prot_S-ischiensis_contig11.2271.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2271.1
Unique Nameprot_S-ischiensis_contig11.2271.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length250
Homology
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 2.610e-78
Identity = 132/245 (53.88%), Postives = 173/245 (70.61%), Query Frame = 0
Query:    2 GDVKYWDGNYGKTLDDLEGHVSAAERGSGEQRDDSIGAATQTVRRLQGIKRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQKLDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYVVVDNVGLPGSEPSTPPDP 246
            GDVKYWD +YGKTLD L+G ++  E GSG+ R+D++  A+++++RL G++RSYNLEIKL++DP  K HY   K++KD R   L +R +AAK +    R ELF GR +                    + E KL +AD+ QDKTEAAY+NMI VL ++EA A +TA EL +QR+Q+ R+TEDV EIDSLL RAD+LVKVFSKRMMTDKFIQCFGCLNV  +V+I++YVVV  V LPG + +  PDP
Sbjct:    4 GDVKYWDTSYGKTLDQLDGFIATMESGSGDAREDAMSEASRSLKRLAGMRRSYNLEIKLIKDPNMKAHYNLEKSQKDSRYATLQSRFDAAKASGDSTRDELFGGRRDVESGEAQGK-----------SAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDP 237          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A835Z1V1_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V1_9STRA)

HSP 1 Score: 213 bits (542), Expect = 8.480e-66
Identity = 123/240 (51.25%), Postives = 158/240 (65.83%), Query Frame = 0
Query:    1 MGDVKYWDGNYGKTLDDLEGHVSAAERGSGEQRDDSIGAATQTVRRLQGIKRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQ-RSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQKLDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYVVVDNVGLPGSE 239
            MGDVKYWD +YGK LD+L   V A +  S  +++  I  ATQTVRRLQG+KRSYNLEIKLMRD   K  Y   K  KD +L EL A+LE AK   +G  +  LFSGR                      T +QKLDQA+ IQ+KTEA Y+N+I VL  +E V + TA  L++QR QI+ +TE+V+E+D +L RA+KL+ VFS+R+ TDK IQCF  +NV  LV+I++YVV+ NVGLPGS 
Sbjct:    1 MGDVKYWDTSYGKALDELSDQVKAVKGASAAEKEAKIATATQTVRRLQGMKRSYNLEIKLMRDATQKASYQEEKNAKDAKLTELEAQLEEAKNKPAGSDKVSLFSGRAAEEPKVK--------------TADQKLDQAEIIQNKTEAKYKNIITVLEQTEEVGSATAATLQEQRAQISEITENVMEMDGMLTRANKLIMVFSRRLATDKMIQCFAFINVAALVAIIVYVVIKNVGLPGSS 226          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A835Z325_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z325_9STRA)

HSP 1 Score: 190 bits (483), Expect = 6.500e-57
Identity = 120/248 (48.39%), Postives = 145/248 (58.47%), Query Frame = 0
Query:    1 MGDVKYWDGNYGKTLDDLEGHV-SAAERGSGEQRDDSIGAATQTVRRLQGIKRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAA--KGADSGQRSELFSGRT-EAAGAXXXXXXXXXXXXXGRPTPEQKLDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYVVVDNVGLPGSEPSTPP 244
            MGD+++WDGNYG  LD LE  +    E  +   RD     A  TVRRLQGIKRSYNLEIKL RD   K  Y +AKA KD RLE+L A+LE A  K     +R+ LF GR  E A                 P  + KLDQA  IQDKTEA Y+NM+ VL  +E +    A  L DQR Q+  + EDV  +   L RA KL+ VF KR+ TDKFIQCFG +NV +LV I++YVV+   GL  S  S PP
Sbjct:    1 MGDLQFWDGNYGNVLDGLESQLHQVREAYTPSDRDQLASTAASTVRRLQGIKRSYNLEIKLTRDTGLKAMYTDAKAAKDARLEQLEAQLEEARRKPGREAERAALFDGRAIEMA-----------------PAADAKLDQASAIQDKTEARYKNMVTVLAQTEEIGTAAAASLADQRTQMVAIDEDVKVMHENLTRAGKLLHVFGKRLATDKFIQCFGFVNVALLVGIILYVVITKTGLSSSGASNPP 231          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A7S4A3K9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3K9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 5.790e-28
Identity = 80/228 (35.09%), Postives = 121/228 (53.07%), Query Frame = 0
Query:    3 DVKYWDGNYGKTLDDLEGHVSAAERGSGEQRDDSIGAATQTVRRLQGIKRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQKLDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYVVV 230
            D+ YW  +Y  ++DD +  V++      ++R   I AA   ++R  GIK+SY LE++L+RD   K +Y  +  E D R +EL  R+E  +  +  +RS L      A G                   +  LD+A  +QDKTE   +   Q++  S+ V A T  EL  Q+DQI  V+ D++ I+  L RAD+L++ F+KRMMTDK I  F  LN+  L  I++Y VV
Sbjct:   62 DIDYWSDSYRSSIDDADRLVTSLGACEPDERLSIIDAADAKLKRAGGIKKSYKLELRLLRDRELKRNYEESLRELDDRRDELKRRVEEHR--ERTERSTLLQETPAAFGEHKGN--------------DYYLDKAHSLQDKTENTLERTTQMIEASKEVGASTLSELERQQDQIKDVSADIMLIEDNLSRADRLIRNFTKRMMTDKLIMGFAFLNMCALTGIIVYCVV 273          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A7S1FMQ8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMQ8_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.360e-27
Identity = 81/236 (34.32%), Postives = 123/236 (52.12%), Query Frame = 0
Query:    1 MGDVKYWDGNYGK---TLDDLEGHVSAAERGSGEQRDDSIGAATQTVRRLQGIKRSYNLEIKLMRD-PATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQKLDQ----ADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYV 228
            MGD++YW  ++     TL ++   +    +        +I  A   +++   I++SY LE++LM   P  K  Y N   E +  L E   +L+ AK     QRSEL SG                      P PE+  DQ    A +IQDKT+ +      ++ +S+ V   T +EL  QR+QI RVT+DV+ I+  L RA+KL+K F +RM TDKFIQCF C+N+L+L+ +V ++
Sbjct:    1 MGDIEYWRDSFQSELSTLPEIIRDIDRVRKKGPYAIQSAIRNAEDQLKKCSNIQKSYKLELRLMVGMPVEKKKYENDLQELENELRECNDKLDDAKA--RAQRSELMSGANNEG-----------------PDPERDGDQMLMEAGKIQDKTKESLMTTQNLIHESKEVGVTTLEELNRQRNQIVRVTDDVMAIEGELARAEKLIKTFGRRMATDKFIQCFTCVNILLLLGVVCFI 217          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A7S3PTS2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTS2_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.470e-27
Identity = 73/231 (31.60%), Postives = 120/231 (51.95%), Query Frame = 0
Query:    1 MGDVKYWDGNYGKTLDDLEGHVSAAERGSGE-QRDDSIGAATQTVRRLQGIKRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQKLDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYVVV 230
            M D++YW       ++ +   V  A+  S + +R  S+  A + +R  +   RS+ +EI+L+ D   +  Y       +  + +L A ++  +    G RS+LF G     G                   +  LD A R+QDKT  +  N  Q++ DS+ VA+ T + L+ QR+QI  +  DV+ +   L RADKL+K F KRM TDK IQCF C+N++++V +V+Y+V+
Sbjct:    1 MADIQYWKDAIVGEIETVRNLVQVAQNTSDDLERSASLEKAEKGLRSTKSNTRSFKMEIRLVFDHNERSKYERELTNFEQSISQLTAEIKNLR--SGGARSQLFMGANAGEGTSLNEDPVAAG--------DAVLDGASRLQDKTGQSLGNTKQMIADSKMVASSTVEALKQQREQITNIEGDVLRVKDNLNRADKLIKNFGKRMATDKLIQCFACVNIMLVVGVVLYLVI 221          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: B8BZJ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ7_THAPS)

HSP 1 Score: 111 bits (277), Expect = 3.500e-26
Identity = 73/204 (35.78%), Postives = 103/204 (50.49%), Query Frame = 0
Query:   36 SIGAATQTVRRLQGIKRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQKLDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYVVVDNVGLPGSE 239
            ++  A + +R   G K+SY +E +L+ DP  K  Y N  +     L      L+A KG    QR ELF G    A               G    +  L   + IQDKT+ +  N   ++  S+ V   T +EL  QR+QI  V  + + I+  L RADKL+K F KRM TD+FIQCF C+N+L+LV +VIY ++    L G E
Sbjct:    6 TLDRAEKKLRAANGTKKSYKMETRLVADPNQKRMYENKLSRLSEELSSCANDLKAMKGGM--QRGELFVG----ARGKSSRGGGEYGEMSGEEAGDSMLSDMNNIQDKTKNSLANTKHMVAASKEVGEATMEELLRQREQIRNVDNEAMRIEDNLQRADKLIKTFGKRMATDRFIQCFACINILLLVGVVIYTILKKGSLTGGE 203          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A7S0G6V6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G6V6_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 6.480e-21
Identity = 62/174 (35.63%), Postives = 98/174 (56.32%), Query Frame = 0
Query:   56 LEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQK--LDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIY 227
            +E +L+ DP+T+  Y N  A+ +  ++ L   + A     +  + ELF G T                  G  T +    L +A ++QDKT  +  N  +++ +S+ V  +T +ELR QRDQ+N + E+ ++I+  L RAD+L+K F +RM TDKFIQCF  +NVL+LV +VIY
Sbjct:    1 METRLVSDPSTRRQYENKLAQHEDTIQSLKTDMVALSAEIN--KDELFIGATN------------DLEGGGNATTDGDALLGEASKLQDKTSDSLGNTKRMIEESKNVGMETMEELRRQRDQLNTIDEEAMKIEDNLVRADRLIKTFGRRMATDKFIQCFAVVNVLLLVGVVIY 160          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A7S2P5B9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P5B9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 6.710e-20
Identity = 65/236 (27.54%), Postives = 115/236 (48.73%), Query Frame = 0
Query:    1 MGDVKYWDGNYGKTLDDLEGHVSAAERGSGEQRDDSIGAATQTVRRLQGIKRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQK----LDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYVVVDN 232
            M D++YW+    + ++DL   +      +G ++      A + +R   G KRSY LE++++++   +  Y     + + +L+ L   L+  K   S  +  L  G                    GR TPEQ+    +++A   QDKT+ +     Q++ +S+ +  +T   L +QR QI R+          LGRAD L+K FSKRM  DKFIQC  C+N+ + + ++++++  N
Sbjct:    1 MADIEYWEETLKEEIEDLSTVLGLVVAQTGSKQKQKFDEADKKLRDANGTKRSYKLEMRVIKNATQRKMYEKQLKDHETKLKALADHLKNLK--SSATKDTLLEGADT-----------------GR-TPEQEGDAMMNEARNTQDKTQTSLDRTKQLVAESKDIGQNTLATLEEQRAQIERIDAHADRTMENLGRADLLIKNFSKRMANDKFIQCCACINISLFIGVILFLIFKN 216          
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Match: A0A1E7F711_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F711_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.320e-19
Identity = 72/248 (29.03%), Postives = 120/248 (48.39%), Query Frame = 0
Query:    1 MGDVKYWDGNYGKTLDDLEGHVSAAERGSGEQRD--DSIGAATQTVRRLQGIKRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRSELFSGRTEAAGAXXXXXXXXXXXXXGRPTPEQKLDQADRIQDKTEAAYQNMIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVFSKRMMTDKFIQCFGCLNVLVLVSIVIYVVVDNVGLPGSEPSTPPDP 246
            M D++YW+    + ++ +E H+    +   +  D   ++  A   +R   G KRS+ +EI+L++D   +  Y+      +  L  L A L+A +  +   R ELF      +G              G       L++A  +QDKT+ A  N   ++  ++ V   T +EL+ QRD +  + ++   +   L RA+ LVK F KRM +DKFIQCF  LNVL+ V +V++ +    G  G+    P DP
Sbjct:    1 MADIQYWEDTLTEEIELIE-HILDGIQSLSDPVDKASALEEADDKMRSATGTKRSFKMEIRLVQDTNQRSKYSKRLKNMENELRTLKADLKALQAEE--HRGELF-----ISGGASGPDGEQDPTMAGN----NMLNEASTVQDKTQDALGNTKAMIAQTKEVGVATLEELQRQRDVLQNIDKEADRMGDNLARAEALVKQFGKRMASDKFIQCFAVLNVLLFVGVVVWAIFKGRGGEGNA-DAPADP 235          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVH9_9PHAE2.610e-7853.88t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z1V1_9STRA8.480e-6651.25Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A835Z325_9STRA6.500e-5748.39Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S4A3K9_9STRA5.790e-2835.09Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S1FMQ8_9STRA2.360e-2734.32Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3PTS2_9STRA3.470e-2731.60Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8BZJ7_THAPS3.500e-2635.78Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0G6V6_9STRA6.480e-2135.63Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2P5B9_9STRA6.710e-2027.54Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1E7F711_9STRA1.320e-1929.03t-SNARE coiled-coil homology domain-containing pro... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
NoneNo IPR availableGENE3D1.20.5.110coord: 131..208
e-value: 3.0E-13
score: 51.8
NoneNo IPR availablePANTHERPTHR21230:SF69coord: 14..232
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 14..232
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 231..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..208
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 130..198
NoneNo IPR availableTMHMMTMhelixcoord: 213..235
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 133..200
e-value: 0.0095
score: 25.1
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 138..200
score: 9.332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:2434979..2440020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2271.1mRNA_S-ischiensis_contig11.2271.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 2434277..2440023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2271.1 ID=prot_S-ischiensis_contig11.2271.1|Name=mRNA_S-ischiensis_contig11.2271.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=250bp
MGDVKYWDGNYGKTLDDLEGHVSAAERGSGEQRDDSIGAATQTVRRLQGI
KRSYNLEIKLMRDPATKGHYANAKAEKDGRLEELVARLEAAKGADSGQRS
ELFSGRTEAAGAGGAAAAAAAAGAGGRPTPEQKLDQADRIQDKTEAAYQN
MIQVLGDSEAVAADTAQELRDQRDQINRVTEDVIEIDSLLGRADKLVKVF
SKRMMTDKFIQCFGCLNVLVLVSIVIYVVVDNVGLPGSEPSTPPDPTTV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom