prot_S-ischiensis_contig11.2096.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2096.1
Unique Nameprot_S-ischiensis_contig11.2096.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length202
Homology
BLAST of mRNA_S-ischiensis_contig11.2096.1 vs. uniprot
Match: A0A6H5JAB7_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAB7_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.450e-29
Identity = 69/103 (66.99%), Postives = 75/103 (72.82%), Query Frame = 0
Query:  101 VDLFARTWQSLDFGVVLENLSDECRTAEGRRMALVPDFKDTLEEVHELYECVTEVLKLPG-GVPLRGFLDVEGVLAVAAQGSILEAPEIVDMARVLQALQGLR 202
            VDLFARTW+SLDFGVVLE LS ECRT  GR  AL+PDFK TLEEVHELYE V EVL L G  VPLR  + VE  LA+AA GS LEA EI  +A  L+ L  LR
Sbjct:  153 VDLFARTWESLDFGVVLERLSRECRTEMGRSRALIPDFKTTLEEVHELYERVNEVLLLAGDAVPLRAGMAVEPQLAIAAAGSTLEATEIAAVASALEGLFELR 255          
BLAST of mRNA_S-ischiensis_contig11.2096.1 vs. uniprot
Match: D8LGP1_ECTSI (MutS protein homolog 1B MutS-like ATPases involved in mismatch repair, family 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP1_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 2.200e-28
Identity = 68/103 (66.02%), Postives = 74/103 (71.84%), Query Frame = 0
Query:  101 VDLFARTWQSLDFGVVLENLSDECRTAEGRRMALVPDFKDTLEEVHELYECVTEVLKLPG-GVPLRGFLDVEGVLAVAAQGSILEAPEIVDMARVLQALQGLR 202
            VDLFARTW+SLDFGVVLE LS ECRT  GR  AL+PDFK TLEEVHELYE V EVL L G  VPLR  + VE  LA+AA GS LE  EI  +A  L+ L  LR
Sbjct:   36 VDLFARTWESLDFGVVLERLSRECRTEMGRSRALIPDFKTTLEEVHELYERVNEVLLLAGDAVPLRAGMAVEPQLAIAAAGSTLEPTEIAAVASALEGLFELR 138          
BLAST of mRNA_S-ischiensis_contig11.2096.1 vs. uniprot
Match: A0A835YZI9_9STRA (Muts protein-like protein 1B muts-like ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI9_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.710e-22
Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 0
Query:  101 VDLFARTWQSLDFGVVLENLSDECRTAEGRRMALVPDFKDTLEEVHELYECVTEVLKLPGGVPLRGFLDVEGVLAVAAQGSILEAPEIVDMARVLQALQGLR 202
            VDLFARTW+SLDFGVVLE+LS EC TA GR+ AL  DFK  +E V  LY  V EV  L   VP+   +D+E ++A+AA+G+ LE PE+ +++  L +L  L+
Sbjct:   29 VDLFARTWESLDFGVVLEHLSKECWTAMGRKAALKADFKADVESVQALYRGVEEVYSLTEPVPIASGMDIEAIIALAAKGTTLEPPELREVSDCLTSLSNLK 130          
BLAST of mRNA_S-ischiensis_contig11.2096.1 vs. uniprot
Match: A0A7S3Y253_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y253_HETAK)

HSP 1 Score: 94.0 bits (232), Expect = 2.760e-19
Identity = 50/102 (49.02%), Postives = 64/102 (62.75%), Query Frame = 0
Query:  101 VDLFARTWQSLDFGVVLENLSDECRTAEGRRMALVPDFKDTLEEVHELYECVTEVLKLPGGVPLRGFLDVEGVLAVAAQGSILEAPEIVDMARVLQALQGLR 202
            VDL ARTWQSLDF V+L+ L+  C+TA G+R A  P F  +  E    Y  V EV      VPLR  +DVE  LA+AAQG++LE PE+ ++A  L+ L  LR
Sbjct:   94 VDLEARTWQSLDFQVLLDGLAKYCQTAMGQRKARAPHFAGSAAEARARYTAVREVWDCVDPVPLRSGMDVEAQLALAAQGTVLEVPELREVAAALEGLAALR 195          
BLAST of mRNA_S-ischiensis_contig11.2096.1 vs. uniprot
Match: A0A0G4ECS6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECS6_VITBC)

HSP 1 Score: 65.9 bits (159), Expect = 4.450e-9
Identity = 48/155 (30.97%), Postives = 73/155 (47.10%), Query Frame = 0
Query:   44 SSFRGAWQPLLPTIPLQNERRQPRRTVRHRCSASAVSGGPPDHDVVQETEAGQTRRAVDLFARTWQSLDFGVVLENLSDECRTAEGRRMALVPDFKDTLEEVHELYECVTEVLKLPGGVPLRGFLDVEGVLAVAAQGSILEAPEIVDMARVLQAL 198
            S+FR    P     PL             R  A A+S  P   D +           +DLF RTWQSLD+ VV+ +L++   T+ GRR+A    F  + +E   LYE V +V +L   +P    LD+E ++ V+ +G    +  + D+ R+  AL
Sbjct:   21 SAFRILPHPARTRAPLDR-----------RWHAMAMSALPMSDDALH----------LDLFERTWQSLDWRVVMASLAEAASTSPGRRLARSASFAGSHDECLVLYEQVGDVRRLSEQLPFATSLDIEHLVNVSDEGRARSSFSLPDLYRIGTAL 154          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JAB7_9PHAE4.450e-2966.99DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
D8LGP1_ECTSI2.200e-2866.02MutS protein homolog 1B MutS-like ATPases involved... [more]
A0A835YZI9_9STRA1.710e-2251.96Muts protein-like protein 1B muts-like ATPase n=1 ... [more]
A0A7S3Y253_HETAK2.760e-1949.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0G4ECS6_VITBC4.450e-930.97Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..202
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.545

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1164269..1165278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2096.1mRNA_S-ischiensis_contig11.2096.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 1164269..1165361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2096.1 ID=prot_S-ischiensis_contig11.2096.1|Name=mRNA_S-ischiensis_contig11.2096.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=202bp
MAPASKVFFAALVALISSPRGSTFHQGCAKCASVRGWARGRETSSFRGAW
QPLLPTIPLQNERRQPRRTVRHRCSASAVSGGPPDHDVVQETEAGQTRRA
VDLFARTWQSLDFGVVLENLSDECRTAEGRRMALVPDFKDTLEEVHELYE
CVTEVLKLPGGVPLRGFLDVEGVLAVAAQGSILEAPEIVDMARVLQALQG
LR
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