prot_S-ischiensis_contig11.2026.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2026.1
Unique Nameprot_S-ischiensis_contig11.2026.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length243
Homology
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BLAST of mRNA_S-ischiensis_contig11.2026.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 3.620e-26
Identity = 84/196 (42.86%), Postives = 108/196 (55.10%), Query Frame = 0 
Query:    4 HLGKGEEALALARRVAGLQERRRRLVLARERERARRQLETMAHAFWEGERREYYTVIKKAVERMNSLRTTDMLKDKRRENSSSTGNQVKIPYWLRARAARFVRTLRIRGGLGGVASLSKRWHALQVARASSSKSSLAVAGGGGLWGASPGQRPHISQVVSWATSAAAFLAVTGVELQFPWPTDFTKEVALQPPVFL 199
            HLG      AL RRVA +QERR+R+V  R++ER RR+ +      WE  R +   V+  A++R+  LR  D   D     +S++  Q K+PYWLR RAARFVR  R R        L +R  A Q A         AV           G +PHIS ++S   SAAAFLAV+GVEL  PWP + TK++ALQPP FL
Sbjct: 1774 HLGGTAXXXALCRRVALIQERRKRVVEVRDQERCRRRRDERQFEAWEKSRVQSQAVVDMALDRIEQLRMPDKQDDVINRIASTSQEQAKVPYWLRTRAARFVRMQRYR--------LGERIRAQQRAH-------RAV-----------GIQPHISHLMSRVLSAAAFLAVSGVELTLPWPDELTKQMALQPPHFL 1943
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BLAST of mRNA_S-ischiensis_contig11.2026.1 vs. uniprot
Match: A0A6H5KG36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.430e-18
Identity = 76/196 (38.78%), Postives = 95/196 (48.47%), Query Frame = 0 
Query:    4 HLGKGEEALALARRVAGLQERRRRLVLARERERARRQLETMAHAFWEGERREYYTVIKKAVERMNSLRTTDMLKDKRRENSSSTGNQVKIPYWLRARAARFVRTLRIRGGLGGVASLSKRWHALQVARASSSKSSLAVAGGGGLWGASPGQRPHISQVVSWATSAAAFLAVTGVELQFPWPTDFTKEVALQPPVFL 199
            HLG    A AL RRVA +QERR+R+                              V+  A++R+  LR  D   D     +S++  Q K+PYWLR RAARFVR  R R        L +R  A Q A         AV           G +PHIS ++S   SAAAFLAV+GVEL  PWP + TK++ALQPP FL
Sbjct: 2223 HLGGTAAAAALCRRVALIQERRKRVA-----------------------------VVDMALDRIEQLRLPDKQDDVINRIASTSQEQSKVPYWLRTRAARFVRMQRYR--------LGERIRAQQRAH-------RAV-----------GIQPHISHLMSRVLSAAAFLAVSGVELTLPWPDELTKQMALQPPHFL 2363
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHU3_ECTSI3.620e-2642.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KG36_9PHAE2.430e-1838.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:549022..553628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2026.1mRNA_S-ischiensis_contig11.2026.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 549022..553629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2026.1 ID=prot_S-ischiensis_contig11.2026.1|Name=mRNA_S-ischiensis_contig11.2026.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=243bp
GINHLGKGEEALALARRVAGLQERRRRLVLARERERARRQLETMAHAFWE
GERREYYTVIKKAVERMNSLRTTDMLKDKRRENSSSTGNQVKIPYWLRAR
AARFVRTLRIRGGLGGVASLSKRWHALQVARASSSKSSLAVAGGGGLWGA
SPGQRPHISQVVSWATSAAAFLAVTGVELQFPWPTDFTKEVALQPPVFLT
AETMQQQQHHHHYHHHQQQQQRAGTGPAHGTGQVPVSAGGPEA
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