prot_S-ischiensis_contig106.1883.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig106.1883.1
Unique Nameprot_S-ischiensis_contig106.1883.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length226
Homology
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BLAST of mRNA_S-ischiensis_contig106.1883.1 vs. uniprot
Match: T1E7B4_CROHD (Androgen-dependent TPF1-regulating protein n=4 Tax=Crotalinae TaxID=8710 RepID=T1E7B4_CROHD)

HSP 1 Score: 53.1 bits (126), Expect = 6.820e-5
Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 0 
Query:   84 LSFASSTTMTVIFWSLFLFDKRLIIP---DTFTEDVLPLGLNLLLHLWPLAALLLDLAAVPHPPGPLGQQLIWITVYAFGHSASQVGEFLATGGWPYPFMKYFSAGHYVGLIV 193
            L F  ST + V FWS++L+D+ LIIP   D+   + +  G++ L+  +PL   L+++  VPH    +G+ L  + +   G+    +  F  TG W YPF ++ S    +G+IV
Sbjct:   96 LVFPFSTFVIVSFWSIYLYDRELIIPKSMDSLFSEWINHGMHTLV--FPLG--LVEMVVVPHQYSSVGKSLSILGMTGLGYQLWVLYYFAKTGKWLYPFFEFLSP---LGIIV 201
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig106.1883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
T1E7B4_CROHD6.820e-532.74Androgen-dependent TPF1-regulating protein n=4 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006838FAR-17a/AIG1-like proteinPFAMPF04750Far-17a_AIG1coord: 84..209
e-value: 3.5E-15
score: 55.9
IPR006838FAR-17a/AIG1-like proteinPANTHERPTHR10989ANDROGEN-INDUCED PROTEIN 1-RELATEDcoord: 5..213
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..150
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 174..184
NoneNo IPR availableTMHMMTMhelixcoord: 7..24
NoneNo IPR availableTMHMMTMhelixcoord: 82..101
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 183..205
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig106contigS-ischiensis_contig106:207078..208354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig106.1883.1mRNA_S-ischiensis_contig106.1883.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig106 207007..209202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig106.1883.1 ID=prot_S-ischiensis_contig106.1883.1|Name=mRNA_S-ischiensis_contig106.1883.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=226bp
MCRVTVVWHALLCASMMAGWAWLWKQGLMGPLLASKFTIWNWCVVSLHFV
LSCWGGVSLCLNSRREGGGVNSPSEGLVAKTFHLSFASSTTMTVIFWSLF
LFDKRLIIPDTFTEDVLPLGLNLLLHLWPLAALLLDLAAVPHPPGPLGQQ
LIWITVYAFGHSASQVGEFLATGGWPYPFMKYFSAGHYVGLIVVGAALAV
GGLMLSRMLASARASLAEKGHNKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006838Far-17a_AIG1