mRNA_S-ischiensis_contig11.2009.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2009.1
Unique NamemRNA_S-ischiensis_contig11.2009.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A7S2C585_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C585_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.280e-33
Identity = 78/143 (54.55%), Postives = 97/143 (67.83%), Query Frame = 3 
Query:  285 AQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPM--GMMPQMGAAPAAGGEAEAEEAAPE---KTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            ++ PSEK++RLCDE+ SLNVIE++ L   +KE++G+ D  +MPM    MP M AAP                 K  FD+KL GF  KSKIKVIKEVRAITGLGLKEAK+LVEG PKTIKKE+ KE  EE+  +LK V  +V+L
Sbjct:   60 SRAPSEKIVRLCDELCSLNVIEMNDLVSTFKEKVGLSDMDVMPMMGAAMPNMAAAPMGAXXXXXXXXXXXXXXKAFFDLKLLGFDAKSKIKVIKEVRAITGLGLKEAKDLVEGAPKTIKKELSKEAGEELLAKLKAVDADVSL 202
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A7S2WIW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIW3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 8.120e-33
Identity = 78/143 (54.55%), Postives = 98/143 (68.53%), Query Frame = 3 
Query:  294 PSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPM-GMMPQMGAAPAAGG-------EAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            PSEKV  LCD++  LNVIE++QL  L+K+++G+    +MPM G         A GG       ++  EEAAPEK  FD+KL GF DK+KIKVIKEVRAITGLGLKEAKELVEG PK +KKEV K + + + ++LK  G EV L
Sbjct:   94 PSEKVQALCDQLCELNVIEMNQLVTLFKDKVGLTGADIMPMMGAXXXXXXXXAMGGXXXXXXDDSAEEEAAPEKEFFDLKLVGFDDKAKIKVIKEVRAITGLGLKEAKELVEGAPKIVKKEVSKADVDGLVEKLKAAGAEVAL 236
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A2V3IRG8_9FLOR (50S ribosomal protein L12, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRG8_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 1.460e-32
Identity = 85/163 (52.15%), Postives = 102/163 (62.58%), Query Frame = 3 
Query:  210 RRFSSEPDSDDADPGGPPPPMHSNVAQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            R  S+E  S D   G P PP  + V    S KV  L D++VSLN++EV +LT   K+RLGI D+  MPM + P M A   A     AEE   EKT FD+KL  F    KI VIKEVRA+TGLGLKEAK LVE  PK  K EV K+EAE+I  +LK++GGEV L
Sbjct:   12 RYLSAEALSQDTQ-GVPSPPSMTPVV---SAKVKGLLDDLVSLNMLEVKELTDALKDRLGIDDSASMPMAINPAMFAGMGAAPAPAAEEKVEEKTAFDLKLNKFDAAKKIAVIKEVRALTGLGLKEAKALVEDAPKVFKTEVPKDEAEQIRDKLKEIGGEVLL 170
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A6T7BM22_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BM22_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.730e-30
Identity = 76/140 (54.29%), Postives = 95/140 (67.86%), Query Frame = 3 
Query:  300 EKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGM---MPQMGAAPAAGGEAEAEEAAPE----KTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            E V +L DE+ SLNVIE++QL K +K+++G+    +MPMGM   MP MGAA                   K  FD+KL GF DKSKIKVIKEVRAI+GLGLKEAKELVEG PK +KK++ K +AEE+ ++LK VG EV L
Sbjct:   35 ENVQKLVDELCSLNVIEMNQLVKSFKDKVGLTGADVMPMGMPMGMPAMGAAXXXXXXXXXXXXXXXXXXXKEFFDLKLLGFDDKSKIKVIKEVRAISGLGLKEAKELVEGAPKVVKKDLAKADAEELIEKLKAVGAEVAL 174
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A830HIP0_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HIP0_9CHLO)

HSP 1 Score: 122 bits (306), Expect = 2.820e-30
Identity = 78/148 (52.70%), Postives = 101/148 (68.24%), Query Frame = 3 
Query:  276 SNVAQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPM-------MPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            S  A   SEKV++L DEI +L ++E + LT+L K+RLG+ + P        MPM M P  GAAPAA  +A AEEAAP KT FDV+L  F    KIK+IKEVR  T LGLKEAKELVE  P  +KK + KE+AEE++K+L ++G +V+L
Sbjct:   55 SEDAPAASEKVMKLADEITALTLLETADLTELLKDRLGV-ELPAGGFAMGAMPMAM-PAAGAAPAAADDAPAEEAAPAKTDFDVQLDAFDAGQKIKLIKEVRTATDLGLKEAKELVESAPCVVKKGLPKEQAEELQKKLIELGAQVSL 200
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: R7QPT0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPT0_CHOCR)

HSP 1 Score: 122 bits (307), Expect = 4.060e-30
Identity = 79/157 (50.32%), Postives = 98/157 (62.42%), Query Frame = 3 
Query:  228 PDSDDADPGGPPPPMHSNVAQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            P S  +D  G PP   +  A+ P  +V  + DE+V LN++EV QLT   K+RLGI D+  MPM      G  P AG  AEA E   EK+ FD+KL  F    KI VIKE+R+ITGLGLKEAK +VE  PK  K EV KEEAE+I  +LK++G EV L
Sbjct:   73 PTSSASDAIGIPPADGAATAESP--RVQAILDELVQLNMLEVKQLTDGLKDRLGIDDSMTMPMNPAMFAGMVPGAGAPAEAAEPVVEKSAFDLKLEKFDAAKKIAVIKEIRSITGLGLKEAKAMVEEAPKVFKSEVAKEEAEQIRDKLKEIGAEVKL 227
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A087SG83_AUXPR (50S ribosomal protein L7/L12 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SG83_AUXPR)

HSP 1 Score: 120 bits (301), Expect = 1.030e-29
Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 3 
Query:  303 KVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            +V+ L D+I  LN++EVS LT+L ++RL +P +   PM     + AAPAA    E E    EKT FDVKL GF   +KIKVIKE+RA+T LGLKEAKELVEG P  +KK +KKEEAEE++K+L+ VG +++L
Sbjct:   58 RVLELADQITQLNLLEVSDLTELLRKRLNLPASYARPMYAAGPVAAAPAA----EPEAPKVEKTAFDVKLDGFDAAAKIKVIKEIRAVTELGLKEAKELVEGAPVVVKKGLKKEEAEELQKKLEAVGAKISL 185
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A7R9TY33_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TY33_9VIRI)

HSP 1 Score: 120 bits (302), Expect = 1.250e-29
Identity = 79/139 (56.83%), Postives = 98/139 (70.50%), Query Frame = 3 
Query:  294 PSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQ---MGAAPAAGGEAEAEEAAP----EKTVFDVKLTGFSDKSKIKVIKEVRAIT-GLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGG 686
            PSE+V+ L D+I  LN+IEV+ LTK+ K++LG+PD P MP+GM      MG AP  GG+A A +AA     EKT FDVKL  F   +KIK+IKEVRAI   LGLK+AKELVE  P T+   +KKEEAEEI K+L+ VGG
Sbjct:   65 PSERVVALADQIAELNLIEVADLTKVIKKKLGLPDAPAMPVGMXXXXXXMGGAP--GGDAGAGDAAAAQVEEKTAFDVKLEKFDAATKIKLIKEVRAIKPDLGLKDAKELVEKAPATLATGLKKEEAEEIVKKLEAVGG 201
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A6H5L7K0_9PHAE (Ribosomal_L12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7K0_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.550e-29
Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 3 
Query:  237 DDADPGGPPPPMHSNVAQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            DD DP GPPPP+  ++   PS KV+ +   I SLN +E++ L  L+K +LG+ + P +  G     G         +A  AA EKT+F VK+TGF DK+KIKVIKEVR ITGLGL+EAKE+VE +P+ +K+++K++EAE ++ +L+ VG  V L
Sbjct:  149 DDGDP-GPPPPLDPSIVTEPSPKVLEVMASIESLNFVEMAMLIDLFKNKLGLDELPTLSFGGAD--GGXXXXXXXEDAPAAAAEKTIFKVKVTGFGDKAKIKVIKEVRVITGLGLREAKEMVESLPQVVKEDLKEDEAEAMKAKLEAVGATVEL 299
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BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Match: A0A7S0Q449_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q449_9EUKA)

HSP 1 Score: 119 bits (298), Expect = 5.250e-29
Identity = 78/143 (54.55%), Postives = 93/143 (65.03%), Query Frame = 3 
Query:  285 AQGPSEKVIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMM-----PQMGAAPAAGGEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVEGVPKTIKKEVKKEEAEEIEKQLKDVGGEVTL 698
            A  PS KV  L D+I +L ++E +QLT   KERLGI    MMP   M     P  G A AA  E   EE  PEKT F V+L  F   SKIKVIKEVR+ITGLGLKEAKELVE  PK +K ++KKEEAE I+ +L++VGG V +
Sbjct:   69 AAEPSPKVQELVDQISALTLLEAAQLTDALKERLGISSAMMMPAAPMAAAAGPGPGLASAAPAE---EEVVPEKTAFSVRLEKFDAASKIKVIKEVRSITGLGLKEAKELVENAPKELKGDIKKEEAEVIKAKLEEVGGVVVI 208
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2C585_9STRA3.280e-3354.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WIW3_9STRA8.120e-3354.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V3IRG8_9FLOR1.460e-3252.1550S ribosomal protein L12, chloroplastic n=1 Tax=G... [more]
A0A6T7BM22_9STRA2.730e-3054.29Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A830HIP0_9CHLO2.820e-3052.70Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
R7QPT0_CHOCR4.060e-3050.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A087SG83_AUXPR1.030e-2953.7950S ribosomal protein L7/L12 n=1 Tax=Auxenochlorel... [more]
A0A7R9TY33_9VIRI1.250e-2956.83Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A6H5L7K0_9PHAE1.550e-2946.75Ribosomal_L12 domain-containing protein n=2 Tax=Ec... [more]
A0A7S0Q449_9EUKA5.250e-2954.55Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:396121..403682 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score131.7
Seed ortholog evalue4.4e-28
Seed eggNOG ortholog2880.D7FPT9
KEGG koko:K02935
KEGG Pathwayko03010,map03010
KEGG ModuleM00178
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0222@1,KOG1715@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categorymitochondrion
Exons6
Model size889
Cds size699
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2009.1prot_S-ischiensis_contig11.2009.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 396126..403497 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815588.9295378-UTR-S-ischiensis_contig11:396120..3961251622815588.9295378-UTR-S-ischiensis_contig11:396120..396125Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 396121..396125 +
1695739788.0353398-UTR-S-ischiensis_contig11:396120..3961251695739788.0353398-UTR-S-ischiensis_contig11:396120..396125Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 396121..396125 +
1622815589.0364363-UTR-S-ischiensis_contig11:403497..4036821622815589.0364363-UTR-S-ischiensis_contig11:403497..403682Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 403498..403682 +
1695739788.123216-UTR-S-ischiensis_contig11:403497..4036821695739788.123216-UTR-S-ischiensis_contig11:403497..403682Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 403498..403682 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815588.9437475-CDS-S-ischiensis_contig11:396125..3962261622815588.9437475-CDS-S-ischiensis_contig11:396125..396226Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 396126..396226 +
1695739788.052118-CDS-S-ischiensis_contig11:396125..3962261695739788.052118-CDS-S-ischiensis_contig11:396125..396226Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 396126..396226 +
1622815588.9594507-CDS-S-ischiensis_contig11:396333..3966041622815588.9594507-CDS-S-ischiensis_contig11:396333..396604Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 396334..396604 +
1695739788.0623577-CDS-S-ischiensis_contig11:396333..3966041695739788.0623577-CDS-S-ischiensis_contig11:396333..396604Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 396334..396604 +
1622815588.9714842-CDS-S-ischiensis_contig11:396976..3971411622815588.9714842-CDS-S-ischiensis_contig11:396976..397141Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 396977..397141 +
1695739788.0710006-CDS-S-ischiensis_contig11:396976..3971411695739788.0710006-CDS-S-ischiensis_contig11:396976..397141Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 396977..397141 +
1622815588.988962-CDS-S-ischiensis_contig11:398351..3984261622815588.988962-CDS-S-ischiensis_contig11:398351..398426Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 398352..398426 +
1695739788.0812738-CDS-S-ischiensis_contig11:398351..3984261695739788.0812738-CDS-S-ischiensis_contig11:398351..398426Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 398352..398426 +
1622815589.0030022-CDS-S-ischiensis_contig11:401170..4012301622815589.0030022-CDS-S-ischiensis_contig11:401170..401230Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 401171..401230 +
1695739788.093641-CDS-S-ischiensis_contig11:401170..4012301695739788.093641-CDS-S-ischiensis_contig11:401170..401230Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 401171..401230 +
1622815589.0247574-CDS-S-ischiensis_contig11:403470..4034971622815589.0247574-CDS-S-ischiensis_contig11:403470..403497Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 403471..403497 +
1695739788.1102834-CDS-S-ischiensis_contig11:403470..4034971695739788.1102834-CDS-S-ischiensis_contig11:403470..403497Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 403471..403497 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2009.1

>prot_S-ischiensis_contig11.2009.1 ID=prot_S-ischiensis_contig11.2009.1|Name=mRNA_S-ischiensis_contig11.2009.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=233bp
MAHRAPSTAGRALTCAIRRCRAAPPVVRSLHTKRPAEHGFRHRGTWSTRR
NWRCGVWSQRYGQRQGQDRRFSSEPDSDDADPGGPPPPMHSNVAQGPSEK
VIRLCDEIVSLNVIEVSQLTKLYKERLGIPDTPMMPMGMMPQMGAAPAAG
GEAEAEEAAPEKTVFDVKLTGFSDKSKIKVIKEVRAITGLGLKEAKELVE
GVPKTIKKEVKKEEAEEIEKQLKDVGGEVTLA*
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mRNA from alignment at S-ischiensis_contig11:396121..403682+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2009.1 ID=mRNA_S-ischiensis_contig11.2009.1|Name=mRNA_S-ischiensis_contig11.2009.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7562bp|location=Sequence derived from alignment at S-ischiensis_contig11:396121..403682+ (Schizocladia ischiensis KU_0333)
GAGTCATGGCACATCGGGCCCCTTCCACCGCTGGCCGAGCACTGACTTGT
GCAATCCGTAGATGTCGAGCCGCTCCTCCAGTGGTGCGCTCTCTCCACAC
CAAAAGGTACGCGGCGTTTTTTTTTGTCGGCCAAGCTAGAGCAACTGATG
GAACTGGAGCAGGAATGGTTTGACAACTGGCCCCTCGACCCCCTGAACTG
TTCGCGCTTGCAGACCAGCTGAGCATGGCTTCCGGCACAGGGGAACATGG
AGCACACGCAGGAATTGGCGATGCGGAGTCTGGTCACAGAGATACGGCCA
GCGGCAGGGGCAGGACCGGCGCTTCTCATCCGAGCCCGATTCAGACGACG
CCGATCCGGGTGGTCCGCCTCCTCCCATGCACAGCAACGTCGCACAAGGG
CCCTCGGAGAAAGTGATTCGGCTGTGCGACGAGATCGTGTCCCTAAACGT
GATTGAAGTCTCCCAGCTCACTAAGCTGTATAAGGTAAGTACAGCGCCTG
CAAGCTTGACCCCTGTACTGGAGGACGGTGTAGGGATTGAATATTGGATG
GGTGTACCGAAGCCCTCGAAGGCCGCGGAGGGCTATGAAAGCATATGTTA
CGGCGTGGGCGGCTAAGGAATCTGCCAACGAATAAGATGGCCCCGGACCC
GCTGGTGGGGGTTAACAGCAGTCTCAGCACACGACAACGCACTTTACGAC
ATCCACCGTGTTCATCTGGAGCTTGCGACGCGGAGACGCTTGTCCCTCGG
TTCCCGGAGGGAGGTGCGTTTCCCCCACGGGGTCTTCATGTTTTTAACTG
GCTCCTTGTAGCTCACCCGCTCGTCTGTTGTGACCGTGGCGTCTGCCCGA
ACGCAGGAGAGGTTGGGCATCCCAGACACCCCAATGATGCCCATGGGCAT
GATGCCGCAGATGGGCGCCGCACCCGCGGCCGGGGGCGAGGCGGAGGCGG
AAGAAGCAGCACCAGAGAAAACTGTGTTTGACGTGAAGCTGACGGGCTTC
AGCGACAAGTCCAAGATCAAGGTGGGCGCGGGGCCGTTGATTTGACCCTT
TGTTGAGGACGACGGGGCACTAAACTACGCGAGTTTAGTGTGGGATAAGT
ATAACGTCGTTCCTAATAGCTAATACTAATGTACTTGTGTTGTACTTCAA
GTAGAAATGTAGCAATGTGTTTGCTACGGTGCGCTCTTCAAGAAGGCCCT
GATAGGTAACGGGAGGTTTGAATGCCCAAGTGCTTCGAAGTGCTACGTGC
ACATACCCCTAGTACGGATTGCCGCATCCATTCGGGAGTGCCTTCTTCTC
ATGGCCCGCGATTTTTTCCCTGAGATTAGGCCTCGCGAAAAGCCATTTCT
TCCTTGGGACATATGAGCCTGGTCAGGTAAGAATGTGCGTACTTCCGCTG
TTACAAGCTGGTTCGGGTAAAACGGCCCAGAAGCCTTCCGCACGCGAAAT
ATCGAGAAGACAACAAGTTGAGGGAAGCTGCGCGCACCAAAATGGTCCCA
CGGATGAGACGAAGAGATCAATGTGCTCGGTGTGTCCCGGCGCAAGGTGT
GTGTCGCGTAATGCAGACTTCGCCGCCGCCCGGGTTCTCATATTGGTGGA
GGCGTCGCTCGCCCAGGCCTCCTTAACTATAGGGGTTTAGTGTGGGAGCA
CCTATCGAAGCACTTAGATGTCTTATCACAAAATCTCACGGCGATTTTGC
GAGTTCAACCAATCGACTTTCATGTCGATGGAACTGGACCATGAGGAGCA
ATCGTATGGGACATTTTTGGATTTTGGTTTTCTCAACGAGATGTCAGGCC
CACAAGAATCTCCGGTGTACCTGTAAAGCATTGATACTGATGAAAAAAAT
GAAAAATAAAACGTCCCTCCATACGAACCCTAGCCGCGCCCCTAATGCCA
AGTATTTGCCCCTGCTGTACTCATATAATTGTACTTTGTATTTCGCGTGA
AAGGGCGGTCCACTGTTGGGTTTCTCAGTGGCGTGGACCACGCCTCGCTC
GGTATTGTTTCCTTGTTGCTTAGCCCTGCTTCCCGGCATGATGTGTGATT
CATATATATATATATACCACGTGAGTATATATATACTACGTAGTATACGA
GTATATATATATATATATCTCGGCGTGATGTGGTGTGATTCATATAAATT
GTAGTGAGGTACAATCGCGCGTGTGTGAGATTGACTGTTCTGTGGTTTGG
GGTGGCACGAACAATTTGCACTCGCGAGCAGGTTATCAAGGAGGTGCGGG
CTATCACGGGGTTGGGCCTGAAGGAGGCCAAGGAGCTCGTGGAGGGCGTG
CCAAAGGTGAGCCGGGCAAGTCGCCCGCGATGTTGACTGCAGAGCTACCA
TACGGTACTGTACTACTACTACTACTACTACTACTACTACTACTACTACT
ACTGCTACTGCTACTCGAGTACTACTGCTACTACCGCTACTACTACTACT
GCTCCGCCTCGAACGAGGCGCGGGGTCAATGGTCTCGGGACCACATGAGT
ACATATGCTACTACTACTGTACTACGAGTACTACTACTACTACTACTACT
ACTACTACTACTACTACTACTACTACTACTACTACTACTACCACCACCAC
CACTACTACCACTGTTTACATGGGGACCGACCTGGGTCAGCACGGAGTAT
AGTGGCTCGAGTTGGTGGCAGCACAGGGTGGGACCCCCATCCGCCATGAG
TACACTACTCCTACTACTACTACTACTACCACTACTACTACTACTACTCA
AGTACTCTACCTGCTCCGTCTCGACCGAGGCGCGTGGTCAACGGTCTCGG
GACTACGGCAAGCACCACGTGAGTACATATATATGCTCAAGTACTCCACG
TAGTTCGAGTAACAAGCAATACACAAGGCCGTACCGTTGGCCAGTGGCAT
GAGAGAGAGGAGTGTCGTGGAGGGCGCCAAGCCAACCTGCGTTCCCCACC
GTGCCGGCCCGGGAACAGAGCCACCTGTCAGGGCGATTTTCCCAGCAGTG
TGGGTGGTTTCGGGCACGAGCAGCTGCGGGTTGGCGGCGGGGCCAGCCCT
CGGCGGTCGGGGCGCGTGGGGTGCCTGCATGATGCTGTGCAAGTATTTTT
TTCTGAGCTCTGTATGCCATTAGGCCCGGGAACGGCCCCGTTGCCGGCTC
TTCGTAGGTAGGGCTGATACCAGTAGGCCGGCCCGGTGTCCCTCGTGTTT
AAACGACGAATAGTTAAGTGTATTGCCGCTTGGGTTAGGGTTAGGGTTAG
GGTTACATATATATATTATATATTGCCGCTTGGGGCGGGAGGGAGAATTC
TCCGTCGTCGACGGCGCGTGTTCAATGGTCTCGGGACTGCGGCAAGCACA
ACATGAATACATACTTCGTACTTCTACTGCATATATATATATTTTGCCGG
GAATCAAGTCGTGAAAATTTATGCTTCGTCGCCGCTGCCGGACGTTTAGG
GTCTCAAGCATGCCGTGTCAAGCATCACTCCGCAAGTACACTCCGTGAAA
AGTGTGGTTTGTTGCAGCAGGCGAAGGCGTGTCCTGCTGCGGGGACTGAC
GTTTTATTTGTCTCGCCGTTGCCCGCACCCGTGGCGGCAGAAGTCAAAAT
TGGCCTAAAAACGGCCTTGCCCGGCCGTTCTTGGGGACCCAGCCAGTACC
GGAGAACGTCAGTGCCTCAGGATGAACCCATTCCTATTGGTTGTGCGGTG
CAATGGGGCGTTTGTGTATGACACCACGACCAAGCCGTGAGTTAGGATGC
TCGGTCTTAACCCTTTTCCCCCTGGGGTCCGTATAATCATAGGGTTTTAG
TGTGTAAATCCAATTTACCAGGGGCAAAAGGGTTAAAGTGAATAGTGCCA
AAATAGTTGGTAATGTCCGGAAGGCGGTGTCACGGACGGTTTTGGTGGGG
GACAGGATCACCGGTGTTGGCTGTCAAATCCCCACCCCTAGCCGTTGCTG
CTGGTGATTGACTACAGCAGAGGCCCGGTTCCATCGAGGCTCTTTTTGTC
TGGGATCTGCCAGTCCCGGCCTAGTTGGCGTGCGAGAGTCCGTGGATCAA
TAGCTGCTCCTGTCGGAGGGTATTCTTCACTAACCCATAGGGCTGTCGGC
TAGGCAAGACAAGCCAATGAGTACATACAGACTTCCAAGTATATATATAT
ATATGTACTCACGTGGTGCTTGCCGTAGTCCCGGGACCATTGACCCCACG
CCTCGTTCGAGGCGGAGCAGTGTATGCCAGGGAAATTCGGGCAACTACTG
CTAGTTTTTAATCAGAGGCATTGTGCTTACCACTATGTACAGAGTACTGC
TGTTGGAGCTGTGAACTGGCAGCTGTAACCGGTGTAACTGGAACACCGGT
TTGACCCGTTTCTGTTTCGGTGCAATTAGCAGGTTTCCCGGCTAGTTTGT
CGATGACGGCGAGTTTCCCCCAGATATTGGCAATATCCGTAATGTCGCCG
TGCAACGGCTACCTGGTACGGCCAAACATGCTCGATTTCAACGGGGAAAA
GAACGGAAAACAATGGCAAGCCTTGGGCCGGTCAACCGGTGCTTTGTAGC
CATTTCCTGTGCTTTGCCCTACTTTGAAGTGCCTACCTGGTGTGCACAGT
GTACAGTACTTACGATAGGTGAGCACTGTGAGCCATCTTGAAGGCGCAAA
GTCCTAGTCAGTGGTCTCGGGACTACTCTAGGAACGGCAAGCTTTGCACA
TTGTGAGTGCAGTACATACTACATACTGGTGCACACACCTCTCTCTATCT
ATATAGGCGTGTGTGATCACGATATGCTTGCGTAGTCCCGAGACCATTGA
CCACGCACAGATACATACTGAAGTGTATTTTATACTTCGAAGTACGAGTA
CTCGTACATTCTTTTATCATCAACATATTTCGAAGTACATGTACGAGTAC
GAGTACATTATTTTCTCATGAATGTGCCACGCCCCTCACCTTTGCCGCCG
TCTGTGTCCTTCTTGGTGGCGCCGCGCCGTGCCTGCTTAACCGGGCGGCG
ATGGCGGCGACTGTGGCGGCGCGCCCCCTTTTGCTGCGCACCCAACCAAG
ACTATCAAGAAGGAGGTGAAGAAGGAGGAAGCTGAGGAGATTGAGAAGCA
GCTCAAGGACGTGAGTCTCCCCCCCGCCAGTGATGGAACATCGATCAGTA
GACAGCTATTGGGCTCGACTGATTTTGTGGGTGGCGTTACTAACTACTTG
GATTTAGCGTGGGTCAAACTATCGAATATTGACTATCGATAGATATATAG
ATCGGTACTGTCGATAAATAGGTTGATTTGCTTAGATATTCCATCACTGC
CCTCCGCCCTCCCCCCTCCCCCGGTGTTCCCTGCCTGTAGACGGGCAAGA
GAATTGCGGGAGCTCTTGTCCGTACTATTTGGTAGTGACATCGGCATGCT
CCGCCCCGGCCTACCTAGTTGGGATGCGAGAGTCCATGGCTAAATAGCTG
CTCCTGTCGGAGGGCAAACCCGAAGTTTCGACTACGGCTGTCGGCAATGC
ATGCAAGGTTATGTCGCAAGACGAGCCAACGAGTACTCCGAAGTGCGTAT
GTATTTCGACTTGCGGCTGTCGGCAATGCACGCAAGGTTATGTCGCAAGA
CGAGCCAATGAGTACATATATGTATATACTACGTAGTGTATACTCGTATA
TAAAGTATATATGCACGGCTACCCTGCAGCCTGCAGGGCTGATCGGTGGT
CCAGCATGGCGTATACTGGGCCGACGGTCGGTGGCATGGACAGGACACGG
GGTATCAGCCACCCTGTCATAAATATATATACATGTATGCGCTCGGACTA
AATGGACGTTGACTCTTGTCTTGAGTACCTATCGTACCTGCCTACTGTCG
CTGGGTTGTGTCGTGCATGGCTAGTGGTCCATAACACAGTGCGACCCTCC
CGCAGCAGTTTTTGTGCTGTTCTGCACTGCACTGGTCTGTACTTGGAAGT
ACCTCTTTTGGCCTACTTGGCCTCGTAGGCACACGGGCCCCAGTCAGACC
GGGCTGGAGCATTTAGTTTGCACCCTATGTTCTGGTGCGTTTCACGGGGG
CAAGTCGAGCACGGCGAAGCCGGTATGGACTGACGTGGGGATGGCAAGTC
TGATGATGTTGCTTGTAAGATCACCCTTAGCGAGGATTACGGTACTTGAC
ACTATGTACTGTACTGTTAATCCCTCTACTACATACACTTTGTGGTACTC
GAGTACTGTACGTATTTTTCATGCACTGTCATCGTCTATGGGCATTGGTG
GGGAGTATCATGTGCTTCAAAGTATTGCTTCTGGCGTGTGCACGGGTGGG
GGTGGGGCTCCCGCCCTGGCTTACCAGCCTGGGACGGGAAGGGTTGCTCC
GAGCTTGAAGAGGGAAGGGGCATCATCAGCGCACGGTCAAGTGGTCTTTT
TCTACTCCAAGTACCACAATGAGAGAAAAGCGAGCGAGTTGTGGTCCACT
TGGCGAGTGGTCTCTTCAGCGGTGCTCGTACGGTAATACCTTCCTTCCTC
GCACCCAGAAGGCCAGTCAGAGGGGGAGGGGACGCGCGCTGTACTCGTCT
TTGGGGTAGAGTAGACGCAGGTTTGCATGCTGCACGGACTTTCTGCGGGC
TTCGGCCGGCTCGCGACGTATGGTATGTTCTGCGCGTGCGGTCACGTCGG
ACAGAGAGCTCCTGTATCCTGTGCGTGCCATGTTATACTACTAGTACACC
CGTGCAGCACTTGCTGTGTTCTTGTATGTACGTACTCATAGTATGGTAGG
TGTTGTAAGGGAGAAAGCGAGCCTGCTTCGTCTCGGTCGAGGCGCGTGGT
CAATGTGCTGGACCTTGGTCTGCATTGCCCAAGCACAGTGCTTCCAGCAA
CACCATGACAGACAAGTGGAGAGGCTGACTGTGCAGCGGAGCGGGCAGTC
TCTCCAACCCAGCCTCAGCGAGGAAACACTTCTTTGCTAGTATAGGAACA
CTCAATTCTTAAATGGGACAACTGCTAATACGAGAACAGTCAATCTCACA
CACCTGCGATTGTAAGTACCTTGTTACAGTTTATATGAATCACCACTTTC
TTTGCTTTACAGTCCCCCTCATCCCCGCATGGGACACCGCGGCGGTCAGT
GGCCGTGCACAAGGGGCCTTGTTGGGCAAGCCGCTCATGACCAAGGCATA
TACCCCTGACCCCGCCTTCTTAAGTGGGACAACTACTAATACGAGAACAG
TCAATCTCACACGCATTCGATTGTACTCGAGTACCTCGTTACTCGTACAA
TTTATATGAGTCACCCCTGACCCTGCCCCATGCCTCTGCTTGGCTCTGCC
CTGCTCTGCCCCGCCTGCCCGCCCGCCGCTGCCGGATTGCTCGCTCACAG
GTGGGCGGCGAAGTCACCCTGGCGTAGCGTTTCTTTCCCATTGCCGTCAC
CATCTGCTACTTAGCTGGGTGCTTGGGGCCCACAGATTTACGACATCGTA
CAAGTAGGAAGTAGGGCTTCAGTTATGAGCACGAGCACAAGAGGTGGTCT
CGGACAGCGACCTTCACGTGCATGCATGCATGCACGCATGCATGCACGCC
TTGCGGCCCACC
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:396121..403682+

>mRNA_S-ischiensis_contig11.2009.1 ID=mRNA_S-ischiensis_contig11.2009.1|Name=mRNA_S-ischiensis_contig11.2009.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1398bp|location=Sequence derived from alignment at S-ischiensis_contig11:396121..403682+ (Schizocladia ischiensis KU_0333)
ATGGCACATCGGGCCCCTTCCACCGCTGGCCGAGCACTGACTTGTGCAAT
CCGTAGATGTCGAGCCGCTCCTCCAGTGGTGCGCTCTCTCCACACCAAAA
GATGGCACATCGGGCCCCTTCCACCGCTGGCCGAGCACTGACTTGTGCAA
TCCGTAGATGTCGAGCCGCTCCTCCAGTGGTGCGCTCTCTCCACACCAAA
AGACCAGCTGAGCATGGCTTCCGGCACAGGGGAACATGGAGCACACGCAG
GAATTGGCGATGCGGAGTCTGGTCACAGAGATACGGCCAGCGGCAGGGGC
AGGACCGGCGCTTCTCATCCGAGCCCGATTCAGACGACGCCGATCCGGGT
GGTCCGCCTCCTCCCATGCACAGCAACGTCGCACAAGGGCCCTCGGAGAA
AGTGATTCGGCTGTGCGACGAGATCGTGTCCCTAAACGTGATTGAAGTCT
CCCAGCTCACTAAGCTGTATAAGACCAGCTGAGCATGGCTTCCGGCACAG
GGGAACATGGAGCACACGCAGGAATTGGCGATGCGGAGTCTGGTCACAGA
GATACGGCCAGCGGCAGGGGCAGGACCGGCGCTTCTCATCCGAGCCCGAT
TCAGACGACGCCGATCCGGGTGGTCCGCCTCCTCCCATGCACAGCAACGT
CGCACAAGGGCCCTCGGAGAAAGTGATTCGGCTGTGCGACGAGATCGTGT
CCCTAAACGTGATTGAAGTCTCCCAGCTCACTAAGCTGTATAAGGAGAGG
TTGGGCATCCCAGACACCCCAATGATGCCCATGGGCATGATGCCGCAGAT
GGGCGCCGCACCCGCGGCCGGGGGCGAGGCGGAGGCGGAAGAAGCAGCAC
CAGAGAAAACTGTGTTTGACGTGAAGCTGACGGGCTTCAGCGACAAGTCC
AAGATCAAGGAGAGGTTGGGCATCCCAGACACCCCAATGATGCCCATGGG
CATGATGCCGCAGATGGGCGCCGCACCCGCGGCCGGGGGCGAGGCGGAGG
CGGAAGAAGCAGCACCAGAGAAAACTGTGTTTGACGTGAAGCTGACGGGC
TTCAGCGACAAGTCCAAGATCAAGGTTATCAAGGAGGTGCGGGCTATCAC
GGGGTTGGGCCTGAAGGAGGCCAAGGAGCTCGTGGAGGGCGTGCCAAAGG
TTATCAAGGAGGTGCGGGCTATCACGGGGTTGGGCCTGAAGGAGGCCAAG
GAGCTCGTGGAGGGCGTGCCAAAGACTATCAAGAAGGAGGTGAAGAAGGA
GGAAGCTGAGGAGATTGAGAAGCAGCTCAAGGACACTATCAAGAAGGAGG
TGAAGAAGGAGGAAGCTGAGGAGATTGAGAAGCAGCTCAAGGACGTGGGC
GGCGAAGTCACCCTGGCGTAGGTGGGCGGCGAAGTCACCCTGGCGTAG
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