prot_S-ischiensis_contig11.2009.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2009.1
Unique Nameprot_S-ischiensis_contig11.2009.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length233
Homology
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A7S2C585_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C585_9STRA)

HSP 1 Score: 130 bits (326), Expect = 5.770e-34
Identity = 78/143 (54.55%), Postives = 97/143 (67.83%), Query Frame = 0
Query:   94 AQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPM--GMMPQMGAAPAAGGEAEAEEAAPE---KTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            ++ PSEK++RLCDE+ SLNVIE++ L   +KE++G+ D  +MPM    MP M AAP                 K  FD+KL GF  KSKIKVIKEVRAITGLGLKEAK+LVEG PKTIKKE+ KE  EE+  +LK V  +V+L
Sbjct:   60 SRAPSEKIVRLCDELCSLNVIEMNDLVSTFKEKVGLSDMDVMPMMGAAMPNMAAAPMGAXXXXXXXXXXXXXXKAFFDLKLLGFDAKSKIKVIKEVRAITGLGLKEAKDLVEGAPKTIKKELSKEAGEELLAKLKAVDADVSL 202          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A7S2WIW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIW3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.430e-33
Identity = 78/143 (54.55%), Postives = 98/143 (68.53%), Query Frame = 0
Query:   97 PSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPM-GMMPQMGAAPAAGG-------EAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            PSEKV  LCD++  LNVIE++QL  L+K+++G+    +MPM G         A GG       ++  EEAAPEK  FD+KL GF DK+KIKVIKEVRAITGLGLKEAKELVEG PK +KKEV K + + + ++LK  G EV L
Sbjct:   94 PSEKVQALCDQLCELNVIEMNQLVTLFKDKVGLTGADIMPMMGAXXXXXXXXAMGGXXXXXXDDSAEEEAAPEKEFFDLKLVGFDDKAKIKVIKEVRAITGLGLKEAKELVEGAPKIVKKEVSKADVDGLVEKLKAAGAEVAL 236          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A2V3IRG8_9FLOR (50S ribosomal protein L12, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRG8_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 2.620e-33
Identity = 85/163 (52.15%), Postives = 102/163 (62.58%), Query Frame = 0
Query:   69 RRFSSEPDSDDADPGGPPPPMHSNVAQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            R  S+E  S D   G P PP  + V    S KV  L D++VSLN++EV +LT   K+RLGI D+  MPM + P M A   A     AEE   EKT FD+KL  F    KI VIKEVRA+TGLGLKEAK LVE  PK  K EV K+EAE+I  +LK++GGEV L
Sbjct:   12 RYLSAEALSQDTQ-GVPSPPSMTPVV---SAKVKGLLDDLVSLNMLEVKELTDALKDRLGIDDSASMPMAINPAMFAGMGAAPAPAAEEKVEEKTAFDLKLNKFDAAKKIAVIKEVRALTGLGLKEAKALVEDAPKVFKTEVPKDEAEQIRDKLKEIGGEVLL 170          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A6T7BM22_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BM22_9STRA)

HSP 1 Score: 121 bits (304), Expect = 5.160e-31
Identity = 76/140 (54.29%), Postives = 95/140 (67.86%), Query Frame = 0
Query:   99 EKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGM---MPQMGAAPAAGGEAEAEEAAPE----KTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            E V +L DE+ SLNVIE++QL K +K+++G+    +MPMGM   MP MGAA                   K  FD+KL GF DKSKIKVIKEVRAI+GLGLKEAKELVEG PK +KK++ K +AEE+ ++LK VG EV L
Sbjct:   35 ENVQKLVDELCSLNVIEMNQLVKSFKDKVGLTGADVMPMGMPMGMPAMGAAXXXXXXXXXXXXXXXXXXXKEFFDLKLLGFDDKSKIKVIKEVRAISGLGLKEAKELVEGAPKVVKKDLAKADAEELIEKLKAVGAEVAL 174          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A830HIP0_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HIP0_9CHLO)

HSP 1 Score: 122 bits (306), Expect = 5.290e-31
Identity = 78/148 (52.70%), Postives = 101/148 (68.24%), Query Frame = 0
Query:   91 SNVAQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPM-------MPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            S  A   SEKV++L DEI +L ++E + LT+L K+RLG+ + P        MPM M P  GAAPAA  +A AEEAAP KT FDV+L  F    KIK+IKEVR  T LGLKEAKELVE  P  +KK + KE+AEE++K+L ++G +V+L
Sbjct:   55 SEDAPAASEKVMKLADEITALTLLETADLTELLKDRLGV-ELPAGGFAMGAMPMAM-PAAGAAPAAADDAPAEEAAPAKTDFDVQLDAFDAGQKIKLIKEVRTATDLGLKEAKELVESAPCVVKKGLPKEQAEELQKKLIELGAQVSL 200          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: R7QPT0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPT0_CHOCR)

HSP 1 Score: 122 bits (307), Expect = 7.590e-31
Identity = 79/157 (50.32%), Postives = 98/157 (62.42%), Query Frame = 0
Query:   75 PDSDDADPGGPPPPMHSNVAQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            P S  +D  G PP   +  A+ P  +V  + DE+V LN++EV QLT   K+RLGI D+  MPM      G  P AG  AEA E   EK+ FD+KL  F    KI VIKE+R+ITGLGLKEAK +VE  PK  K EV KEEAE+I  +LK++G EV L
Sbjct:   73 PTSSASDAIGIPPADGAATAESP--RVQAILDELVQLNMLEVKQLTDGLKDRLGIDDSMTMPMNPAMFAGMVPGAGAPAEAAEPVVEKSAFDLKLEKFDAAKKIAVIKEIRSITGLGLKEAKAMVEEAPKVFKSEVAKEEAEQIRDKLKEIGAEVKL 227          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A087SG83_AUXPR (50S ribosomal protein L7/L12 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SG83_AUXPR)

HSP 1 Score: 120 bits (301), Expect = 1.960e-30
Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 0
Query:  100 KVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            +V+ L D+I  LN++EVS LT+L ++RL +P +   PM     + AAPAA    E E    EKT FDVKL GF   +KIKVIKE+RA+T LGLKEAKELVEG P  +KK +KKEEAEE++K+L+ VG +++L
Sbjct:   58 RVLELADQITQLNLLEVSDLTELLRKRLNLPASYARPMYAAGPVAAAPAA----EPEAPKVEKTAFDVKLDGFDAAAKIKVIKEIRAVTELGLKEAKELVEGAPVVVKKGLKKEEAEELQKKLEAVGAKISL 185          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A7R9TY33_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TY33_9VIRI)

HSP 1 Score: 120 bits (302), Expect = 2.380e-30
Identity = 79/139 (56.83%), Postives = 98/139 (70.50%), Query Frame = 0
Query:   97 PSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQ---MGAAPAAGGEAEAEEAAP----EKTVFDVKLTGFSDKSKIKVIKEVRAIT-GLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGG 227
            PSE+V+ L D+I  LN+IEV+ LTK+ K++LG+PD P MP+GM      MG AP  GG+A A +AA     EKT FDVKL  F   +KIK+IKEVRAI   LGLK+AKELVE  P T+   +KKEEAEEI K+L+ VGG
Sbjct:   65 PSERVVALADQIAELNLIEVADLTKVIKKKLGLPDAPAMPVGMXXXXXXMGGAP--GGDAGAGDAAAAQVEEKTAFDVKLEKFDAATKIKLIKEVRAIKPDLGLKDAKELVEKAPATLATGLKKEEAEEIVKKLEAVGG 201          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A6H5L7K0_9PHAE (Ribosomal_L12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7K0_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 2.880e-30
Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 0
Query:   78 DDADPGGPPPPMHSNVAQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            DD DP GPPPP+  ++   PS KV+ +   I SLN +E++ L  L+K +LG+ + P +  G     G         +A  AA EKT+F VK+TGF DK+KIKVIKEVR ITGLGL+EAKE+VE +P+ +K+++K++EAE ++ +L+ VG  V L
Sbjct:  149 DDGDP-GPPPPLDPSIVTEPSPKVLEVMASIESLNFVEMAMLIDLFKNKLGLDELPTLSFGGAD--GGXXXXXXXEDAPAAAAEKTIFKVKVTGFGDKAKIKVIKEVRVITGLGLREAKEMVESLPQVVKEDLKEDEAEAMKAKLEAVGATVEL 299          
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A7S0Q449_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q449_9EUKA)

HSP 1 Score: 119 bits (298), Expect = 1.010e-29
Identity = 78/143 (54.55%), Postives = 93/143 (65.03%), Query Frame = 0
Query:   94 AQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMM-----PQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 231
            A  PS KV  L D+I +L ++E +QLT   KERLGI    MMP   M     P  G A AA  E   EE  PEKT F V+L  F   SKIKVIKEVR+ITGLGLKEAKELVE  PK +K ++KKEEAE I+ +L++VGG V +
Sbjct:   69 AAEPSPKVQELVDQISALTLLEAAQLTDALKERLGISSAMMMPAAPMAAAAGPGPGLASAAPAE---EEVVPEKTAFSVRLEKFDAASKIKVIKEVRSITGLGLKEAKELVENAPKELKGDIKKEEAEVIKAKLEEVGGVVVI 208          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2C585_9STRA5.770e-3454.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WIW3_9STRA1.430e-3354.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V3IRG8_9FLOR2.620e-3352.1550S ribosomal protein L12, chloroplastic n=1 Tax=G... [more]
A0A6T7BM22_9STRA5.160e-3154.29Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A830HIP0_9CHLO5.290e-3152.70Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
R7QPT0_CHOCR7.590e-3150.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A087SG83_AUXPR1.960e-3053.7950S ribosomal protein L7/L12 n=1 Tax=Auxenochlorel... [more]
A0A7R9TY33_9VIRI2.380e-3056.83Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A6H5L7K0_9PHAE2.880e-3046.75Ribosomal_L12 domain-containing protein n=2 Tax=Ec... [more]
A0A7S0Q449_9EUKA1.010e-2954.55Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 208..228
NoneNo IPR availablePANTHERPTHR45987FAMILY NOT NAMEDcoord: 89..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePRODOMPD001326coord: 166..231
e-value: 2.0E-7
score: 131.0
IPR008932Ribosomal protein L7/L12, oligomerisationPFAMPF16320Ribosomal_L12_Ncoord: 104..152
e-value: 4.6E-11
score: 42.2
IPR000206Ribosomal protein L7/L12TIGRFAMTIGR00855TIGR00855coord: 104..231
e-value: 7.2E-32
score: 108.4
IPR000206Ribosomal protein L7/L12HAMAPMF_00368Ribosomal_L7_L12coord: 98..232
score: 19.255
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 158..231
e-value: 2.3E-28
score: 100.0
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 161..231
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 165..231
e-value: 2.0E-26
score: 92.1
IPR036235Ribosomal protein L7/L12, oligomerisation domain superfamilySUPERFAMILY48300Ribosomal protein L7/12, oligomerisation (N-terminal) domaincoord: 103..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:396126..403497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2009.1mRNA_S-ischiensis_contig11.2009.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 396121..403682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2009.1 ID=prot_S-ischiensis_contig11.2009.1|Name=mRNA_S-ischiensis_contig11.2009.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=233bp
MAHRAPSTAGRALTCAIRRCRAAPPVVRSLHTKRPAEHGFRHRGTWSTRR
NWRCGVWSQRYGQRQGQDRRFSSEPDSDDADPGGPPPPMHSNVAQGPSEK
VIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAG
GEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVE
GVPKTIKKEVKKEEAEEIEKQLKDVGGEVTLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008932Ribosomal_L7/L12_oligo
IPR000206Ribosomal_L7/12
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR013823Ribosomal_L7/L12_C
IPR036235Ribosomal_L7/L12_oligo_N_sf