prot_S-ischiensis_contig11.2114.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2114.1
Unique Nameprot_S-ischiensis_contig11.2114.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length171
Homology
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 5.400e-72
Identity = 118/167 (70.66%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    5 YMRGANMILCLLLWATAVIQLVGTP-DLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQFAQNNPEVARKAAAAAASTYV 170
            YMR AN+ LC +L ATAV++L+G   D+  AVLACY+ AFSCILCCFETHLK VAKTIAANFGFLYNAKGRA+FL+FVG+LCFS  +   + F+ G  M+ NA+FNFYVIFKYPE E++ QRKDLESEGRD+LRAN+GA+AQAGV+FA+NNP++ARK A AAASTYV
Sbjct:   57 YMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSD--IAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 221          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA)

HSP 1 Score: 200 bits (509), Expect = 4.670e-63
Identity = 108/164 (65.85%), Postives = 135/164 (82.32%), Query Frame = 0
Query:    7 RGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQFAQNNPEVARKAAAAAASTYV 170
            R  NM LC+LL ATAV++L+G P+    VLA Y+FAF+CILCCFETH+  +A   A+NFGFLYNAKGRA+FL+FVG+LCFSFG+  ILG+I+G+AMIA+++FNF+VI KYPE+ QNQQRKDLES  RDF+R NQGA+A+ GV FAQNNP+ A  AAA  AST+V
Sbjct:    6 RLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGS--ILGYISGIAMIADSIFNFFVILKYPEV-QNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAA-AAARTASTFV 165          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH)

HSP 1 Score: 126 bits (317), Expect = 1.060e-33
Identity = 68/148 (45.95%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   20 TAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQ-------AGVQFAQNNPEVARK 160
            T+++ ++ T      VLACYV  FSC+LCCFETHLK V+K IA NFGF+Y+AK R++F++F+G + FSF    + G I GL M+ANA FN + +F+YP+ E + QRKD +SE +D+L +N     Q       A  +  + NPE+AR+
Sbjct:    4 TSLLAVLTTQSATTGVLACYVVVFSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSFS---LFGKIIGLCMLANAGFNLFAVFRYPQYE-DMQRKDAQSEIQDYLASNPAFAKQIVDAGLKASTEVLRQNPEIARQ 147          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.240e-33
Identity = 77/142 (54.23%), Postives = 94/142 (66.20%), Query Frame = 0
Query:    2 LIQYMRGANMILCLLLWATAVIQ-LVGTPDLPAA-VLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQG 141
            L+ YMR AN  LC+L+ A AV+  +V     PA+ VLA YV AFSC+LCCFE +L+ VAK IA NFGFLY+AK RA FL+FVG+LCFS G T   G + G AMIANALFN  V+ KYP+   N      E E   F++ N G
Sbjct:   82 LVIYMRVANFALCILMSAAAVLTVIVPAGATPASWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLGIT---GKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG 220          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A7S2WC07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC07_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.620e-25
Identity = 68/169 (40.24%), Postives = 95/169 (56.21%), Query Frame = 0
Query:    5 YMRGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRD------------FLRANQ---GAMAQAGVQFAQNNPEVA 158
            YMR AN+ + +L+   A+   + +  L  AV+A Y+  F C++CCFETHLK V+  IA NFGF+YNAKGR IF++ +  LC +     + G ITG  M   AL+N YVI  +PE     Q  D + E  +            +++ N     A+A AG Q+A NNPEVA
Sbjct:   94 YMRLANVAVAVLMVTAALTTFITSSSLSTAVIALYISCFGCLVCCFETHLKQVSIIIADNFGFMYNAKGRFIFMILMATLCMTLN---VFGQITGGLMYGVALYNLYVICMHPEYGSETQELDRKGENPNSIQHVAQSYATGYVQNNPDQVAAVASAGAQWAYNNPEVA 259          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A7S2MMX0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMX0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.160e-24
Identity = 62/164 (37.80%), Postives = 93/164 (56.71%), Query Frame = 0
Query:    2 LIQYMRGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQFAQNNPEVARKAAAAA 165
            LI YMR AN+ L  L+  +AV   + +  L   ++  YV  F C+ CC+ETHLK V+  IA NFGFLYNAK R +F++ +  LC++     I+G IT    +A    N YV+FK+P  +   +  DL  +G + +   Q   +Q  V +A+ NP+  + AA +A
Sbjct:   90 LILYMRLANVALSALMITSAVTSALMSASLSNFIIGAYVSCFGCLFCCYETHLKQVSVFIADNFGFLYNAKARCLFMMLIATLCYTLN---IIGMITAFLCVAAVCLNVYVLFKHPHYQDQIKNDDLHGKGPETI---QDMASQYAVSYARENPDQVQAAARSA 247          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.460e-21
Identity = 66/141 (46.81%), Postives = 83/141 (58.87%), Query Frame = 0
Query:    2 LIQYMRGANMILCLLLWATAVIQLVGTPDLPA-AVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQG 141
            L+ YMR AN  LC+L+ A AV+ ++    +PA A  A +V AF  +          VAK IA NFGFLY+AK RA FL+FVG+LCFS G T   G + G AMIANALFN  V+ KYP+   N      E E   F++ N G
Sbjct:   82 LVIYMRVANFALCILMSAAAVLTVI----VPAGATPASWVLAFYVL----------VAKHIANNFGFLYDAKSRATFLIFVGVLCFSLGIT---GKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG 205          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A485L7T0_9STRA (Aste57867_16065 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7T0_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.090e-16
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 0
Query:    2 LIQYMRGANMILCLLLWATAVIQLVG--TPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQFAQNNPEVARKA 161
            L++YMR  NM+ C+L     +  L    T ++ A  ++ YV  F  +   FE  L ++   I  NFGFLY+  GRA F+ F+G +   FGT   LG++ G+ M ANAL NFYV+FK+PE          +        A     +Q   ++ Q+NP++A +A
Sbjct:   39 LLRYMRVGNMLCCVLQILAGIGGLASIITFNITAVFVSLYVIMFGVLFLLFECRLSSLEPKIRENFGFLYSYAGRARFIFFIGFM--DFGTGGGLGYLAGVIMCANALLNFYVMFKHPEFASGNLSSASDPT------AGYAPASQEATKYLQSNPDIAMQA 192          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A7S3JYJ7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYJ7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.230e-16
Identity = 47/124 (37.90%), Postives = 75/124 (60.48%), Query Frame = 0
Query:    6 MRGANMILCLLLWATAVIQLV-GTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDL 128
            MR AN+    LL   A ++L   T D+ + V++ Y+FAF+ ++  FE H+  + K IA N GF+Y A GRA F++ +G+LCFS       G+  G+ +I  AL N +++FK+P  E++ +  DL
Sbjct:   96 MRIANLCSAFLLACLAALKLQKNTGDVSSGVISFYLFAFAILIFTFECHVSFLGKVIADNLGFMYQAPGRASFMILLGMLCFSDEPLPGFGYFVGIFVIVTALLNAFIMFKFPNYERSCRINDL 219          
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A7S2XJA4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJA4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.270e-14
Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    3 IQYMRGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYP 117
            I +MR ANM + + L A ++++++  P +   +LA Y   F  ++CC ET LK +   IA NFGFL++A  R  F + +  + +++   F  G I  +A+ A ALFN YV+F+YP
Sbjct:   52 ILFMRLANMGIAIALVACSIVKMMSFPSISNWILAVYATLFGLLICCLETQLKFLRVVIAVNFGFLFSAPWRFFFYLLLASITWAYNNLF--GKIVAIAIAATALFNTYVLFRYP 164          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LTB9_ECTSI5.400e-7270.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CFZ2_9STRA4.670e-6365.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482T2R9_9ARCH1.060e-3345.95Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
W7TT71_9STRA1.240e-3354.23Golgi apparatus membrane protein TVP15 n=1 Tax=Nan... [more]
A0A7S2WC07_9STRA1.620e-2540.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2MMX0_9STRA2.160e-2437.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D7K6_9STRA3.460e-2146.81Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A485L7T0_9STRA3.090e-1634.57Aste57867_16065 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3JYJ7_9STRA3.230e-1637.90Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S2XJA4_9STRA1.270e-1437.39Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 5..125
e-value: 2.5E-13
score: 50.2
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 2..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..170
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..74
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..19
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..21
score: 0.52
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1295661..1300429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2114.1mRNA_S-ischiensis_contig11.2114.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 1295161..1302278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2114.1 ID=prot_S-ischiensis_contig11.2114.1|Name=mRNA_S-ischiensis_contig11.2114.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=171bp
MLIQYMRGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCF
ETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGL
AMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQF
AQNNPEVARKAAAAAASTYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15