prot_S-ischiensis_contig107.1906.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig107.1906.1
Unique Nameprot_S-ischiensis_contig107.1906.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length173
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig107.1906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 45..77
e-value: 4.4
score: 16.3
coord: 11..43
e-value: 60.0
score: 9.7
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 105..131
e-value: 8.1E-4
score: 19.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 99..132
score: 8.998
NoneNo IPR availablePFAMPF14559TPR_19coord: 10..72
e-value: 3.4E-6
score: 27.5
NoneNo IPR availablePANTHERPTHR44917FAMILY NOT NAMEDcoord: 2..147
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 6..150
e-value: 4.7E-19
score: 70.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 10..130
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 11..132
score: 16.368

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig107contigS-ischiensis_contig107:170379..175118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig107.1906.1mRNA_S-ischiensis_contig107.1906.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig107 170379..175118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig107.1906.1 ID=prot_S-ischiensis_contig107.1906.1|Name=mRNA_S-ischiensis_contig107.1906.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=173bp
AWAKVEDQLAGDYARAKQLLDEALADDSTDVKVHVARAALEMRRGNAARA
REILSDAADLPQKEAQLFNMWATLETREGNLQTALQILRAASARFPLDQT
LLQTQGTVQARLGNHKAAIDCYRKSIEIRPAAPAFVAWALLEGAQAAAAG
AGAKQGGGGGGAGAAVVPGEEGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom