prot_S-ischiensis_contig110.2396.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig110.2396.1
Unique Nameprot_S-ischiensis_contig110.2396.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length47
Homology
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: A0A7U3S1F0_9STRA (Probable RuBisCO transcriptional regulator n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3S1F0_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.340e-20
Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKK+
Sbjct:  151 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKE 192          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: A0A3G1IV96_9EUKA (Probable RuBisCO transcriptional regulator n=2 Tax=Glaucocystis TaxID=38258 RepID=A0A3G1IV96_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 3.180e-9
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            +GG +P EL+ +LK+TPY EDELALI PKSHPFS    I+K+
Sbjct:  151 IGGEVPIELQESLKITPYAEDELALILPKSHPFSKVDNIQKE 192          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: A0A1C9CEC5_9RHOD (Probable RuBisCO transcriptional regulator n=5 Tax=Compsopogonophyceae TaxID=930023 RepID=A0A1C9CEC5_9RHOD)

HSP 1 Score: 58.5 bits (140), Expect = 8.320e-9
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            +GG IP+EL+  L+VT Y EDELALI PKSHPFS    IKK+
Sbjct:  151 IGGEIPSELQQVLQVTSYAEDELALILPKSHPFSTSANIKKE 192          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: W0RYG2_PORPP (Probable RuBisCO transcriptional regulator n=2 Tax=Porphyridium TaxID=2791 RepID=W0RYG2_PORPP)

HSP 1 Score: 57.8 bits (138), Expect = 1.560e-8
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            +GG IP+EL+  L++T Y EDELALI PKSHPFS    IKK+
Sbjct:  151 IGGEIPSELKQILQITSYAEDELALILPKSHPFSKYQNIKKE 192          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: A0A1X9PUH9_9RHOD (Probable RuBisCO transcriptional regulator n=3 Tax=Porphyridiaceae TaxID=2799 RepID=A0A1X9PUH9_9RHOD)

HSP 1 Score: 57.4 bits (137), Expect = 2.150e-8
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            +GG IP EL+  L++T Y EDELALI PKSHPFS    IKK+
Sbjct:  151 IGGEIPLELKQTLQITSYAEDELALILPKSHPFSKMKDIKKE 192          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: A0A1Z1XBB8_9RHOD (Probable RuBisCO transcriptional regulator n=3 Tax=Compsopogonales TaxID=930024 RepID=A0A1Z1XBB8_9RHOD)

HSP 1 Score: 57.4 bits (137), Expect = 2.170e-8
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            +GG IP+EL+  L+VT Y EDELALI PKSHPFS    IKK+
Sbjct:  153 IGGEIPSELKEVLQVTSYAEDELALILPKSHPFSQFKDIKKE 194          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: A0A0H4T2U9_9CRYP (Probable RuBisCO transcriptional regulator n=1 Tax=Teleaulax amphioxeia TaxID=77931 RepID=A0A0H4T2U9_9CRYP)

HSP 1 Score: 57.0 bits (136), Expect = 2.930e-8
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            +GG +P EL+N L++TPY EDELALI PK HPFS    I+K+
Sbjct:  151 IGGKVPPELDNVLQITPYAEDELALILPKLHPFSKLEYIQKE 192          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: RBCR_CYAPA (Probable RuBisCO transcriptional regulator n=4 Tax=Cyanophora TaxID=2761 RepID=RBCR_CYAPA)

HSP 1 Score: 57.0 bits (136), Expect = 3.000e-8
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            +GG +P+EL+ +L +TPY EDEL LI PKSHPF+    I+K+
Sbjct:  153 IGGEVPHELQESLTITPYAEDELVLILPKSHPFAKLESIQKE 194          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: A0A3G1IW68_9EUKA (Probable RuBisCO transcriptional regulator n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A3G1IW68_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 3.070e-8
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKK 42
            +GG +P E    LK+TPY EDELALI PKSHPFS    I+K+
Sbjct:  182 IGGEVPLEFHEKLKITPYAEDELALILPKSHPFSKVETIQKQ 223          
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Match: B2XTB6_HETAK (Probable RuBisCO transcriptional regulator n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTB6_HETAK)

HSP 1 Score: 56.6 bits (135), Expect = 3.900e-8
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKK 41
            +GG IP EL + LK+TPY EDELALI PKSH FS   +IKK
Sbjct:  151 IGGAIPYELNDILKITPYAEDELALILPKSHSFSEVTKIKK 191          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7U3S1F0_9STRA1.340e-2097.62Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A3G1IV96_9EUKA3.180e-961.90Probable RuBisCO transcriptional regulator n=2 Tax... [more]
A0A1C9CEC5_9RHOD8.320e-964.29Probable RuBisCO transcriptional regulator n=5 Tax... [more]
W0RYG2_PORPP1.560e-861.90Probable RuBisCO transcriptional regulator n=2 Tax... [more]
A0A1X9PUH9_9RHOD2.150e-861.90Probable RuBisCO transcriptional regulator n=3 Tax... [more]
A0A1Z1XBB8_9RHOD2.170e-864.29Probable RuBisCO transcriptional regulator n=3 Tax... [more]
A0A0H4T2U9_9CRYP2.930e-859.52Probable RuBisCO transcriptional regulator n=1 Tax... [more]
RBCR_CYAPA3.000e-854.76Probable RuBisCO transcriptional regulator n=4 Tax... [more]
A0A3G1IW68_9EUKA3.070e-859.52Probable RuBisCO transcriptional regulator n=1 Tax... [more]
B2XTB6_HETAK3.900e-865.85Probable RuBisCO transcriptional regulator n=2 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig110contigS-ischiensis_contig110:21802..21942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig110.2396.1mRNA_S-ischiensis_contig110.2396.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig110 21747..22123 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig110.2396.1 ID=prot_S-ischiensis_contig110.2396.1|Name=mRNA_S-ischiensis_contig110.2396.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=47bp
MGGHIPNELENNLKVTPYVEDELALIFPKSHPFSNRYQIKKKICMT*
back to top