRNDPLNSVYVMAFSGARGNISQVRQLIGMRGLMSDPNGQIIDRAITANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISQLDCQTKRGIVLQQ---DSKEFLSTKELLYGRILASSICKPKTKEIIGFRNQLVTSSLIEQIIKFNIPKILIRSPLTCECRRSICQHCYGENLASGNLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTGQLTRQGRAECSGYVIFLPTLKVIPYRTSYGEDVVMSENQSSLKIINYANKDIKVKVESRTLILVNNHNYIKRNQVLFEAAPKIKDINLAKKEIKYIYVKEGGEIILERNGFPQNCESEDFTKRSRKNYIFWVLSGRVFSLSFNINLKARKLENIYKNQALAQSKIITTIGGFIYIYRCKLTQRVMGLKVQNSFQGQNNFKIFLENNNLEILHCKIYLSHNDEIILKPKLFQNRIFSIGFLQNNKYKTKTGGYFYISNYYKPNLLKSNEINKLNYKLKFGSTIFYIPEATIQTNTNKKDFRFKDGSYIERHQEIFPNYFATIAGFLKLEGEK-QIKCVTIKPGEKYLLEDNIDFFRTLSEQVYFPGELIGNQFSIKVLSYLEIIADNNNIYLYIRPIIRYEFTTLSCNKILKSNIFNITNLKINNFNLRVSSGQQIQIDEPIQILDSTITIDSFLQSNDTEVLFEFKEVKRKNSYIKVNLFYSQNFIFDNIIPNEIKKTDIFLNLIVEDNQFTDPYSILASFDTLIQFNNFVYTIKTKRNNIKSNMLLTTKSDYQEIFLDTHNHQYKQAQLIYRNSLFPNNVCIKNSGLLKSVIGNKITLHLGEPYFFSKGALIRKLPGDYIKKQENFGQLIYERLKTGDIVQGLPKIADILEARRPKVEALLSTRQSFI-KAIKYT--------------DELIIIITKPNRGYEYFTTPRSERLLIKKYESICIGQPLTEGPLNPHTLLHIYFHYFYSLGTLSIYESAYRSLKKLQIFLLMSVQDIYMSQGVIISGKHVELIVREMTHKVYIEYPGKTTFLPGDIIDLDQAQYINQSLKTRYKLGFRPILLGITKSSLKTDGFLAAASFQETTRVLTHAALQGKTDWLRGLKENAITGRLIPAGTGFYLDQDITYNKILLPNRLINKKNNLNLKKQLRSKQKQFKNLIKFKY 1272          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: D1J789_ECTSI (DNA-directed RNA polymerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J789_ECTSI)

HSP 1 Score: 1107 bits (2864), Expect = 0.000e+0
Identity = 593/1287 (46.08%), Postives = 832/1287 (64.65%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDI--LFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEK----QNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN-----------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSN--IFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMP--TLNNNHNSNIKNDDQTKHHKLRSAIKFRY 1266
            M+++SN+F NN +NKKELK II WAFKN+G  KAAY VD+LK++GF+YATK+GISIS+EDL+IPP K +L+R A  +    E +   GEI+EVER Q++I IWN TSE LKER+I++F++ DPLNSVYIMAFSGARGNI+QVRQLVGMRGLMSDP+G+IID  I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++E ++D D      L E + GRVLA +I  P TK IIA++N+ IT  L E ++K N   ++VRSPLTCECRR++CQ CYG NLA GNLVELGE VG+IAAQSIGEPGTQLTMRTFHTGGVFTS+  RQ R   SGY+ F S L     RT YG+  L+ EN S++ +ITY N+I  + I   +II   N+ ++  N +L E  PK K M      +  V A+  G+I +E+    Q+F  QN     RK    +   W+LSG V    F T ++   L  I K+Q++ QSKI     G+++F +N +T +++  K  ++       KI +ES   +I+ CK+YL+    I L P  ++K + + G L   KYKTKTGGNFY +N           + + + GS++FY+P++T     +    K   G YV K  EI+ +YFI I G I FD      + I IKPG        L    + + QI+YPGE+I D FE+   SYIE  S     FL +RP+ RYE  N         N+F P  + ++   + +IS  +IK + PI FI+    I++  +  +  + FE  +  + ++      I     + + ++PKE+ K ++ ++L +++KQF +  T++ +FD + PF  T+L IKK+    + +ILLTT+ DY+ IF++    Q +  +  K  K    +   +E  L++++ GNK+   +   Y FS GA +R   GD I+ ++ LGQL++ERLITGDIVQGLP++  ILEAR PK+E+ ++  PG I  +     +  I I  K S       I+        S  L++RK++ V+V Q LT+G+LNPHT+L VYF+Y+CS+ +LS Y+++Y S KK+Q  LL SVQA+Y SQGV I+ KH+E+I+++MT+++ +  PG TNFL GD+++LEQ +YIN C+    ++ F+PILLGITKS+LK + FL+AASFQ TTRVLT A+I+G+ DW+ GLKEN I G+LIP GTGFY N D ++ KV +P  + N   N  +K   + K  KL+  ++F+Y
Sbjct:    1 MLKRSNIFSNNTINKKELKKIIEWAFKNYGQRKAAYFVDQLKEMGFEYATKSGISISIEDLRIPPVKIDLMRRASFDAFLTEAQAKNGEITEVERFQRIIYIWNTTSEELKERLIEFFKKTDPLNSVYIMAFSGARGNIAQVRQLVGMRGLMSDPSGRIIDRAIGANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTERGIFLQESVKDKDEKGFLPLTELLNGRVLASSIFKPGTKKIIAFRNQEITSSLVENLIKANITKVLVRSPLTCECRRAVCQHCYGWNLALGNLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTSELIRQGRVNYSGYLDFMSELKLCPYRTEYGQAALLSENNSWLGIITYENKIIRLPIPEDTIIFSKNHKYITDNQVLLEAAPKMKEMTLGEKEIKYVNARHPGQIFLEENSCPQDFLTQN-IAEFRKRGQKNYSFWVLSGEVLPTAFDTIIRARILEKIYKDQSIAQSKIVTTIGGFVRFSRNKSTQELLGLKTQNTTREQSIFKIFIESNHIEISNCKVYLSHTYQIILKPQLINKRLFSFGSLCNNKYKTKTGGNFYISNLYKPRPIGKKLNNKVKSGSTIFYLPKATIRTGSNEKEFKFKKGSYVKKHDEIFPDYFISINGFINFD-IAAQTKSITIKPGEKHRVDKELKFYTDLNEQIYYPGELILDKFEVTVLSYIEFESNAGKTFLYIRPITRYEFTNEYPRQILNSNYFAPLNLIVEDFKVQIISGQEIKIDKPIQFIESPLIIDYSLDLDDTELVFEFKKPEKKNSPSKINFIYSQICLFDTVIPKEIKKTDIEVNLLVEEKQFTDPYTIIGAFDTLSPFNNTILSIKKKCNRVRSEILLTTKTDYREIFLDSFSHQYEEKKFFKTNKLFNNDIIIREDGLLKEVKGNKLVLHLGQSYFFSNGALVRKIPGDYIRRQETLGQLIFERLITGDIVQGLPKINNILEARKPKIESLLSTRPGFINSI--RYTSNFIVIGTKPS-------IKNDYYKASRSQRLVVRKYESVSVGQPLTQGSLNPHTLLHVYFRYFCSLGLLSTYESAYRSLKKLQGLLLTSVQAIYVSQGVMISSKHVELIVREMTHKVYVESPGKTNFLPGDIIDLEQAQYINLCIKNNNQLGFRPILLGITKSSLKTDSFLAAASFQETTRVLTGAAIQGKTDWLRGLKENAITGRLIPAGTGFYINKDITFTKVLVPEKSANEEQNLTLKAQLKVKEAKLKKLVRFKY 1276          
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A1I9LV94_9PHAE (DNA-directed RNA polymerase n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LV94_9PHAE)

HSP 1 Score: 1107 bits (2862), Expect = 0.000e+0
Identity = 595/1288 (46.20%), Postives = 836/1288 (64.91%), Query Frame = 0
Query:    1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDI--LFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNF---FNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN-----------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNN--LFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFIN-FLE-NYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 1266
            M+++SN+F NN +NKKELK II WAF N+G  KAAY VD+LK+IGF+YATK+GISIS+EDLK+PP K  L++ A ++ +  E +   GEI+EVER Q++I IWN TSE LKER+I++F++ DPLNSVYIMAFSGARGNISQVRQLVGMRGLM DP+G+IID  I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDCR+QRG+ ++E I+D D     SL E + GRVLA +I +P TK IIA++N+ IT  L E ++K+    I+VRSPLTCECRR++CQ CYG NLA GNLVELGE VG+IAAQSIGEPGTQLTMRTFHTGGVFT +  RQ R    GY+ F S +  R  RT YG+D L+ EN+S+I +ITY N I  + I   +II   N+ +V  N +L E  PK + M      +  V A  SG+I +EK      +N+   +  RK +  +   W+LSG V  I F T ++   L  I K Q++ QSKI     G+IKF K  +T +I+  K+ + +      KI +ES   +++ CKIYL+    I L P  ++K + + G L    YKTKTGG+FY +N           + + + GS++FY+PE+T   +      K   G YV K  EI+ + F+ I G I F+  +P  + I IKPG         I   + + QI+YPGE I D FE+   SY+E+    NN   +L +RP+ RYE  N   F     N F P  + ++   + +IS  KIK + PI FI     ++ F++ + + + FE+ +  + ++ GY + I     + + ++PK + K ++  ++ +++ QF +  T++ +FD + P    +  IKK+    + ++L+TT  +Y+ IF++  +   + ++  K  K    +    E  L++++ GNKI   +   Y FS GA +R   GD I+ ++ LGQL++ERLITGDIVQGLP++  ILEAR PK+E+ ++  PG I+  I++  N +I I  K S       I+        S  LL+RK + ++V Q LT+G+LNPHT+L VYF+Y+CS+ +LS Y+A+Y S KK+Q  LL SVQA+Y SQGV I+ KH+E+II++MT ++ + YPG+TNFL GD+++L+Q +YIN C+ K  ++ F+PILLGITKS+LK + FL+AASFQ TTRVLT A+I+G+ DW+ GLKEN I G+LIP GTGFY N D +  KV +P   L    N  +K+  + K  KL+  I+F+Y
Sbjct:    1 MVKRSNIFSNNTINKKELKKIIEWAFTNYGQRKAAYFVDQLKEIGFEYATKSGISISIEDLKVPPVKIELMKRASSDAILTEAQAKNGEITEVERFQRLIYIWNSTSEELKERLIEFFKKTDPLNSVYIMAFSGARGNISQVRQLVGMRGLMCDPSGRIIDKAIAANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCRTQRGVFLQEGIDDEDEKGFLSLTELLKGRVLASSIFEPGTKKIIAFRNQQITSSLVEMLIKFKIYKILVRSPLTCECRRAVCQHCYGWNLALGNLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTGELIRQARITFCGYLDFMSEVKLRPYRTQYGEDALLAENKSWIGIITYGNNILRLSIAEDTIIFSENHQYVSNNQVLLEAAPKRREMTLGEKEIKYVNAIHSGKIFLEKNGSPQDYNKQNIVKFRKRSKRNYSFWVLSGNVLSIGFETVIRARILEKIYKEQSIAQSKIVTTIGGFIKFFKTKSTQEILGLKIQNYIDGKSIFKIFIESTHIEVSNCKIYLSHIHQIILKPQIINKQLFSFGYLCNNNYKTKTGGSFYISNLYKPRPLVNKLNNKLKSGSTIFYLPEATIQTDSKEKEFKFKNGGYVKKYEEIFPDCFVSIDGFINFEVEEPT-KYITIKPGQKYILDKEFIFYKDLNEQIYYPGEFILDEFEVYVLSYLELEHNHNNGETYLYVRPITRYEFTNEYPFQFLNSNSFAPLNLIVEDFKVKIISGQKIKIDKPIQFIDSRLILDCFIDLDDTELVFEVKKPNKKNSPGYIRFIYSQIFLFDNVMPKGINKTDLEFNILVEENQFTDPYTIIGTFDTLSPSNNIISSIKKKCNRIRSELLVTTTSNYREIFLDSFNNNYEEHKFFKTNKLCDNDLLIYEDGLVKEVQGNKIVLHLGQSYFFSTGALIRKIPGDYIRQQETLGQLIFERLITGDIVQGLPKINNILEARKPKIESLISTRPGFISS-IQYTTNFII-ISTKPS-------IKNDYYKANRSQRLLVRKSESISVGQPLTQGSLNPHTLLHVYFRYFCSLGVLSSYEAAYISLKKLQGLLLRSVQAIYVSQGVMISGKHVELIIREMTYKVYVEYPGNTNFLPGDIIDLDQAQYINLCIKKNNQLVFRPILLGITKSSLKTDSFLAAASFQETTRVLTGAAIQGKTDWLRGLKENAITGRLIPAGTGFYINKDATSNKVLLPQKGLKEEDNVTLKSALKLKESKLKKLIRFKY 1278          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7U3NQV8_9STRA0.000e+0100.00DNA-directed RNA polymerase subunit beta'' n=1 Tax... [more]
A0A8F0FAT1_9PHAE0.000e+047.47DNA-directed RNA polymerase n=1 Tax=Desmarestia ac... [more]
A0A8F0F804_9PHAE0.000e+047.90DNA-directed RNA polymerase n=2 Tax=Laminariales T... [more]
D1GJH4_FUCVE0.000e+047.74DNA-directed RNA polymerase subunit beta'' n=3 Tax... [more]
A0A0R6M448_UNDPI0.000e+047.33DNA-directed RNA polymerase n=32 Tax=Laminariales ... [more]
A0A8E6D2G6_9PHAE0.000e+046.45DNA-directed RNA polymerase subunit beta'' n=1 Tax... [more]
A0A8F0F9S6_9PHAE0.000e+045.94DNA-directed RNA polymerase n=1 Tax=Chorda asiatic... [more]
A0A110AQ85_9PHAE0.000e+046.17DNA-directed RNA polymerase n=15 Tax=Sargassaceae ... [more]
D1J789_ECTSI0.000e+046.08DNA-directed RNA polymerase n=2 Tax=Ectocarpus sil... [more]
A0A1I9LV94_9PHAE0.000e+046.20DNA-directed RNA polymerase n=1 Tax=Pleurocladia l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1790.20coord: 973..1174
e-value: 3.0E-44
score: 152.9
NoneNo IPR availableGENE3D2.40.50.100coord: 988..1059
e-value: 3.0E-44
score: 152.9
NoneNo IPR availableGENE3D1.10.150.390coord: 1176..1236
e-value: 3.2E-24
score: 86.2
NoneNo IPR availablePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 8..464
NoneNo IPR availablePANTHERPTHR19376:SF43coord: 612..1236
NoneNo IPR availablePANTHERPTHR19376:SF43coord: 8..464
NoneNo IPR availablePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 612..1236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 848..865
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 866..1268
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..847
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 8..1225
IPR042102RNA polymerase Rpb1, domain 3 superfamilyGENE3D1.10.274.100coord: 1..57
e-value: 3.6E-12
score: 48.8
IPR007066RNA polymerase Rpb1, domain 3PFAMPF04983RNA_pol_Rpb1_3coord: 5..61
e-value: 1.2E-7
score: 31.8
IPR007081RNA polymerase Rpb1, domain 5PFAMPF04998RNA_pol_Rpb1_5coord: 171..1174
e-value: 8.0E-55
score: 186.1
IPR012756DNA-directed RNA polymerase, subunit beta''TIGRFAMTIGR02388TIGR02388coord: 8..1226
e-value: 1.2E-301
score: 1001.4
IPR012756DNA-directed RNA polymerase, subunit beta''HAMAPMF_01324RNApol_bact_RpoC2coord: 5..1244
score: 10.711
IPR007083RNA polymerase Rpb1, domain 4PFAMPF05000RNA_pol_Rpb1_4coord: 90..159
e-value: 4.4E-14
score: 52.3
IPR038120RNA polymerase Rpb1, funnel domain superfamilyGENE3D1.10.132.30coord: 58..195
e-value: 1.4E-52
score: 179.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig110contigS-ischiensis_contig110:50684..54490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig110.2402.1mRNA_S-ischiensis_contig110.2402.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig110 50684..54490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig110.2402.1 ID=prot_S-ischiensis_contig110.2402.1|Name=mRNA_S-ischiensis_contig110.2402.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=1269bp
MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYAT
KAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVI
NIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRG
LMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGY
LTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLA
CNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSIC
QKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDF
SRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIK
EIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSG
EIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLM
NISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKII
LESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGN
FYSTNSQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNY
FIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEI
IFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDP
HQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSNIFFEINQAT
QPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLA
SFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQ
LIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGD
LIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGII
TKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNV
CQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQ
AVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYI
NACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGR
VDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTLNNNHNSNIKND
DQTKHHKLRSAIKFRYRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042102RNA_pol_Rpb1_3_sf
IPR007066RNA_pol_Rpb1_3
IPR007081RNA_pol_Rpb1_5
IPR012756DNA-dir_RpoC2_beta_pp
IPR007083RNA_pol_Rpb1_4
IPR038120Rpb1_funnel_sf