mRNA_S-ischiensis_contig11.2114.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI) HSP 1 Score: 251 bits (642), Expect = 1.340e-74 Identity = 133/186 (71.51%), Postives = 158/186 (84.95%), Query Frame = 1
Query: 76 AAPTQAELERQAKVPMLIQYMRGANMILCLLLWATAVIQLVGTP-DLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQFAQNNPEVARKAAAAAASTYV 630
AAPT AELERQAKVP L+ YMR AN+ LC +L ATAV++L+G D+ AVLACY+ AFSCILCCFETHLK VAKTIAANFGFLYNAKGRA+FL+FVG+LCFS + + F+ G M+ NA+FNFYVIFKYPE E++ QRKDLESEGRD+LRAN+GA+AQAGV+FA+NNP++ARK A AAASTYV
Sbjct: 38 AAPTAAELERQAKVPQLMIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSD--IAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 221
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.650e-56 Identity = 108/164 (65.85%), Postives = 135/164 (82.32%), Query Frame = 1
Query: 139 RGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQFAQNNPEVARKAAAAAASTYV 630
R NM LC+LL ATAV++L+G P+ VLA Y+FAF+CILCCFETH+ +A A+NFGFLYNAKGRA+FL+FVG+LCFSFG+ ILG+I+G+AMIA+++FNF+VI KYPE+ QNQQRKDLES RDF+R NQGA+A+ GV FAQNNP+ A AAA AST+V
Sbjct: 6 RLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGS--ILGYISGIAMIADSIFNFFVILKYPEV-QNQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAA-AAARTASTFV 165
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.790e-30 Identity = 78/146 (53.42%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 112 KVPMLIQYMRGANMILCLLLWATAVIQ-LVGTPDLPAA-VLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQG 543
+ P L+ YMR AN LC+L+ A AV+ +V PA+ VLA YV AFSC+LCCFE +L+ VAK IA NFGFLY+AK RA FL+FVG+LCFS G T G + G AMIANALFN V+ KYP+ N E E F++ N G
Sbjct: 78 QTPPLVIYMRVANFALCILMSAAAVLTVIVPAGATPASWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLGIT---GKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG 220
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH) HSP 1 Score: 126 bits (317), Expect = 9.880e-30 Identity = 68/148 (45.95%), Postives = 98/148 (66.22%), Query Frame = 1
Query: 178 TAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQ-------AGVQFAQNNPEVARK 600
T+++ ++ T VLACYV FSC+LCCFETHLK V+K IA NFGF+Y+AK R++F++F+G + FSF + G I GL M+ANA FN + +F+YP+ E + QRKD +SE +D+L +N Q A + + NPE+AR+
Sbjct: 4 TSLLAVLTTQSATTGVLACYVVVFSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSFS---LFGKIIGLCMLANAGFNLFAVFRYPQYE-DMQRKDAQSEIQDYLASNPAFAKQIVDAGLKASTEVLRQNPEIARQ 147
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A7S2MMX0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMX0_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.530e-22 Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 1
Query: 115 VPMLIQYMRGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQFAQNNPEVARKAAAAA 615
+P LI YMR AN+ L L+ +AV + + L ++ YV F C+ CC+ETHLK V+ IA NFGFLYNAK R +F++ + LC++ I+G IT +A N YV+FK+P + + DL +G + + Q +Q V +A+ NP+ + AA +A
Sbjct: 87 LPKLILYMRLANVALSALMITSAVTSALMSASLSNFIIGAYVSCFGCLFCCYETHLKQVSVFIADNFGFLYNAKARCLFMMLIATLCYTLN---IIGMITAFLCVAAVCLNVYVLFKHPHYQDQIKNDDLHGKGPETI---QDMASQYAVSYARENPDQVQAAARSA 247
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A7S2WC07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC07_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.870e-22 Identity = 68/169 (40.24%), Postives = 95/169 (56.21%), Query Frame = 1
Query: 133 YMRGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRD------------FLRANQ---GAMAQAGVQFAQNNPEVA 594
YMR AN+ + +L+ A+ + + L AV+A Y+ F C++CCFETHLK V+ IA NFGF+YNAKGR IF++ + LC + + G ITG M AL+N YVI +PE Q D + E + +++ N A+A AG Q+A NNPEVA
Sbjct: 94 YMRLANVAVAVLMVTAALTTFITSSSLSTAVIALYISCFGCLVCCFETHLKQVSIIIADNFGFMYNAKGRFIFMILMATLCMTLN---VFGQITGGLMYGVALYNLYVICMHPEYGSETQELDRKGENPNSIQHVAQSYATGYVQNNPDQVAAVASAGAQWAYNNPEVA 259
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.240e-19 Identity = 67/145 (46.21%), Postives = 85/145 (58.62%), Query Frame = 1
Query: 112 KVPMLIQYMRGANMILCLLLWATAVIQLVGTPDLPA-AVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQG 543
+ P L+ YMR AN LC+L+ A AV+ ++ +PA A A +V AF + VAK IA NFGFLY+AK RA FL+FVG+LCFS G T G + G AMIANALFN V+ KYP+ N E E F++ N G
Sbjct: 78 QTPPLVIYMRVANFALCILMSAAAVLTVI----VPAGATPASWVLAFYVL----------VAKHIANNFGFLYDAKSRATFLIFVGVLCFSLGIT---GKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG 205
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A7S3JYJ7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYJ7_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 3.760e-15 Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 112 KVPMLIQYMRGANMILCLLLWATAVIQLV-GTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDL 504
K+P I MR AN+ LL A ++L T D+ + V++ Y+FAF+ ++ FE H+ + K IA N GF+Y A GRA F++ +G+LCFS G+ G+ +I AL N +++FK+P E++ + DL
Sbjct: 88 KLPREIVLMRIANLCSAFLLACLAALKLQKNTGDVSSGVISFYLFAFAILIFTFECHVSFLGKVIADNLGFMYQAPGRASFMILLGMLCFSDEPLPGFGYFVGIFVIVTALLNAFIMFKFPNYERSCRINDL 219
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A485L7T0_9STRA (Aste57867_16065 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7T0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.450e-15 Identity = 57/166 (34.34%), Postives = 87/166 (52.41%), Query Frame = 1
Query: 112 KVPMLIQYMRGANMILCLLLWATAVIQLVG--TPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYPEIEQNQQRKDLESEGRDFLRANQGAMAQAGVQFAQNNPEVARKA 603
+ P L++YMR NM+ C+L + L T ++ A ++ YV F + FE L ++ I NFGFLY+ GRA F+ F+G + FGT LG++ G+ M ANAL NFYV+FK+PE + A +Q ++ Q+NP++A +A
Sbjct: 35 ETPKLLRYMRVGNMLCCVLQILAGIGGLASIITFNITAVFVSLYVIMFGVLFLLFECRLSSLEPKIRENFGFLYSYAGRARFIFFIGFM--DFGTGGGLGYLAGVIMCANALLNFYVMFKHPEFASGNLSSASDPT------AGYAPASQEATKYLQSNPDIAMQA 192
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Match: A0A7S2XJA4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJA4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 5.630e-15 Identity = 46/130 (35.38%), Postives = 77/130 (59.23%), Query Frame = 1
Query: 82 PTQAELERQAKVPMLIQYMRGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVFVGLLCFSFGTTFILGFITGLAMIANALFNFYVIFKYP 471
P+ L+ + +P +I +MR ANM + + L A ++++++ P + +LA Y F ++CC ET LK + IA NFGFL++A R F + + + +++ F G I +A+ A ALFN YV+F+YP
Sbjct: 37 PSARALQDEKDLPQVILFMRLANMGIAIALVACSIVKMMSFPSISNWILAVYATLFGLLICCLETQLKFLRVVIAVNFGFLFSAPWRFFFYLLLASITWAYNNLF--GKIVAIAIAATALFNTYVLFRYP 164 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2114.1 >prot_S-ischiensis_contig11.2114.1 ID=prot_S-ischiensis_contig11.2114.1|Name=mRNA_S-ischiensis_contig11.2114.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=171bp MLIQYMRGANMILCLLLWATAVIQLVGTPDLPAAVLACYVFAFSCILCCFback to top mRNA from alignment at S-ischiensis_contig11:1295161..1302278+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2114.1 ID=mRNA_S-ischiensis_contig11.2114.1|Name=mRNA_S-ischiensis_contig11.2114.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7118bp|location=Sequence derived from alignment at S-ischiensis_contig11:1295161..1302278+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1295161..1302278+ >mRNA_S-ischiensis_contig11.2114.1 ID=mRNA_S-ischiensis_contig11.2114.1|Name=mRNA_S-ischiensis_contig11.2114.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1026bp|location=Sequence derived from alignment at S-ischiensis_contig11:1295161..1302278+ (Schizocladia ischiensis KU_0333)back to top |