prot_S-ischiensis_contig11.2033.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2033.1
Unique Nameprot_S-ischiensis_contig11.2033.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length149
Homology
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BLAST of mRNA_S-ischiensis_contig11.2033.1 vs. uniprot
Match: D7FYJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ8_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.420e-30
Identity = 64/140 (45.71%), Postives = 79/140 (56.43%), Query Frame = 0 
Query:    3 HGPPPDVVRVCVRTLGLADKANGLFRFPPFRTEWLPRLLECALDALTTGSHPLLQEELGGLVFSLAKVDHAAFVDAFLPPFVASRLPPXXXXXXXXXXXXXTAARAEVLLSPWRAGQHLDAPSFAAALRGFVGDLSYLRA 142
            H  PPD+VR  +  L  + +  GLFRFPPF   WL  LL  AL  L  G+HPL QEE+  LVF LA+VDH AF   FLP F+ +                  A + E LL+PWRAG HLD P+F++ L   V DLS+ RA
Sbjct:   40 HSVPPDLVRRGLSVLEASHRTGGLFRFPPFAATWLQPLLTDALRGLAEGAHPLTQEEVHRLVFDLAEVDHRAFATEFLPHFLGTHY------------SWLGAEQKEALLAPWRAGTHLDVPTFSSFLEALVSDLSFFRA 167
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BLAST of mRNA_S-ischiensis_contig11.2033.1 vs. uniprot
Match: A0A6H5KJI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI2_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.130e-26
Identity = 63/140 (45.00%), Postives = 78/140 (55.71%), Query Frame = 0 
Query:    3 HGPPPDVVRVCVRTLGLADKANGLFRFPPFRTEWLPRLLECALDALTTGSHPLLQEELGGLVFSLAKVDHAAFVDAFLPPFVASRLPPXXXXXXXXXXXXXTAARAEVLLSPWRAGQHLDAPSFAAALRGFVGDLSYLRA 142
            H  PPD+VR  +  L  + +  GLFRFPPF   WL  LL  AL  L  G+HPL  EE+  LVF LA+VDH AF   FLP F+ +                  A + E LL+PWRAG HLD P+F++ L   V DLS+ RA
Sbjct:  514 HSVPPDLVRRGLSVLEASHRTGGLFRFPPFAATWLQPLLTDALWGLAEGAHPLTHEEVHRLVFDLAEVDHRAFATEFLPHFLGTHY------------SWLGAEQKEALLAPWRAGTHLDMPTFSSFLEALVSDLSFFRA 641
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYJ8_ECTSI1.420e-3045.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJI2_9PHAE1.130e-2645.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040016Exportin-6PANTHERPTHR21452FAMILY NOT NAMEDcoord: 5..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:572705..575474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2033.1mRNA_S-ischiensis_contig11.2033.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 571919..575474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2033.1 ID=prot_S-ischiensis_contig11.2033.1|Name=mRNA_S-ischiensis_contig11.2033.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=149bp
PRHGPPPDVVRVCVRTLGLADKANGLFRFPPFRTEWLPRLLECALDALTT
GSHPLLQEELGGLVFSLAKVDHAAFVDAFLPPFVASRLPPPPPTPAPGAA
AASTAARAEVLLSPWRAGQHLDAPSFAAALRGFVGDLSYLRAARAAAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040016XPO6