prot_S-ischiensis_contig108.1925.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig108.1925.1
Unique Nameprot_S-ischiensis_contig108.1925.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length216
Homology
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BLAST of mRNA_S-ischiensis_contig108.1925.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 4.890e-30
Identity = 66/125 (52.80%), Postives = 85/125 (68.00%), Query Frame = 0 
Query:   74 IPLPPPSTRHRYTIDKRERLVRADLS--GVRFVEQVDKEYILRLFEQPDVTVVIKGLAGGLNPLLWSWSYIAERCSQTMYHSFRRFSR--AAPGHPFIEDPDRHRGWVSMEISEYARYLSARAEA 194
            IP PP +T H+Y ID + RLVRAD S  G R ++ +D+ Y+L LFE+PDVTVVI GLA GL+P LW+  Y+ ERC + MYHSFRRF+R   A   PF+  P R   W SM + +Y RYL+  A+A
Sbjct:   12 IPGPPAATAHKYRIDMKNRLVRADFSKSGAR-IDPLDEAYVLGLFERPDVTVVINGLANGLDPHLWNTRYLNERCGEMMYHSFRRFTRPGGARRGPFVPIPVREEAWSSMRLRDYVRYLNKLADA 135
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BLAST of mRNA_S-ischiensis_contig108.1925.1 vs. uniprot
Match: A0A7S2B8L6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B8L6_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.910e-16
Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 0 
Query:   86 TIDKRERLVRADLSGVRFVEQVDKEYILRLFEQPDVTVVIKGLAGGLNPLLWSWSYIAERCSQTMYHSFRRF--SRAAPGHPFIEDPDRHRGWVSMEISEYARYLSARAEA 194
            T+D   R+VR D++G   ++  D +Y+ RL +QPDVT+++KGL  GL P LWS  Y+  RC   M H  R F  SR       +E       W SM +++Y  YL AR +A
Sbjct:    1 TVDPVNRVVRMDMAGKPCLDPDDDDYLHRLLDQPDVTLIVKGLGDGLTPHLWSEPYLKSRCGDLMLHKLRCFRGSRNKCAQDSVETE-----WKSMRLNDYMGYLEARQKA 106
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig108.1925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCL4_ECTSI4.890e-3052.80ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2B8L6_9STRA1.910e-1639.64Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig108contigS-ischiensis_contig108:167644..170951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig108.1925.1mRNA_S-ischiensis_contig108.1925.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig108 167644..170953 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig108.1925.1 ID=prot_S-ischiensis_contig108.1925.1|Name=mRNA_S-ischiensis_contig108.1925.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=216bp
RNENRKRIPKDEPEFVLRGTRQNLKRRKGTFPNASQCRRAVNRGRVGQDG
GPDVASDDDMAAANPAPPPPLEPIPLPPPSTRHRYTIDKRERLVRADLSG
VRFVEQVDKEYILRLFEQPDVTVVIKGLAGGLNPLLWSWSYIAERCSQTM
YHSFRRFSRAAPGHPFIEDPDRHRGWVSMEISEYARYLSARAEALQNPPV
IAGGSPDPAPTTAATT
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