prot_S-ischiensis_contig11.2160.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig11.2160.1
Unique Name	prot_S-ischiensis_contig11.2160.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	261

Homology

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: D8LHV3_ECTSI (Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV3_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 8.450e-65
Identity = 111/193 (57.51%), Postives = 130/193 (67.36%), Query Frame = 0

Query:   72 AVASPFLAPFVERYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLL-----SSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLPHKE 259
            A AS F+ PFV+RYG PDLDQVILPS E+TSC+DSRTRN RWVVER+N  TV G  DR K+ F  + RL PLFRS L D+ GSG+DRGHLAPA DHKT+Q  L  TF L NM+PQVP FNR YW +FE F+R L+     S + AA+ G  T                 S + SP F+DVYVITGPL+LP KE
Sbjct:   11 APASAFIMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGDHKTTQANLTQTFLLSNMAPQVPSFNRGYWGDFEEFVRTLVVPSERSIKAAAAAGFST-----------------SSSLSPPFKDVYVITGPLFLPSKE 186

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A6H5JV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV63_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 6.400e-63
Identity = 109/193 (56.48%), Postives = 130/193 (67.36%), Query Frame = 0

Query:   72 AVASPFLAPFVERYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLL-----SSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLPHKE 259
            A AS F+ PFV+RYG PDLDQVILPS E+TSC+DSRTRN RWVVER+N  TV G  DR K+ F  + RL PLFRS L D+ GSG+DRGHLAPA +HKT+Q  L  TF L NM+PQ+P FNR YW +FE F+R L+     S + AA+ G  T                 S + SP F+DVYVITGPL+LP KE
Sbjct:   66 APASAFIMPFVKRYGYPDLDQVILPSEEYTSCWDSRTRNARWVVERINLNTVSGPGDRKKSPFRPDSRLQPLFRSSLSDFYGSGYDRGHLAPAGNHKTTQANLTQTFLLSNMAPQMPSFNRGYWGDFEEFVRTLVVPSERSIKAAAAAGFST-----------------SSSLSPPFKDVYVITGPLFLPSKE 241

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A835Z8T9_9STRA (Endonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.970e-38
Identity = 78/179 (43.58%), Postives = 103/179 (57.54%), Query Frame = 0

Query:   78 LAPFVERYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 256
            LA +   +GLP     +L   E    +DSRTR PR+VVERV+ T++ G A R K  F  E  L+P FR+ LRD++G+G DRGHLA AA+HK  QGA++DTF + N++PQ+P FNR YW + E F+RGL                                  +PQF +VYVITGPL+LP
Sbjct:   16 LAHYAHTFGLPAAQDPLLSYTEHVVKWDSRTRTPRFVVERVSSTSIAGQAAR-KEQFKEETTLEPRFRNRLRDFKGTGLDRGHLAAAANHKDDQGAMDDTFVMSNVAPQLPAFNRGYWQQLERFVRGL----------------------------------APQFDNVYVITGPLYLP 159

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A7S0NAH1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0NAH1_9CHLO)

HSP 1 Score: 143 bits (360), Expect = 1.240e-36
Identity = 74/173 (42.77%), Postives = 99/173 (57.23%), Query Frame = 0

Query:   85 YGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPD-FNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 256
            YG P + +V+   + F + FD RTRNPR+V+E +   +V G  DR K+ F  +  +DP  R++L DYRGSG+DRGHLAPAA+HK  QGA++ TF+L N+SPQV + FNR YWA FE F++ L                                    +  DVYV+TGPLWLP
Sbjct:   47 YGAP-VSEVVRTFKGFVAAFDMRTRNPRYVIEHITADSVSGDGDRGKSDFVEDPAIDPAMRAKLTDYRGSGYDRGHLAPAANHKGDQGAMDQTFTLTNISPQVGEGFNRDYWARFEKFVKDLTR----------------------------------RADDVYVVTGPLWLP 184

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: D8UF41_VOLCA (Endonuclease n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UF41_VOLCA)

HSP 1 Score: 134 bits (337), Expect = 6.440e-35
Identity = 67/174 (38.51%), Postives = 99/174 (56.90%), Query Frame = 0

Query:   84 RYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQV-PDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 256
            ++G P+ + +I     + + +D RTRNP+WV++ + R +  G A R  + F  +  +DP F ++L D+RGSG+DRGH+ PAADHK+SQ A+++TFSL+N+SPQV   FNR YWA FE F++ L  +                                    DVY++TGPLWLP
Sbjct:   48 KFGAPETE-IIRQYEGYVAAYDYRTRNPKWVLKHITRASSNGDAKREGSEFFPDPGIDPRFSAKLSDFRGSGYDRGHMTPAADHKSSQKAMDETFSLINISPQVGAGFNRDYWARFERFVKELTYAAA----------------------------------DVYIVTGPLWLP 186

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A835YH22_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YH22_9CHLO)

HSP 1 Score: 137 bits (346), Expect = 2.810e-34
Identity = 69/174 (39.66%), Postives = 99/174 (56.90%), Query Frame = 0

Query:   84 RYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQV-PDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 256
            ++GLP+ D ++ P   + + +D RTRNP+WV+E +   +  G A R ++ F  +  +DP F ++L D+RGSG+DRGH+APAA+HK SQ A+++TFSL+N+SPQ    FNR YWA FE F++ L                                       DVYV+TGPLWLP
Sbjct:   45 KHGLPETD-IVRPYEGYVAAYDYRTRNPKWVLEHITPASWSGEASRDRSEFFPDPGVDPRFSAQLSDFRGSGYDRGHMAPAANHKVSQKAMDETFSLVNISPQAGKGFNRDYWARFERFVKELTDVAG----------------------------------DVYVVTGPLWLP 183

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A7K4M4L4_9AVES (Endonuclease (Fragment) n=1 Tax=Crypturellus undulatus TaxID=48396 RepID=A0A7K4M4L4_9AVES)

HSP 1 Score: 129 bits (325), Expect = 5.130e-34
Identity = 76/193 (39.38%), Postives = 105/193 (54.40%), Query Frame = 0

Query:   65 SAAMPAPAVASPFLAPFVERYGLPDLDQVILPSRE-FTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 256
            +AA+P P  A    +  + +YGLP L Q  L SRE +  C+D R+R+  WV+ER+NR T+ GA++RA   F  +G +    R+   DYRGSGFDRGHLA AA+HK SQ A++DTF L N++PQVP  N++ W   E + R L  +                                   ++VYV TGPL+LP
Sbjct:    4 AAALPPPQPAG---STELAKYGLPGLAQ--LRSRESYVLCYDPRSRSALWVIERLNRDTLSGASERASCDFQEDGSVHEYHRATNADYRGSGFDRGHLAAAANHKWSQKAMQDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLARNN----------------------------------KNVYVCTGPLFLP 157

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A7S0RJH0_9CHLO (Endonuclease n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RJH0_9CHLO)

HSP 1 Score: 134 bits (338), Expect = 1.060e-33
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = 0

Query:   84 RYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPD-FNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLPHK 258
            +YGLP + Q +   ++F S FDSRTRNP+WV+ERVNR T  G  +RA + F  +  +    R+ L D++ SG+DRGHLAPAA+H+ SQ AL++TF+L N+SPQV + FNR YWA  E F+R L                                    +  DVYV+TGPL+LP +
Sbjct:   48 KYGLP-VGQNLRIYKQFVSSFDSRTRNPQWVLERVNRDTAFGEGNRADSKFIEDNAIPARLRNRLDDFKHSGYDRGHLAPAANHRGSQEALDETFTLSNISPQVGNGFNRAYWARVEKFVRDLTK----------------------------------ECSDVYVVTGPLYLPTR 188

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A8J4B6C2_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B6C2_9CHLO)

HSP 1 Score: 137 bits (344), Expect = 1.460e-33
Identity = 69/174 (39.66%), Postives = 101/174 (58.05%), Query Frame = 0

Query:   84 RYGLPDLDQVILPSREFTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQV-PDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLP 256
            ++G P+ + ++     + + +D RTRNP+WV+E + +++  G A R    F  +  +DP F ++L D+RGSG+DRGH+APAADHK+SQ A+++TFSL+N+SPQV   FNR YWA FE F+R L ++                                    DVY+ITGPLWLP
Sbjct:  141 KFGAPETE-IVRQYEGYIAAYDYRTRNPKWVLEHITQSSSNGDAKRDGTDFFPDPGVDPRFSAKLSDFRGSGYDRGHMAPAADHKSSQKAMDETFSLINISPQVGAGFNRDYWARFERFVRELTNAAA----------------------------------DVYIITGPLWLP 279

[Close]

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Match: A0A7K8MZG4_CASCA (Endonuclease (Fragment) n=3 Tax=Casuariiformes TaxID=8784 RepID=A0A7K8MZG4_CASCA)

HSP 1 Score: 130 bits (326), Expect = 2.920e-33
Identity = 72/177 (40.68%), Postives = 97/177 (54.80%), Query Frame = 0

Query:   84 RYGLPDLDQVILPSRE-FTSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRDYRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEAFLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVITGPLWLPHKE 259
            +YGLP L Q  L SRE +  C+D R+R+  WV+ER+NR T+ GA+DRA   F  +G +    R+   DYRGSGFDRGHLA AA+H+ SQ A++DTF L N++PQVP  N++ W   E + R L  +                                   ++VYV TGPL+LP  E
Sbjct:    1 KYGLPGLAQ--LRSRESYVLCYDPRSRSALWVIERLNRDTLRGASDRAACDFQEDGSVHEYHRATNADYRGSGFDRGHLAAAANHRWSQKAMQDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLARNN----------------------------------KNVYVCTGPLFLPRME 141

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig11.2160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LHV3_ECTSI	8.450e-65	57.51	Endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=...	[more]
A0A6H5JV63_9PHAE	6.400e-63	56.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z8T9_9STRA	4.970e-38	43.58	Endonuclease n=1 Tax=Tribonema minus TaxID=303371 ...	[more]
A0A7S0NAH1_9CHLO	1.240e-36	42.77	Hypothetical protein (Fragment) n=1 Tax=Chlamydomo...	[more]
D8UF41_VOLCA	6.440e-35	38.51	Endonuclease n=1 Tax=Volvox carteri f. nagariensis...	[more]
A0A835YH22_9CHLO	2.810e-34	39.66	Uncharacterized protein n=1 Tax=Edaphochlamys deba...	[more]
A0A7K4M4L4_9AVES	5.130e-34	39.38	Endonuclease (Fragment) n=1 Tax=Crypturellus undul...	[more]
A0A7S0RJH0_9CHLO	1.060e-33	42.05	Endonuclease n=1 Tax=Pyramimonas obovata TaxID=141...	[more]
A0A8J4B6C2_9CHLO	1.460e-33	39.66	Uncharacterized protein n=1 Tax=Volvox africanus T...	[more]
A0A7K8MZG4_CASCA	2.920e-33	40.68	Endonuclease (Fragment) n=3 Tax=Casuariiformes Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001604	DNA/RNA non-specific endonuclease	SMART	SM00892	Endonuclease_NS_2	coord: 96..258 e-value: 1.2E-16 score: 71.3
IPR001604	DNA/RNA non-specific endonuclease	PFAM	PF01223	Endonuclease_NS	coord: 90..258 e-value: 1.4E-34 score: 119.8
IPR020821	Extracellular Endonuclease, subunit A	SMART	SM00477	endoplus	coord: 97..261 e-value: 6.5E-18 score: 75.5
IPR040255	Non-specific endonuclease	PANTHER	PTHR13966	ENDONUCLEASE RELATED	coord: 35..259
None	No IPR available	PANTHER	PTHR13966:SF5	ENDONUCLEASE G, MITOCHONDRIAL	coord: 35..259
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..261
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.489
None	No IPR available	SUPERFAMILY	54060	His-Me finger endonucleases	coord: 84..257
None	No IPR available	TMHMM	TMhelix		coord: 4..26
IPR018524	DNA/RNA non-specific endonuclease, active site	PROSITE	PS01070	NUCLEASE_NON_SPEC	coord: 157..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig11	contig	S-ischiensis_contig11:1697904..1702667 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig11.2160.1	mRNA_S-ischiensis_contig11.2160.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig11 1697904..1702667 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig11.2160.1 ID=prot_S-ischiensis_contig11.2160.1|Name=mRNA_S-ischiensis_contig11.2160.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=261bp
MGLGSVASLAASAAVGAAAGAIAATYCVTRQRDKERGEGKATETPRAAPA
PWLPPRDKGFPSEVSAAMPAPAVASPFLAPFVERYGLPDLDQVILPSREF
TSCFDSRTRNPRWVVERVNRTTVGGAADRAKASFHAEGRLDPLFRSELRD
YRGSGFDRGHLAPAADHKTSQGALEDTFSLMNMSPQVPDFNRHYWAEFEA
FLRGLLSSEPAASPGTGTGARAGLGDRGRAGAPGRSPAASPQFRDVYVIT
GPLWLPHKEWV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001604	DNA/RNA_non-sp_Endonuclease
IPR020821	Extracellular_endonuc_su_A
IPR040255	Non-specific_endonuclease
IPR018524	DNA/RNA_endonuclease_AS